EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000003087 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 7622 bases
Position: chr4:2794860-2802481
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000004271	MMR_HSR1	PF01926.23	4.3e-06	1	1
ENSAPEP00000004294	MMR_HSR1	PF01926.23	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000004387	-	2338	-	ENSAPEP00000004271	162 (aa)	-	-
ENSAPET00000004412	-	2218	-	ENSAPEP00000004294	180 (aa)	-	UPI000C311336
ENSAPET00000004422	-	471	-	ENSAPEP00000004304	156 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000003087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000003087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000003087	-	100	88.889	ENSAPEG00000024614	arf5	100	88.889
ENSAPEG00000003087	-	91	33.557	ENSAPEG00000023154	arl8a	89	32.530
ENSAPEG00000003087	-	95	40.462	ENSAPEG00000016770	arl3l2	93	40.462
ENSAPEG00000003087	-	94	41.011	ENSAPEG00000020063	ARL6	96	41.011
ENSAPEG00000003087	-	100	77.160	ENSAPEG00000016302	arf3b	98	78.531
ENSAPEG00000003087	-	91	34.899	ENSAPEG00000022867	arl8bb	89	33.735
ENSAPEG00000003087	-	98	45.198	ENSAPEG00000000995	arl5a	100	45.455
ENSAPEG00000003087	-	89	30.857	ENSAPEG00000019680	-	87	30.857
ENSAPEG00000003087	-	91	42.945	ENSAPEG00000014648	-	90	42.945
ENSAPEG00000003087	-	97	45.977	ENSAPEG00000015271	arl8	97	45.977
ENSAPEG00000003087	-	91	45.399	ENSAPEG00000023428	arl3	92	45.399
ENSAPEG00000003087	-	100	42.222	ENSAPEG00000002699	arl5c	100	42.222
ENSAPEG00000003087	-	87	46.914	ENSAPEG00000000558	arl4aa	81	46.914
ENSAPEG00000003087	-	98	34.392	ENSAPEG00000003601	arfrp1	93	34.392
ENSAPEG00000003087	-	88	45.455	ENSAPEG00000017251	-	82	45.455
ENSAPEG00000003087	-	91	34.899	ENSAPEG00000002399	arl8ba	89	33.735
ENSAPEG00000003087	-	100	63.889	ENSAPEG00000002838	-	100	63.889
ENSAPEG00000003087	-	82	33.083	ENSAPEG00000022771	sar1b	67	33.083
ENSAPEG00000003087	-	98	57.627	ENSAPEG00000013187	arl1	98	57.627
ENSAPEG00000003087	-	92	41.176	ENSAPEG00000012838	-	88	41.176
ENSAPEG00000003087	-	89	30.857	ENSAPEG00000011525	sar1ab	87	30.857
ENSAPEG00000003087	-	92	46.784	ENSAPEG00000019862	arl4cb	89	46.784
ENSAPEG00000003087	-	99	46.667	ENSAPEG00000020786	arl2	96	46.667
ENSAPEG00000003087	-	98	81.356	ENSAPEG00000003390	arf2b	98	81.356
ENSAPEG00000003087	-	84	43.791	ENSAPEG00000007983	arl11	66	43.791
ENSAPEG00000003087	-	100	77.160	ENSAPEG00000002821	-	98	78.531
ENSAPEG00000003087	-	80	31.034	ENSAPEG00000012105	rab1ba	70	30.822
ENSAPEG00000003087	-	96	80.814	ENSAPEG00000016909	-	96	80.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000003087	-	99	86.034	ENSG00000004059	ARF5	100	86.184	Homo_sapiens
ENSAPEG00000003087	-	100	94.444	ENSAPOG00000000667	-	100	94.444	Acanthochromis_polyacanthus
ENSAPEG00000003087	-	99	86.034	ENSAMEG00000004635	ARF5	99	86.034	Ailuropoda_melanoleuca
ENSAPEG00000003087	-	98	67.797	ENSACIG00000014610	zgc:110286	98	67.797	Amphilophus_citrinellus
ENSAPEG00000003087	-	100	93.889	ENSACIG00000000467	-	100	93.889	Amphilophus_citrinellus
