EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000003252 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 15710 bases
Position: chr2:40120467-40136176
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000004577	MMR_HSR1	PF01926.23	7.1e-14	1	1
ENSAPEP00000004555	MMR_HSR1	PF01926.23	7.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000004701	-	1797	-	ENSAPEP00000004577	598 (aa)	-	-
ENSAPET00000004678	-	2412	-	ENSAPEP00000004555	621 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000003252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000003252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000003252	lsg1	66	30.070	ENSAPEG00000011154	gnl1	65	31.618
ENSAPEG00000003252	lsg1	51	33.014	ENSAPEG00000023280	gnl3l	56	33.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000003252	lsg1	99	64.091	ENSG00000041802	LSG1	98	75.287	Homo_sapiens
ENSAPEG00000003252	lsg1	100	95.974	ENSAPOG00000009694	lsg1	100	95.974	Acanthochromis_polyacanthus
ENSAPEG00000003252	lsg1	100	63.705	ENSAMEG00000009343	LSG1	100	63.499	Ailuropoda_melanoleuca
ENSAPEG00000003252	lsg1	99	80.899	ENSACIG00000012406	lsg1	100	80.975	Amphilophus_citrinellus
ENSAPEG00000003252	lsg1	100	98.873	ENSAOCG00000016066	lsg1	100	98.873	Amphiprion_ocellaris
ENSAPEG00000003252	lsg1	99	82.287	ENSATEG00000011794	lsg1	100	82.177	Anabas_testudineus
ENSAPEG00000003252	lsg1	95	62.063	ENSACAG00000004222	LSG1	100	61.905	Anolis_carolinensis
ENSAPEG00000003252	lsg1	99	64.697	ENSANAG00000021153	LSG1	99	64.697	Aotus_nancymaae
ENSAPEG00000003252	lsg1	100	80.982	ENSACLG00000000520	lsg1	100	80.183	Astatotilapia_calliptera
ENSAPEG00000003252	lsg1	100	73.313	ENSAMXG00000008271	lsg1	100	74.000	Astyanax_mexicanus
ENSAPEG00000003252	lsg1	99	64.985	ENSBTAG00000008461	LSG1	99	64.985	Bos_taurus
ENSAPEG00000003252	lsg1	76	44.156	WBGene00016907	C53H9.2	82	43.814	Caenorhabditis_elegans
ENSAPEG00000003252	lsg1	99	64.697	ENSCJAG00000013962	LSG1	99	64.697	Callithrix_jacchus
ENSAPEG00000003252	lsg1	95	66.190	ENSCAFG00000013445	LSG1	100	66.137	Canis_familiaris
ENSAPEG00000003252	lsg1	100	63.284	ENSCAFG00020002216	LSG1	99	65.760	Canis_lupus_dingo
ENSAPEG00000003252	lsg1	100	64.715	ENSCHIG00000015769	LSG1	100	64.715	Capra_hircus
ENSAPEG00000003252	lsg1	99	63.389	ENSTSYG00000001447	LSG1	99	63.238	Carlito_syrichta
ENSAPEG00000003252	lsg1	95	66.886	ENSCAPG00000009856	LSG1	99	66.776	Cavia_aperea
ENSAPEG00000003252	lsg1	99	63.636	ENSCCAG00000035744	LSG1	99	63.636	Cebus_capucinus
