EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000003646 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 13965 bases
Position: chr15:18345808-18359772
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000005170	ARS2	PF04959.13	3.3e-90	1	1
ENSAPEP00000005144	ARS2	PF04959.13	7.9e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000005281	-	7609	-	ENSAPEP00000005144	880 (aa)	-	-
ENSAPET00000005309	-	2388	-	ENSAPEP00000005170	795 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000003646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000003646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000003646	srrt	93	56.615	ENSAPEG00000020016	-	77	66.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000003646	srrt	85	75.974	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSAPEG00000003646	srrt	100	98.639	ENSAPOG00000002304	srrt	100	98.639	Acanthochromis_polyacanthus
ENSAPEG00000003646	srrt	85	76.923	ENSAMEG00000014506	SRRT	81	76.923	Ailuropoda_melanoleuca
ENSAPEG00000003646	srrt	95	90.755	ENSACIG00000015795	srrt	95	91.276	Amphilophus_citrinellus
ENSAPEG00000003646	srrt	100	99.205	ENSAOCG00000009693	srrt	100	99.205	Amphiprion_ocellaris
ENSAPEG00000003646	srrt	93	56.615	ENSAOCG00000009189	-	77	66.812	Amphiprion_ocellaris
ENSAPEG00000003646	srrt	59	64.389	ENSATEG00000003652	-	85	65.302	Anabas_testudineus
ENSAPEG00000003646	srrt	95	90.465	ENSATEG00000014425	srrt	95	89.035	Anabas_testudineus
ENSAPEG00000003646	srrt	91	75.378	ENSACAG00000001014	SRRT	84	75.870	Anolis_carolinensis
ENSAPEG00000003646	srrt	85	75.699	ENSANAG00000031718	SRRT	79	75.699	Aotus_nancymaae
ENSAPEG00000003646	srrt	95	92.014	ENSACLG00000013156	srrt	92	91.061	Astatotilapia_calliptera
ENSAPEG00000003646	srrt	82	65.106	ENSACLG00000009423	-	76	65.801	Astatotilapia_calliptera
ENSAPEG00000003646	srrt	89	81.069	ENSAMXG00000016671	srrt	81	82.080	Astyanax_mexicanus
ENSAPEG00000003646	srrt	85	75.269	ENSBTAG00000001134	SRRT	84	75.269	Bos_taurus
ENSAPEG00000003646	srrt	71	41.513	WBGene00017085	E01A2.2	85	42.159	Caenorhabditis_elegans
ENSAPEG00000003646	srrt	85	75.484	ENSCJAG00000014917	SRRT	79	75.484	Callithrix_jacchus
ENSAPEG00000003646	srrt	96	65.046	ENSCAFG00000023538	SRRT	84	75.484	Canis_familiaris
ENSAPEG00000003646	srrt	96	65.157	ENSCAFG00020013358	SRRT	85	74.492	Canis_lupus_dingo
ENSAPEG00000003646	srrt	87	75.758	ENSCHIG00000010495	SRRT	85	75.758	Capra_hircus
ENSAPEG00000003646	srrt	84	75.974	ENSTSYG00000036426	SRRT	82	75.974	Carlito_syrichta
ENSAPEG00000003646	srrt	87	76.484	ENSCAPG00000013586	SRRT	88	76.484	Cavia_aperea
ENSAPEG00000003646	srrt	88	75.107	ENSCPOG00000001739	SRRT	84	75.107	Cavia_porcellus
ENSAPEG00000003646	srrt	85	75.699	ENSCCAG00000015877	SRRT	79	75.699	Cebus_capucinus
ENSAPEG00000003646	srrt	91	75.758	ENSCATG00000036306	SRRT	84	75.484	Cercocebus_atys
ENSAPEG00000003646	srrt	95	65.815	ENSCLAG00000007568	SRRT	89	71.949	Chinchilla_lanigera
ENSAPEG00000003646	srrt	85	75.699	ENSCSAG00000017996	SRRT	79	75.699	Chlorocebus_sabaeus
ENSAPEG00000003646	srrt	59	70.740	ENSCHOG00000007815	SRRT	67	70.740	Choloepus_hoffmanni
ENSAPEG00000003646	srrt	95	53.530	ENSCPBG00000011553	SRRT	84	64.855	Chrysemys_picta_bellii
ENSAPEG00000003646	srrt	95	48.008	ENSCING00000003506	-	75	51.037	Ciona_intestinalis
ENSAPEG00000003646	srrt	100	42.249	ENSCSAVG00000008394	-	89	55.429	Ciona_savignyi
ENSAPEG00000003646	srrt	85	75.974	ENSCANG00000034556	SRRT	79	75.974	Colobus_angolensis_palliatus
ENSAPEG00000003646	srrt	85	75.914	ENSCGRG00001001594	Srrt	79	75.914	Cricetulus_griseus_chok1gshd