ENSAPEG00000003087	-	99	88.827	ENSACIG00000005843	arf5	99	88.827	Amphilophus_citrinellus
ENSAPEG00000003087	-	100	88.889	ENSAOCG00000023329	arf5	100	88.889	Amphiprion_ocellaris
ENSAPEG00000003087	-	100	100.000	ENSAOCG00000008113	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000003087	-	100	95.000	ENSATEG00000001302	-	100	95.000	Anabas_testudineus
ENSAPEG00000003087	-	99	88.268	ENSATEG00000003053	ARF5	99	88.268	Anabas_testudineus
ENSAPEG00000003087	-	99	86.034	ENSANAG00000026446	ARF5	99	86.034	Aotus_nancymaae
ENSAPEG00000003087	-	100	93.889	ENSACLG00000025604	-	100	93.889	Astatotilapia_calliptera
ENSAPEG00000003087	-	99	89.385	ENSACLG00000005705	arf5	99	89.385	Astatotilapia_calliptera
ENSAPEG00000003087	-	99	88.268	ENSAMXG00000038224	-	99	88.268	Astyanax_mexicanus
ENSAPEG00000003087	-	99	87.709	ENSAMXG00000031774	ARF5	99	87.709	Astyanax_mexicanus
ENSAPEG00000003087	-	99	87.709	ENSAMXG00000004249	-	99	87.709	Astyanax_mexicanus
ENSAPEG00000003087	-	99	86.034	ENSAMXG00000031467	arf4a	99	86.034	Astyanax_mexicanus
ENSAPEG00000003087	-	99	86.034	ENSBTAG00000009366	ARF5	99	86.034	Bos_taurus
ENSAPEG00000003087	-	99	83.240	WBGene00000183	arf-3	99	83.240	Caenorhabditis_elegans
ENSAPEG00000003087	-	99	86.034	ENSCJAG00000017604	ARF5	99	86.034	Callithrix_jacchus
ENSAPEG00000003087	-	94	87.582	ENSCAFG00020021629	ARF5	99	72.300	Canis_lupus_dingo
ENSAPEG00000003087	-	99	86.034	ENSCHIG00000018906	ARF5	99	86.034	Capra_hircus
ENSAPEG00000003087	-	99	84.444	ENSCPOG00000006239	ARF5	99	84.444	Cavia_porcellus
ENSAPEG00000003087	-	99	86.034	ENSCCAG00000027943	-	99	86.034	Cebus_capucinus
ENSAPEG00000003087	-	99	86.034	ENSCATG00000010217	ARF5	99	86.034	Cercocebus_atys
ENSAPEG00000003087	-	99	86.034	ENSCLAG00000007930	ARF5	99	86.034	Chinchilla_lanigera
ENSAPEG00000003087	-	99	86.034	ENSCSAG00000010208	ARF5	99	86.034	Chlorocebus_sabaeus
ENSAPEG00000003087	-	100	74.444	ENSCING00000004846	-	100	74.444	Ciona_intestinalis
ENSAPEG00000003087	-	100	72.527	ENSCSAVG00000001959	-	100	72.527	Ciona_savignyi
ENSAPEG00000003087	-	89	85.000	ENSCANG00000037234	ARF5	98	85.000	Colobus_angolensis_palliatus
ENSAPEG00000003087	-	99	86.034	ENSCGRG00001024919	Arf5	99	86.034	Cricetulus_griseus_chok1gshd
ENSAPEG00000003087	-	99	83.240	ENSCSEG00000006004	arf5	99	83.240	Cynoglossus_semilaevis
ENSAPEG00000003087	-	100	93.333	ENSCVAG00000011381	-	100	93.333	Cyprinodon_variegatus
ENSAPEG00000003087	-	99	89.385	ENSCVAG00000007314	-	99	89.385	Cyprinodon_variegatus
ENSAPEG00000003087	-	99	89.385	ENSCVAG00000009124	ARF5	99	89.385	Cyprinodon_variegatus
ENSAPEG00000003087	-	99	70.000	ENSDARG00000074210	ARF5	88	70.000	Danio_rerio
ENSAPEG00000003087	-	99	88.268	ENSDARG00000113899	zgc:77650	99	88.268	Danio_rerio
ENSAPEG00000003087	-	99	85.475	ENSDARG00000045989	arf4a	99	85.475	Danio_rerio
ENSAPEG00000003087	-	99	88.268	ENSDARG00000070472	arf5	99	88.268	Danio_rerio
ENSAPEG00000003087	-	99	86.034	ENSDORG00000000325	Arf5	99	86.034	Dipodomys_ordii