ENSAPEG00000003252	lsg1	99	64.848	ENSCATG00000042060	LSG1	99	63.485	Cercocebus_atys
ENSAPEG00000003252	lsg1	99	64.697	ENSCSAG00000008796	LSG1	92	64.697	Chlorocebus_sabaeus
ENSAPEG00000003252	lsg1	100	65.559	ENSCPBG00000015941	LSG1	83	65.559	Chrysemys_picta_bellii
ENSAPEG00000003252	lsg1	84	48.948	ENSCING00000007079	-	98	56.744	Ciona_intestinalis
ENSAPEG00000003252	lsg1	92	45.789	ENSCSAVG00000002514	-	98	52.852	Ciona_savignyi
ENSAPEG00000003252	lsg1	99	64.848	ENSCANG00000030709	LSG1	99	64.848	Colobus_angolensis_palliatus
ENSAPEG00000003252	lsg1	99	64.431	ENSCGRG00001019846	Lsg1	99	65.211	Cricetulus_griseus_chok1gshd
ENSAPEG00000003252	lsg1	99	64.363	ENSCGRG00000014617	Lsg1	99	64.977	Cricetulus_griseus_crigri
ENSAPEG00000003252	lsg1	99	78.130	ENSCSEG00000008522	lsg1	100	77.950	Cynoglossus_semilaevis
ENSAPEG00000003252	lsg1	98	79.902	ENSCVAG00000002484	lsg1	100	80.414	Cyprinodon_variegatus
ENSAPEG00000003252	lsg1	100	73.773	ENSDARG00000015352	lsg1	100	73.920	Danio_rerio
ENSAPEG00000003252	lsg1	99	63.733	ENSDNOG00000006224	LSG1	99	63.581	Dasypus_novemcinctus
ENSAPEG00000003252	lsg1	99	51.664	FBgn0266284	Ns3	99	51.185	Drosophila_melanogaster
ENSAPEG00000003252	lsg1	87	70.667	ENSETEG00000003888	LSG1	89	70.667	Echinops_telfairi
ENSAPEG00000003252	lsg1	88	56.446	ENSEBUG00000003119	lsg1	85	55.688	Eptatretus_burgeri
ENSAPEG00000003252	lsg1	99	63.528	ENSEASG00005000678	LSG1	99	63.994	Equus_asinus_asinus
ENSAPEG00000003252	lsg1	99	64.145	ENSECAG00000017659	LSG1	99	63.994	Equus_caballus
ENSAPEG00000003252	lsg1	86	55.833	ENSEEUG00000015217	LSG1	87	55.833	Erinaceus_europaeus
ENSAPEG00000003252	lsg1	100	72.814	ENSELUG00000023973	lsg1	100	73.635	Esox_lucius
ENSAPEG00000003252	lsg1	100	63.595	ENSFCAG00000024957	LSG1	100	64.048	Felis_catus
ENSAPEG00000003252	lsg1	93	63.047	ENSFALG00000007210	LSG1	94	62.237	Ficedula_albicollis
ENSAPEG00000003252	lsg1	99	64.969	ENSFDAG00000017373	LSG1	99	64.877	Fukomys_damarensis
ENSAPEG00000003252	lsg1	98	80.000	ENSFHEG00000003680	lsg1	100	78.947	Fundulus_heteroclitus
ENSAPEG00000003252	lsg1	99	71.885	ENSGMOG00000015834	lsg1	100	71.719	Gadus_morhua
ENSAPEG00000003252	lsg1	99	61.027	ENSGALG00000007058	LSG1	87	61.027	Gallus_gallus
ENSAPEG00000003252	lsg1	98	80.389	ENSGAFG00000015831	lsg1	100	80.411	Gambusia_affinis
ENSAPEG00000003252	lsg1	99	79.014	ENSGACG00000009323	lsg1	100	78.660	Gasterosteus_aculeatus
ENSAPEG00000003252	lsg1	99	63.939	ENSGGOG00000000520	LSG1	99	64.091	Gorilla_gorilla
ENSAPEG00000003252	lsg1	100	81.988	ENSHBUG00000005659	lsg1	100	81.173	Haplochromis_burtoni
