EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000003231 (Gene tree)
Gene ID: -
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein 48 (U11/U12)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8025 bases
Position: chr7:17994664-18002688
Accession: ZDB-GENE-030131-4482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000004475	zf-U11-48K	PF05253.12	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000004594	-	3415	-	ENSAPEP00000004475	336 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000003231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000003231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000003231	snrnp48	96	42.609	ENSG00000168566	SNRNP48	81	47.687	Homo_sapiens
ENSAPEG00000003231	snrnp48	100	95.858	ENSAPOG00000021430	snrnp48	100	95.858	Acanthochromis_polyacanthus
ENSAPEG00000003231	snrnp48	96	44.253	ENSAMEG00000017349	SNRNP48	82	47.387	Ailuropoda_melanoleuca
ENSAPEG00000003231	snrnp48	96	74.769	ENSACIG00000002032	snrnp48	96	74.618	Amphilophus_citrinellus
ENSAPEG00000003231	snrnp48	100	98.521	ENSAOCG00000010562	snrnp48	100	98.521	Amphiprion_ocellaris
ENSAPEG00000003231	snrnp48	93	79.874	ENSATEG00000020210	snrnp48	95	80.503	Anabas_testudineus
ENSAPEG00000003231	snrnp48	81	48.454	ENSACAG00000002811	SNRNP48	73	51.489	Anolis_carolinensis
ENSAPEG00000003231	snrnp48	96	42.899	ENSANAG00000033538	SNRNP48	81	48.043	Aotus_nancymaae
ENSAPEG00000003231	snrnp48	94	58.307	ENSAMXG00000015309	snrnp48	97	58.204	Astyanax_mexicanus
ENSAPEG00000003231	snrnp48	91	42.090	ENSBTAG00000001123	SNRNP48	77	46.863	Bos_taurus
ENSAPEG00000003231	snrnp48	96	42.899	ENSCJAG00000021330	SNRNP48	81	48.043	Callithrix_jacchus
ENSAPEG00000003231	snrnp48	96	44.348	ENSCAFG00000009574	SNRNP48	67	47.331	Canis_familiaris
ENSAPEG00000003231	snrnp48	96	43.768	ENSCAFG00020013203	SNRNP48	81	47.331	Canis_lupus_dingo
ENSAPEG00000003231	snrnp48	96	42.693	ENSCHIG00000015216	SNRNP48	81	46.479	Capra_hircus
ENSAPEG00000003231	snrnp48	79	48.364	ENSTSYG00000000698	SNRNP48	77	48.699	Carlito_syrichta
ENSAPEG00000003231	snrnp48	86	43.218	ENSCAPG00000006768	SNRNP48	72	51.101	Cavia_aperea
ENSAPEG00000003231	snrnp48	96	43.391	ENSCPOG00000007910	SNRNP48	81	47.331	Cavia_porcellus
ENSAPEG00000003231	snrnp48	96	42.029	ENSCCAG00000035652	SNRNP48	81	46.975	Cebus_capucinus
ENSAPEG00000003231	snrnp48	96	44.058	ENSCATG00000033947	SNRNP48	81	47.687	Cercocebus_atys
ENSAPEG00000003231	snrnp48	92	43.844	ENSCLAG00000003765	SNRNP48	81	48.399	Chinchilla_lanigera
ENSAPEG00000003231	snrnp48	96	42.899	ENSCSAG00000007409	SNRNP48	81	48.043	Chlorocebus_sabaeus
ENSAPEG00000003231	snrnp48	86	45.872	ENSCPBG00000019146	SNRNP48	65	53.333	Chrysemys_picta_bellii
ENSAPEG00000003231	snrnp48	96	42.899	ENSCANG00000030017	SNRNP48	81	48.043	Colobus_angolensis_palliatus
ENSAPEG00000003231	snrnp48	86	39.667	ENSCGRG00001008805	-	74	42.083	Cricetulus_griseus_chok1gshd
ENSAPEG00000003231	snrnp48	96	43.478	ENSCGRG00001001076	-	82	47.163	Cricetulus_griseus_chok1gshd
ENSAPEG00000003231	snrnp48	96	43.478	ENSCGRG00000007781	Snrnp48	82	47.163	Cricetulus_griseus_crigri