ENSAPEG00000003087	-	99	83.240	FBgn0013749	Arf102F	99	83.240	Drosophila_melanogaster
ENSAPEG00000003087	-	97	82.184	ENSETEG00000009275	ARF5	99	82.184	Echinops_telfairi
ENSAPEG00000003087	-	99	72.067	ENSEBUG00000004484	-	99	72.067	Eptatretus_burgeri
ENSAPEG00000003087	-	99	83.240	ENSEBUG00000014420	-	99	83.240	Eptatretus_burgeri
ENSAPEG00000003087	-	99	73.743	ENSELUG00000014428	arf4	99	73.743	Esox_lucius
ENSAPEG00000003087	-	99	86.034	ENSFCAG00000005482	ARF5	99	86.034	Felis_catus
ENSAPEG00000003087	-	99	88.827	ENSFHEG00000023119	arf5	99	88.827	Fundulus_heteroclitus
ENSAPEG00000003087	-	99	85.475	ENSGMOG00000019109	-	99	85.475	Gadus_morhua
ENSAPEG00000003087	-	99	86.034	ENSGMOG00000008747	arf5	99	86.034	Gadus_morhua
ENSAPEG00000003087	-	100	91.111	ENSGAFG00000005163	-	100	91.111	Gambusia_affinis
ENSAPEG00000003087	-	99	89.385	ENSGAFG00000018703	arf5	99	89.385	Gambusia_affinis
ENSAPEG00000003087	-	99	90.503	ENSGACG00000000686	arf5	99	90.503	Gasterosteus_aculeatus
ENSAPEG00000003087	-	100	90.000	ENSGACG00000012500	-	100	90.000	Gasterosteus_aculeatus
ENSAPEG00000003087	-	99	86.592	ENSGAGG00000000231	ARF5	99	86.592	Gopherus_agassizii
ENSAPEG00000003087	-	99	86.034	ENSGGOG00000016749	ARF5	99	86.034	Gorilla_gorilla
ENSAPEG00000003087	-	99	89.385	ENSHBUG00000008546	arf5	99	89.385	Haplochromis_burtoni
ENSAPEG00000003087	-	100	93.889	ENSHBUG00000011041	-	100	93.889	Haplochromis_burtoni
ENSAPEG00000003087	-	99	86.034	ENSHGLG00000007494	ARF5	99	86.034	Heterocephalus_glaber_female
ENSAPEG00000003087	-	99	84.916	ENSHGLG00100006040	ARF5	60	84.916	Heterocephalus_glaber_male
ENSAPEG00000003087	-	99	88.827	ENSHCOG00000015577	-	100	88.827	Hippocampus_comes
ENSAPEG00000003087	-	99	70.391	ENSIPUG00000006913	-	70	70.391	Ictalurus_punctatus
ENSAPEG00000003087	-	99	85.475	ENSIPUG00000007016	arf4	99	85.475	Ictalurus_punctatus
ENSAPEG00000003087	-	99	87.151	ENSIPUG00000004159	Arf5	99	87.151	Ictalurus_punctatus
ENSAPEG00000003087	-	99	87.151	ENSIPUG00000004215	arf5	99	87.151	Ictalurus_punctatus
ENSAPEG00000003087	-	99	86.034	ENSSTOG00000002104	ARF5	99	86.034	Ictidomys_tridecemlineatus
ENSAPEG00000003087	-	99	86.034	ENSJJAG00000005105	Arf5	99	86.034	Jaculus_jaculus
ENSAPEG00000003087	-	100	93.889	ENSKMAG00000012816	-	100	93.889	Kryptolebias_marmoratus
ENSAPEG00000003087	-	99	85.393	ENSLBEG00000012002	-	98	85.393	Labrus_bergylta
ENSAPEG00000003087	-	99	88.827	ENSLBEG00000026532	arf5	99	88.827	Labrus_bergylta
ENSAPEG00000003087	-	99	86.034	ENSLAFG00000011469	ARF5	99	86.034	Loxodonta_africana
ENSAPEG00000003087	-	99	86.034	ENSMFAG00000019772	ARF5	99	86.034	Macaca_fascicularis
ENSAPEG00000003087	-	99	86.034	ENSMMUG00000046381	ARF5	99	86.034	Macaca_mulatta
ENSAPEG00000003087	-	99	86.034	ENSMNEG00000040893	ARF5	99	86.034	Macaca_nemestrina
ENSAPEG00000003087	-	99	88.827	ENSMAMG00000021160	arf5	99	88.827	Mastacembelus_armatus
ENSAPEG00000003087	-	100	94.444	ENSMAMG00000008223	-	100	94.444	Mastacembelus_armatus
ENSAPEG00000003087	-	99	89.385	ENSMZEG00005015033	arf5	66	89.385	Maylandia_zebra