ENSAPEG00000003252	lsg1	99	63.199	ENSHGLG00000017390	LSG1	99	63.665	Heterocephalus_glaber_female
ENSAPEG00000003252	lsg1	99	63.199	ENSHGLG00100018587	LSG1	99	63.665	Heterocephalus_glaber_male
ENSAPEG00000003252	lsg1	98	79.081	ENSHCOG00000016848	lsg1	100	78.825	Hippocampus_comes
ENSAPEG00000003252	lsg1	100	74.488	ENSIPUG00000008631	lsg1	100	74.488	Ictalurus_punctatus
ENSAPEG00000003252	lsg1	75	58.367	ENSSTOG00000010234	LSG1	92	58.964	Ictidomys_tridecemlineatus
ENSAPEG00000003252	lsg1	99	66.250	ENSJJAG00000015513	Lsg1	99	66.250	Jaculus_jaculus
ENSAPEG00000003252	lsg1	99	78.871	ENSKMAG00000009681	lsg1	100	78.515	Kryptolebias_marmoratus
ENSAPEG00000003252	lsg1	99	78.837	ENSLBEG00000024261	lsg1	100	79.545	Labrus_bergylta
ENSAPEG00000003252	lsg1	100	66.916	ENSLACG00000013399	LSG1	90	76.680	Latimeria_chalumnae
ENSAPEG00000003252	lsg1	99	69.457	ENSLOCG00000004918	lsg1	100	70.615	Lepisosteus_oculatus
ENSAPEG00000003252	lsg1	99	65.023	ENSLAFG00000012919	-	99	65.023	Loxodonta_africana
ENSAPEG00000003252	lsg1	99	64.697	ENSMFAG00000039903	LSG1	99	63.333	Macaca_fascicularis
ENSAPEG00000003252	lsg1	99	64.697	ENSMMUG00000010708	LSG1	99	64.697	Macaca_mulatta
ENSAPEG00000003252	lsg1	99	64.545	ENSMNEG00000031538	LSG1	99	63.333	Macaca_nemestrina
ENSAPEG00000003252	lsg1	99	64.394	ENSMLEG00000041184	LSG1	99	64.394	Mandrillus_leucophaeus
ENSAPEG00000003252	lsg1	100	78.515	ENSMAMG00000000470	lsg1	100	78.425	Mastacembelus_armatus
ENSAPEG00000003252	lsg1	100	82.143	ENSMZEG00005017865	lsg1	100	81.327	Maylandia_zebra
ENSAPEG00000003252	lsg1	89	61.953	ENSMGAG00000007050	LSG1	99	62.267	Meleagris_gallopavo
ENSAPEG00000003252	lsg1	91	64.471	ENSMAUG00000016976	Lsg1	91	65.165	Mesocricetus_auratus
ENSAPEG00000003252	lsg1	99	64.091	ENSMICG00000049087	LSG1	99	63.788	Microcebus_murinus
ENSAPEG00000003252	lsg1	99	63.957	ENSMOCG00000022136	Lsg1	99	64.571	Microtus_ochrogaster
ENSAPEG00000003252	lsg1	99	77.199	ENSMMOG00000008884	lsg1	100	77.541	Mola_mola
ENSAPEG00000003252	lsg1	99	56.502	ENSMODG00000019828	LSG1	99	56.394	Monodelphis_domestica
ENSAPEG00000003252	lsg1	100	66.102	MGP_CAROLIEiJ_G0020648	Lsg1	100	66.256	Mus_caroli
ENSAPEG00000003252	lsg1	100	65.688	ENSMUSG00000022538	Lsg1	100	65.842	Mus_musculus
ENSAPEG00000003252	lsg1	99	65.211	MGP_PahariEiJ_G0016352	Lsg1	100	65.237	Mus_pahari
ENSAPEG00000003252	lsg1	100	65.533	MGP_SPRETEiJ_G0021544	Lsg1	100	65.688	Mus_spretus
ENSAPEG00000003252	lsg1	100	63.487	ENSMPUG00000003734	LSG1	100	63.284	Mustela_putorius_furo