ENSAPEG00000003231	snrnp48	77	73.384	ENSCSEG00000000722	snrnp48	89	68.868	Cynoglossus_semilaevis
ENSAPEG00000003231	snrnp48	99	71.006	ENSCVAG00000019829	snrnp48	84	72.340	Cyprinodon_variegatus
ENSAPEG00000003231	snrnp48	95	51.360	ENSDARG00000039989	snrnp48	83	54.965	Danio_rerio
ENSAPEG00000003231	snrnp48	97	42.735	ENSDNOG00000014978	SNRNP48	82	47.387	Dasypus_novemcinctus
ENSAPEG00000003231	snrnp48	96	43.353	ENSDORG00000015140	Snrnp48	81	47.163	Dipodomys_ordii
ENSAPEG00000003231	snrnp48	83	46.875	ENSEASG00005012021	SNRNP48	81	47.163	Equus_asinus_asinus
ENSAPEG00000003231	snrnp48	83	47.222	ENSECAG00000026937	SNRNP48	81	47.518	Equus_caballus
ENSAPEG00000003231	snrnp48	96	30.409	ENSEEUG00000015437	SNRNP48	81	31.338	Erinaceus_europaeus
ENSAPEG00000003231	snrnp48	85	62.153	ENSELUG00000009766	snrnp48	79	61.837	Esox_lucius
ENSAPEG00000003231	snrnp48	83	47.917	ENSFCAG00000018853	SNRNP48	81	48.227	Felis_catus
ENSAPEG00000003231	snrnp48	80	49.320	ENSFALG00000007797	SNRNP48	73	56.466	Ficedula_albicollis
ENSAPEG00000003231	snrnp48	96	43.275	ENSFDAG00000009231	SNRNP48	81	47.331	Fukomys_damarensis
ENSAPEG00000003231	snrnp48	60	84.653	ENSFHEG00000014647	snrnp48	95	78.022	Fundulus_heteroclitus
ENSAPEG00000003231	snrnp48	89	61.950	ENSGMOG00000018599	-	84	68.401	Gadus_morhua
ENSAPEG00000003231	snrnp48	76	51.880	ENSGALG00000013005	SNRNP48	77	55.319	Gallus_gallus
ENSAPEG00000003231	snrnp48	95	73.620	ENSGAFG00000021639	snrnp48	95	73.926	Gambusia_affinis
ENSAPEG00000003231	snrnp48	73	79.268	ENSGACG00000017756	-	96	72.840	Gasterosteus_aculeatus
ENSAPEG00000003231	snrnp48	82	46.104	ENSGAGG00000000865	SNRNP48	68	52.857	Gopherus_agassizii
ENSAPEG00000003231	snrnp48	96	42.899	ENSGGOG00000013220	SNRNP48	81	48.043	Gorilla_gorilla
ENSAPEG00000003231	snrnp48	93	79.747	ENSHBUG00000017066	snrnp48	94	80.435	Haplochromis_burtoni
ENSAPEG00000003231	snrnp48	96	42.319	ENSHGLG00000015241	SNRNP48	81	47.331	Heterocephalus_glaber_female
ENSAPEG00000003231	snrnp48	96	42.319	ENSHGLG00100010027	SNRNP48	81	47.331	Heterocephalus_glaber_male
ENSAPEG00000003231	snrnp48	75	75.099	ENSHCOG00000014066	snrnp48	94	70.031	Hippocampus_comes
ENSAPEG00000003231	snrnp48	96	42.899	ENSSTOG00000014635	SNRNP48	81	48.043	Ictidomys_tridecemlineatus
ENSAPEG00000003231	snrnp48	83	47.902	ENSJJAG00000011495	Snrnp48	81	48.214	Jaculus_jaculus
ENSAPEG00000003231	snrnp48	95	76.471	ENSKMAG00000016514	snrnp48	95	76.161	Kryptolebias_marmoratus
ENSAPEG00000003231	snrnp48	82	77.256	ENSLBEG00000026249	snrnp48	95	77.329	Labrus_bergylta
ENSAPEG00000003231	snrnp48	91	48.297	ENSLACG00000003958	SNRNP48	83	49.823	Latimeria_chalumnae
ENSAPEG00000003231	snrnp48	82	60.000	ENSLOCG00000004187	snrnp48	94	56.347	Lepisosteus_oculatus
ENSAPEG00000003231	snrnp48	79	48.188	ENSLAFG00000011152	SNRNP48	77	48.519	Loxodonta_africana
ENSAPEG00000003231	snrnp48	96	42.899	ENSMFAG00000045216	SNRNP48	81	48.043	Macaca_fascicularis
ENSAPEG00000003231	snrnp48	96	42.899	ENSMMUG00000014785	SNRNP48	81	48.043	Macaca_mulatta