ENSAPEG00000003087	-	88	94.937	ENSMZEG00005019741	-	94	94.937	Maylandia_zebra
ENSAPEG00000003087	-	99	86.034	ENSMAUG00000014825	Arf5	99	86.034	Mesocricetus_auratus
ENSAPEG00000003087	-	99	86.034	ENSMICG00000000091	ARF5	99	86.034	Microcebus_murinus
ENSAPEG00000003087	-	99	86.034	ENSMOCG00000022861	Arf5	99	86.034	Microtus_ochrogaster
ENSAPEG00000003087	-	99	86.592	ENSMODG00000015229	ARF5	99	86.592	Monodelphis_domestica
ENSAPEG00000003087	-	100	94.444	ENSMALG00000006020	-	100	94.444	Monopterus_albus
ENSAPEG00000003087	-	99	89.385	ENSMALG00000010117	-	99	89.385	Monopterus_albus
ENSAPEG00000003087	-	99	67.039	ENSMALG00000022638	zgc:110286	100	67.039	Monopterus_albus
ENSAPEG00000003087	-	99	86.034	MGP_CAROLIEiJ_G0028156	Arf5	99	86.034	Mus_caroli
ENSAPEG00000003087	-	99	86.034	ENSMUSG00000020440	Arf5	99	86.034	Mus_musculus
ENSAPEG00000003087	-	99	86.034	MGP_PahariEiJ_G0021914	Arf5	99	86.034	Mus_pahari
ENSAPEG00000003087	-	99	86.034	MGP_SPRETEiJ_G0029156	Arf5	99	86.034	Mus_spretus
ENSAPEG00000003087	-	99	86.034	ENSMPUG00000006675	ARF5	99	86.034	Mustela_putorius_furo
ENSAPEG00000003087	-	99	86.034	ENSMLUG00000017122	ARF5	99	86.034	Myotis_lucifugus
ENSAPEG00000003087	-	99	86.034	ENSNGAG00000011743	Arf5	99	86.034	Nannospalax_galili
ENSAPEG00000003087	-	99	89.385	ENSNBRG00000018854	arf5	99	89.385	Neolamprologus_brichardi
ENSAPEG00000003087	-	99	86.034	ENSODEG00000011800	ARF5	99	86.034	Octodon_degus
ENSAPEG00000003087	-	99	89.385	ENSONIG00000007594	arf5	99	89.385	Oreochromis_niloticus
ENSAPEG00000003087	-	100	93.889	ENSONIG00000014890	-	100	93.889	Oreochromis_niloticus
ENSAPEG00000003087	-	99	86.034	ENSOCUG00000024365	ARF5	99	86.034	Oryctolagus_cuniculus
ENSAPEG00000003087	-	100	92.222	ENSORLG00020001755	-	100	92.222	Oryzias_latipes_hni
ENSAPEG00000003087	-	100	92.778	ENSOMEG00000000211	-	65	92.778	Oryzias_melastigma
ENSAPEG00000003087	-	99	89.944	ENSOMEG00000020821	ARF5	99	89.944	Oryzias_melastigma
ENSAPEG00000003087	-	99	86.034	ENSOGAG00000013336	ARF5	99	86.034	Otolemur_garnettii
ENSAPEG00000003087	-	99	86.034	ENSPPAG00000037755	ARF5	99	86.034	Pan_paniscus
ENSAPEG00000003087	-	99	86.034	ENSPPRG00000004674	ARF5	99	86.034	Panthera_pardus
ENSAPEG00000003087	-	99	86.034	ENSPTRG00000019651	ARF5	99	86.034	Pan_troglodytes
ENSAPEG00000003087	-	99	86.034	ENSPANG00000032970	ARF5	99	86.034	Papio_anubis
ENSAPEG00000003087	-	99	87.151	ENSPKIG00000025381	-	99	87.151	Paramormyrops_kingsleyae
ENSAPEG00000003087	-	99	84.358	ENSPKIG00000025349	arf4a	99	84.358	Paramormyrops_kingsleyae
ENSAPEG00000003087	-	100	86.667	ENSPKIG00000013814	-	100	86.667	Paramormyrops_kingsleyae
ENSAPEG00000003087	-	99	86.034	ENSPMGG00000009985	-	99	86.034	Periophthalmus_magnuspinnatus
ENSAPEG00000003087	-	99	86.034	ENSPEMG00000021476	Arf5	99	86.034	Peromyscus_maniculatus_bairdii
ENSAPEG00000003087	-	99	78.771	ENSPMAG00000009600	arf4a	100	78.771	Petromyzon_marinus
ENSAPEG00000003087	-	99	89.385	ENSPFOG00000015817	arf5	99	89.385	Poecilia_formosa
ENSAPEG00000003087	-	100	90.608	ENSPFOG00000017992	-	100	90.608	Poecilia_formosa