ENSAPEG00000003252	lsg1	100	63.705	ENSMLUG00000012548	LSG1	100	64.329	Myotis_lucifugus
ENSAPEG00000003252	lsg1	99	63.174	ENSNGAG00000021872	Lsg1	99	63.497	Nannospalax_galili
ENSAPEG00000003252	lsg1	99	64.848	ENSNLEG00000008293	LSG1	99	64.848	Nomascus_leucogenys
ENSAPEG00000003252	lsg1	71	72.043	ENSMEUG00000009041	-	82	72.165	Notamacropus_eugenii
ENSAPEG00000003252	lsg1	100	80.586	ENSONIG00000002635	lsg1	100	81.011	Oreochromis_niloticus
ENSAPEG00000003252	lsg1	95	67.044	ENSOANG00000012742	LSG1	99	67.044	Ornithorhynchus_anatinus
ENSAPEG00000003252	lsg1	99	63.843	ENSOCUG00000004817	LSG1	99	63.843	Oryctolagus_cuniculus
ENSAPEG00000003252	lsg1	99	79.773	ENSORLG00000007695	lsg1	100	79.741	Oryzias_latipes
ENSAPEG00000003252	lsg1	99	79.612	ENSORLG00020016286	lsg1	100	79.022	Oryzias_latipes_hni
ENSAPEG00000003252	lsg1	98	81.271	ENSORLG00015012025	lsg1	100	80.851	Oryzias_latipes_hsok
ENSAPEG00000003252	lsg1	99	77.419	ENSOMEG00000022379	lsg1	100	77.472	Oryzias_melastigma
ENSAPEG00000003252	lsg1	99	63.705	ENSOGAG00000003475	LSG1	99	63.253	Otolemur_garnettii
ENSAPEG00000003252	lsg1	100	64.787	ENSOARG00000020403	LSG1	100	64.787	Ovis_aries
ENSAPEG00000003252	lsg1	99	64.242	ENSPPAG00000029271	LSG1	99	64.091	Pan_paniscus
ENSAPEG00000003252	lsg1	100	62.930	ENSPPRG00000010281	LSG1	100	63.378	Panthera_pardus
ENSAPEG00000003252	lsg1	100	63.595	ENSPTIG00000010789	LSG1	100	64.048	Panthera_tigris_altaica
ENSAPEG00000003252	lsg1	99	64.091	ENSPTRG00000015760	LSG1	99	63.939	Pan_troglodytes
ENSAPEG00000003252	lsg1	99	64.394	ENSPANG00000018249	LSG1	99	63.030	Papio_anubis
ENSAPEG00000003252	lsg1	99	72.082	ENSPKIG00000002895	lsg1	99	72.713	Paramormyrops_kingsleyae
ENSAPEG00000003252	lsg1	95	61.490	ENSPSIG00000009821	LSG1	99	60.597	Pelodiscus_sinensis
ENSAPEG00000003252	lsg1	95	78.477	ENSPMGG00000000931	lsg1	100	77.944	Periophthalmus_magnuspinnatus
ENSAPEG00000003252	lsg1	99	63.511	ENSPEMG00000012082	-	99	63.664	Peromyscus_maniculatus_bairdii
ENSAPEG00000003252	lsg1	99	60.241	ENSPMAG00000007451	lsg1	99	59.104	Petromyzon_marinus
ENSAPEG00000003252	lsg1	99	65.285	ENSPCIG00000013890	LSG1	82	65.285	Phascolarctos_cinereus
ENSAPEG00000003252	lsg1	98	80.578	ENSPFOG00000021882	lsg1	100	79.812	Poecilia_formosa
ENSAPEG00000003252	lsg1	98	79.615	ENSPLAG00000019536	lsg1	100	78.873	Poecilia_latipinna
ENSAPEG00000003252	lsg1	98	79.520	ENSPMEG00000017281	lsg1	100	78.783	Poecilia_mexicana
ENSAPEG00000003252	lsg1	98	67.874	ENSPREG00000006048	lsg1	100	67.692	Poecilia_reticulata
ENSAPEG00000003252	lsg1	92	64.145	ENSPPYG00000014425	LSG1	100	64.145	Pongo_abelii