ENSAPEG00000003231	snrnp48	96	42.899	ENSMNEG00000042269	SNRNP48	81	48.043	Macaca_nemestrina
ENSAPEG00000003231	snrnp48	96	42.899	ENSMLEG00000034004	SNRNP48	81	48.043	Mandrillus_leucophaeus
ENSAPEG00000003231	snrnp48	95	77.500	ENSMAMG00000018673	snrnp48	83	77.500	Mastacembelus_armatus
ENSAPEG00000003231	snrnp48	81	49.834	ENSMGAG00000006037	SNRNP48	79	55.319	Meleagris_gallopavo
ENSAPEG00000003231	snrnp48	96	44.348	ENSMAUG00000011944	Snrnp48	82	48.227	Mesocricetus_auratus
ENSAPEG00000003231	snrnp48	96	42.486	ENSMICG00000012497	SNRNP48	81	47.163	Microcebus_murinus
ENSAPEG00000003231	snrnp48	96	44.220	ENSMOCG00000015555	Snrnp48	82	48.057	Microtus_ochrogaster
ENSAPEG00000003231	snrnp48	56	85.789	ENSMMOG00000003072	-	60	85.789	Mola_mola
ENSAPEG00000003231	snrnp48	84	46.128	ENSMODG00000009996	SNRNP48	78	46.392	Monodelphis_domestica
ENSAPEG00000003231	snrnp48	95	78.261	ENSMALG00000005725	snrnp48	95	78.261	Monopterus_albus
ENSAPEG00000003231	snrnp48	96	43.768	MGP_CAROLIEiJ_G0018441	Snrnp48	82	47.518	Mus_caroli
ENSAPEG00000003231	snrnp48	96	43.768	ENSMUSG00000021431	Snrnp48	82	47.518	Mus_musculus
ENSAPEG00000003231	snrnp48	96	44.058	MGP_PahariEiJ_G0019509	Snrnp48	82	47.872	Mus_pahari
ENSAPEG00000003231	snrnp48	96	43.478	MGP_SPRETEiJ_G0019321	Snrnp48	82	47.163	Mus_spretus
ENSAPEG00000003231	snrnp48	96	44.798	ENSNGAG00000004849	Snrnp48	81	48.582	Nannospalax_galili
ENSAPEG00000003231	snrnp48	93	80.063	ENSNBRG00000012127	snrnp48	94	80.745	Neolamprologus_brichardi
ENSAPEG00000003231	snrnp48	96	42.899	ENSNLEG00000011667	SNRNP48	81	48.043	Nomascus_leucogenys
ENSAPEG00000003231	snrnp48	83	45.263	ENSOPRG00000015471	SNRNP48	86	45.196	Ochotona_princeps
ENSAPEG00000003231	snrnp48	93	81.013	ENSONIG00000001520	snrnp48	94	81.677	Oreochromis_niloticus
ENSAPEG00000003231	snrnp48	53	37.313	ENSOANG00000019888	-	96	38.308	Ornithorhynchus_anatinus
ENSAPEG00000003231	snrnp48	79	47.059	ENSOCUG00000005168	SNRNP48	90	47.331	Oryctolagus_cuniculus
ENSAPEG00000003231	snrnp48	88	79.461	ENSORLG00000015654	snrnp48	94	79.567	Oryzias_latipes
ENSAPEG00000003231	snrnp48	88	78.788	ENSORLG00020015976	snrnp48	80	78.947	Oryzias_latipes_hni
ENSAPEG00000003231	snrnp48	88	79.125	ENSORLG00015022379	snrnp48	81	79.257	Oryzias_latipes_hsok
ENSAPEG00000003231	snrnp48	93	80.063	ENSOMEG00000022007	snrnp48	94	79.814	Oryzias_melastigma
ENSAPEG00000003231	snrnp48	82	47.018	ENSOGAG00000005275	SNRNP48	82	47.312	Otolemur_garnettii
ENSAPEG00000003231	snrnp48	82	44.407	ENSOARG00000017319	SNRNP48	96	43.662	Ovis_aries
ENSAPEG00000003231	snrnp48	96	42.899	ENSPPAG00000032873	SNRNP48	81	48.043	Pan_paniscus
ENSAPEG00000003231	snrnp48	83	47.569	ENSPPRG00000004283	SNRNP48	81	47.872	Panthera_pardus
ENSAPEG00000003231	snrnp48	68	51.282	ENSPTIG00000013502	SNRNP48	77	51.754	Panthera_tigris_altaica
ENSAPEG00000003231	snrnp48	96	42.899	ENSPTRG00000017703	SNRNP48	81	48.043	Pan_troglodytes
ENSAPEG00000003231	snrnp48	96	42.899	ENSPANG00000000771	SNRNP48	81	48.043	Papio_anubis
ENSAPEG00000003231	snrnp48	83	59.930	ENSPKIG00000013703	snrnp48	60	60.498	Paramormyrops_kingsleyae