ENSAPEG00000003087	-	100	91.111	ENSPLAG00000015630	-	100	91.111	Poecilia_latipinna
ENSAPEG00000003087	-	99	89.385	ENSPLAG00000006742	arf5	99	89.385	Poecilia_latipinna
ENSAPEG00000003087	-	100	91.111	ENSPMEG00000004624	-	100	91.111	Poecilia_mexicana
ENSAPEG00000003087	-	99	89.385	ENSPMEG00000009605	arf5	99	89.385	Poecilia_mexicana
ENSAPEG00000003087	-	99	86.034	ENSPCOG00000027640	ARF5	99	86.034	Propithecus_coquereli
ENSAPEG00000003087	-	99	86.034	ENSPVAG00000013940	ARF5	99	86.034	Pteropus_vampyrus
ENSAPEG00000003087	-	100	93.889	ENSPNYG00000004931	-	100	93.889	Pundamilia_nyererei
ENSAPEG00000003087	-	99	89.385	ENSPNYG00000001663	arf5	99	89.385	Pundamilia_nyererei
ENSAPEG00000003087	-	99	85.475	ENSPNAG00000004745	arf4a	99	85.475	Pygocentrus_nattereri
ENSAPEG00000003087	-	99	88.827	ENSPNAG00000024427	-	99	88.827	Pygocentrus_nattereri
ENSAPEG00000003087	-	99	72.626	ENSPNAG00000005054	-	99	72.626	Pygocentrus_nattereri
ENSAPEG00000003087	-	99	69.274	ENSPNAG00000004475	-	99	69.274	Pygocentrus_nattereri
ENSAPEG00000003087	-	99	86.034	ENSRNOG00000007806	Arf5	99	86.034	Rattus_norvegicus
ENSAPEG00000003087	-	99	86.034	ENSRBIG00000039868	ARF5	99	86.034	Rhinopithecus_bieti
ENSAPEG00000003087	-	99	86.034	ENSRROG00000041157	ARF5	99	86.034	Rhinopithecus_roxellana
ENSAPEG00000003087	-	99	86.034	ENSSBOG00000021669	ARF5	99	86.034	Saimiri_boliviensis_boliviensis
ENSAPEG00000003087	-	99	86.592	ENSSHAG00000015053	ARF5	99	86.592	Sarcophilus_harrisii
ENSAPEG00000003087	-	99	87.151	ENSSFOG00015020707	ARF5	99	87.151	Scleropages_formosus
ENSAPEG00000003087	-	99	78.771	ENSSFOG00015007701	-	99	78.771	Scleropages_formosus
ENSAPEG00000003087	-	99	88.827	ENSSMAG00000011361	arf5	99	88.827	Scophthalmus_maximus
ENSAPEG00000003087	-	100	90.556	ENSSMAG00000004541	-	100	90.556	Scophthalmus_maximus
ENSAPEG00000003087	-	99	89.385	ENSSDUG00000005105	arf5	99	89.385	Seriola_dumerili
ENSAPEG00000003087	-	99	89.385	ENSSLDG00000017188	arf5	99	89.385	Seriola_lalandi_dorsalis
ENSAPEG00000003087	-	100	93.889	ENSSPAG00000022680	-	100	93.889	Stegastes_partitus
ENSAPEG00000003087	-	99	88.827	ENSSPAG00000014434	arf5	99	88.827	Stegastes_partitus
ENSAPEG00000003087	-	99	86.034	ENSSSCG00000016593	ARF5	99	86.034	Sus_scrofa
ENSAPEG00000003087	-	99	86.592	ENSTRUG00000025462	-	100	86.592	Takifugu_rubripes
ENSAPEG00000003087	-	99	87.151	ENSTNIG00000003348	arf5	100	87.151	Tetraodon_nigroviridis
ENSAPEG00000003087	-	99	83.240	ENSTNIG00000017954	-	100	83.240	Tetraodon_nigroviridis
ENSAPEG00000003087	-	89	86.335	ENSTTRG00000006043	ARF5	99	86.335	Tursiops_truncatus
ENSAPEG00000003087	-	99	86.034	ENSUAMG00000012982	ARF5	99	86.034	Ursus_americanus
ENSAPEG00000003087	-	99	86.034	ENSVVUG00000007062	ARF5	99	86.034	Vulpes_vulpes
ENSAPEG00000003087	-	100	91.111	ENSXCOG00000020384	-	100	91.111	Xiphophorus_couchianus
ENSAPEG00000003087	-	99	89.385	ENSXMAG00000015306	arf5	99	89.385	Xiphophorus_maculatus
ENSAPEG00000003087	-	100	91.111	ENSXMAG00000004558	-	100	91.111	Xiphophorus_maculatus