ENSAPEG00000003252	lsg1	89	70.667	ENSPCAG00000005511	LSG1	75	70.667	Procavia_capensis
ENSAPEG00000003252	lsg1	99	63.238	ENSPCOG00000012360	LSG1	99	63.238	Propithecus_coquereli
ENSAPEG00000003252	lsg1	100	80.982	ENSPNYG00000021994	lsg1	100	80.183	Pundamilia_nyererei
ENSAPEG00000003252	lsg1	100	75.466	ENSPNAG00000015533	lsg1	100	75.000	Pygocentrus_nattereri
ENSAPEG00000003252	lsg1	100	63.308	ENSRNOG00000001727	Lsg1	100	63.189	Rattus_norvegicus
ENSAPEG00000003252	lsg1	99	64.036	ENSRBIG00000029053	LSG1	99	64.036	Rhinopithecus_bieti
ENSAPEG00000003252	lsg1	99	64.036	ENSRROG00000037702	LSG1	99	64.036	Rhinopithecus_roxellana
ENSAPEG00000003252	lsg1	83	42.176	YGL099W	LSG1	76	41.098	Saccharomyces_cerevisiae
ENSAPEG00000003252	lsg1	99	64.848	ENSSBOG00000034938	LSG1	99	64.848	Saimiri_boliviensis_boliviensis
ENSAPEG00000003252	lsg1	77	62.595	ENSSHAG00000003487	LSG1	87	75.229	Sarcophilus_harrisii
ENSAPEG00000003252	lsg1	99	74.522	ENSSFOG00015008955	lsg1	100	73.676	Scleropages_formosus
ENSAPEG00000003252	lsg1	99	83.596	ENSSDUG00000004622	lsg1	100	82.043	Seriola_dumerili
ENSAPEG00000003252	lsg1	99	82.931	ENSSLDG00000010869	lsg1	100	81.546	Seriola_lalandi_dorsalis
ENSAPEG00000003252	lsg1	87	65.179	ENSSARG00000012981	LSG1	76	70.455	Sorex_araneus
ENSAPEG00000003252	lsg1	100	65.706	ENSSPUG00000016347	LSG1	100	65.455	Sphenodon_punctatus
ENSAPEG00000003252	lsg1	100	87.200	ENSSPAG00000005508	lsg1	100	88.160	Stegastes_partitus
ENSAPEG00000003252	lsg1	100	64.198	ENSSSCG00000011827	LSG1	100	64.198	Sus_scrofa
ENSAPEG00000003252	lsg1	89	60.891	ENSTGUG00000009068	LSG1	100	60.862	Taeniopygia_guttata
ENSAPEG00000003252	lsg1	98	74.959	ENSTRUG00000017380	lsg1	100	74.326	Takifugu_rubripes
ENSAPEG00000003252	lsg1	98	79.487	ENSTNIG00000015570	lsg1	100	80.000	Tetraodon_nigroviridis
ENSAPEG00000003252	lsg1	90	66.355	ENSTTRG00000000559	LSG1	91	66.355	Tursiops_truncatus
ENSAPEG00000003252	lsg1	100	63.952	ENSUAMG00000012454	LSG1	100	63.897	Ursus_americanus
ENSAPEG00000003252	lsg1	100	63.952	ENSUMAG00000000855	LSG1	100	63.897	Ursus_maritimus
ENSAPEG00000003252	lsg1	95	61.624	ENSVPAG00000012400	LSG1	100	60.191	Vicugna_pacos
ENSAPEG00000003252	lsg1	97	63.158	ENSVVUG00000008956	LSG1	99	64.476	Vulpes_vulpes
ENSAPEG00000003252	lsg1	100	67.180	ENSXETG00000003451	lsg1	100	67.087	Xenopus_tropicalis
ENSAPEG00000003252	lsg1	98	79.839	ENSXCOG00000003239	lsg1	100	78.416	Xiphophorus_couchianus
ENSAPEG00000003252	lsg1	98	77.934	ENSXMAG00000005536	lsg1	100	77.190	Xiphophorus_maculatus