ENSAPEG00000003231	snrnp48	80	46.358	ENSPSIG00000002213	SNRNP48	74	50.633	Pelodiscus_sinensis
ENSAPEG00000003231	snrnp48	78	65.543	ENSPMGG00000008120	snrnp48	95	65.543	Periophthalmus_magnuspinnatus
ENSAPEG00000003231	snrnp48	96	44.638	ENSPEMG00000008872	Snrnp48	82	48.936	Peromyscus_maniculatus_bairdii
ENSAPEG00000003231	snrnp48	95	74.847	ENSPFOG00000003578	snrnp48	95	74.233	Poecilia_formosa
ENSAPEG00000003231	snrnp48	70	78.390	ENSPLAG00000002290	snrnp48	82	78.390	Poecilia_latipinna
ENSAPEG00000003231	snrnp48	95	74.847	ENSPMEG00000018033	snrnp48	95	74.233	Poecilia_mexicana
ENSAPEG00000003231	snrnp48	95	74.847	ENSPREG00000018541	snrnp48	95	74.540	Poecilia_reticulata
ENSAPEG00000003231	snrnp48	96	42.319	ENSPPYG00000016209	SNRNP48	81	47.331	Pongo_abelii
ENSAPEG00000003231	snrnp48	71	35.857	ENSPCAG00000011991	SNRNP48	93	37.200	Procavia_capensis
ENSAPEG00000003231	snrnp48	83	46.503	ENSPVAG00000002854	SNRNP48	81	46.786	Pteropus_vampyrus
ENSAPEG00000003231	snrnp48	92	80.386	ENSPNYG00000015399	snrnp48	91	82.270	Pundamilia_nyererei
ENSAPEG00000003231	snrnp48	96	43.840	ENSRNOG00000013756	Snrnp48	82	48.582	Rattus_norvegicus
ENSAPEG00000003231	snrnp48	83	47.735	ENSRBIG00000043856	SNRNP48	87	48.043	Rhinopithecus_bieti
ENSAPEG00000003231	snrnp48	96	42.899	ENSRROG00000043229	SNRNP48	81	48.043	Rhinopithecus_roxellana
ENSAPEG00000003231	snrnp48	96	43.188	ENSSBOG00000019486	SNRNP48	81	48.399	Saimiri_boliviensis_boliviensis
ENSAPEG00000003231	snrnp48	80	47.552	ENSSHAG00000014483	SNRNP48	80	47.857	Sarcophilus_harrisii
ENSAPEG00000003231	snrnp48	73	62.055	ENSSFOG00015006610	snrnp48	68	59.862	Scleropages_formosus
ENSAPEG00000003231	snrnp48	95	82.759	ENSSDUG00000014953	snrnp48	95	82.759	Seriola_dumerili
ENSAPEG00000003231	snrnp48	95	82.759	ENSSLDG00000005989	snrnp48	95	82.759	Seriola_lalandi_dorsalis
ENSAPEG00000003231	snrnp48	82	47.213	ENSSPUG00000006257	SNRNP48	61	53.636	Sphenodon_punctatus
ENSAPEG00000003231	snrnp48	95	91.277	ENSSPAG00000006454	snrnp48	95	91.277	Stegastes_partitus
ENSAPEG00000003231	snrnp48	82	48.867	ENSTGUG00000007575	SNRNP48	65	59.024	Taeniopygia_guttata
ENSAPEG00000003231	snrnp48	75	75.686	ENSTRUG00000007031	snrnp48	94	70.769	Takifugu_rubripes
ENSAPEG00000003231	snrnp48	99	65.970	ENSTNIG00000012977	-	92	67.500	Tetraodon_nigroviridis
ENSAPEG00000003231	snrnp48	77	47.191	ENSTBEG00000015620	SNRNP48	78	46.992	Tupaia_belangeri
ENSAPEG00000003231	snrnp48	91	43.544	ENSTTRG00000016715	SNRNP48	81	47.163	Tursiops_truncatus
ENSAPEG00000003231	snrnp48	96	44.477	ENSUAMG00000003690	SNRNP48	81	48.571	Ursus_americanus
ENSAPEG00000003231	snrnp48	68	50.427	ENSVPAG00000003557	SNRNP48	71	51.923	Vicugna_pacos
ENSAPEG00000003231	snrnp48	96	43.768	ENSVVUG00000004996	SNRNP48	81	47.331	Vulpes_vulpes
ENSAPEG00000003231	snrnp48	90	47.368	ENSXETG00000020447	snrnp48	79	48.689	Xenopus_tropicalis
ENSAPEG00000003231	snrnp48	95	66.049	ENSXCOG00000004478	snrnp48	95	66.667	Xiphophorus_couchianus
ENSAPEG00000003231	snrnp48	95	73.926	ENSXMAG00000013595	snrnp48	95	73.313	Xiphophorus_maculatus