ENSAPEG00000003646	srrt	75	75.375	ENSCGRG00000007292	Srrt	89	72.377	Cricetulus_griseus_crigri
ENSAPEG00000003646	srrt	97	80.828	ENSCSEG00000017878	srrt	95	79.221	Cynoglossus_semilaevis
ENSAPEG00000003646	srrt	80	62.971	ENSCSEG00000005233	-	78	65.302	Cynoglossus_semilaevis
ENSAPEG00000003646	srrt	89	55.527	ENSCVAG00000017344	-	94	56.477	Cyprinodon_variegatus
ENSAPEG00000003646	srrt	95	92.178	ENSCVAG00000019848	srrt	95	89.881	Cyprinodon_variegatus
ENSAPEG00000003646	srrt	91	85.371	ENSDARG00000017762	srrt	95	77.791	Danio_rerio
ENSAPEG00000003646	srrt	85	75.699	ENSDNOG00000003851	SRRT	79	75.699	Dasypus_novemcinctus
ENSAPEG00000003646	srrt	85	75.922	ENSDORG00000005584	Srrt	89	72.570	Dipodomys_ordii
ENSAPEG00000003646	srrt	99	47.359	FBgn0033062	Ars2	68	53.092	Drosophila_melanogaster
ENSAPEG00000003646	srrt	80	72.939	ENSETEG00000016175	SRRT	71	72.939	Echinops_telfairi
ENSAPEG00000003646	srrt	77	56.891	ENSEBUG00000008517	-	88	56.109	Eptatretus_burgeri
ENSAPEG00000003646	srrt	96	65.081	ENSEASG00005016956	SRRT	84	75.699	Equus_asinus_asinus
ENSAPEG00000003646	srrt	96	65.081	ENSECAG00000012292	SRRT	84	75.699	Equus_caballus
ENSAPEG00000003646	srrt	81	76.042	ENSEEUG00000009117	SRRT	70	81.081	Erinaceus_europaeus
ENSAPEG00000003646	srrt	91	84.165	ENSELUG00000006651	srrt	81	84.599	Esox_lucius
ENSAPEG00000003646	srrt	93	58.872	ENSELUG00000021216	-	78	68.230	Esox_lucius
ENSAPEG00000003646	srrt	85	75.699	ENSFCAG00000006855	SRRT	84	75.699	Felis_catus
ENSAPEG00000003646	srrt	85	71.983	ENSFDAG00000021347	SRRT	88	69.095	Fukomys_damarensis
ENSAPEG00000003646	srrt	59	56.879	ENSFHEG00000004105	-	93	56.780	Fundulus_heteroclitus
ENSAPEG00000003646	srrt	95	78.590	ENSFHEG00000002756	srrt	90	93.254	Fundulus_heteroclitus
ENSAPEG00000003646	srrt	96	76.185	ENSGMOG00000018619	srrt	81	81.400	Gadus_morhua
ENSAPEG00000003646	srrt	65	66.434	ENSGMOG00000018694	-	77	65.324	Gadus_morhua
ENSAPEG00000003646	srrt	92	55.128	ENSGAFG00000020383	-	94	57.305	Gambusia_affinis
ENSAPEG00000003646	srrt	95	88.439	ENSGAFG00000005423	srrt	95	89.035	Gambusia_affinis
ENSAPEG00000003646	srrt	96	88.915	ENSGACG00000020387	srrt	83	90.870	Gasterosteus_aculeatus
ENSAPEG00000003646	srrt	93	55.621	ENSGACG00000001100	-	79	63.326	Gasterosteus_aculeatus
ENSAPEG00000003646	srrt	85	75.699	ENSGGOG00000001508	SRRT	79	75.974	Gorilla_gorilla
ENSAPEG00000003646	srrt	95	92.372	ENSHBUG00000002942	srrt	92	91.418	Haplochromis_burtoni
ENSAPEG00000003646	srrt	85	74.946	ENSHGLG00000008344	Srrt	89	71.734	Heterocephalus_glaber_female
ENSAPEG00000003646	srrt	96	65.006	ENSHGLG00100018857	Srrt	89	72.511	Heterocephalus_glaber_male
ENSAPEG00000003646	srrt	92	55.968	ENSHCOG00000008904	-	89	62.832	Hippocampus_comes
ENSAPEG00000003646	srrt	96	87.029	ENSHCOG00000005403	srrt	95	83.552	Hippocampus_comes
ENSAPEG00000003646	srrt	88	81.917	ENSIPUG00000021150	srrt	95	74.383	Ictalurus_punctatus
ENSAPEG00000003646	srrt	85	75.974	ENSSTOG00000013776	SRRT	83	75.974	Ictidomys_tridecemlineatus
ENSAPEG00000003646	srrt	85	76.923	ENSJJAG00000010446	Srrt	89	73.160	Jaculus_jaculus
ENSAPEG00000003646	srrt	82	63.278	ENSKMAG00000008468	-	78	64.346	Kryptolebias_marmoratus
ENSAPEG00000003646	srrt	92	90.832	ENSKMAG00000013599	srrt	95	88.019	Kryptolebias_marmoratus
ENSAPEG00000003646	srrt	56	65.493	ENSLBEG00000028983	-	72	67.719	Labrus_bergylta
ENSAPEG00000003646	srrt	97	85.577	ENSLBEG00000016308	srrt	95	85.450	Labrus_bergylta
ENSAPEG00000003646	srrt	95	55.461	ENSLACG00000001089	SRRT	95	55.280	Latimeria_chalumnae
ENSAPEG00000003646	srrt	81	84.810	ENSLOCG00000013658	srrt	78	86.275	Lepisosteus_oculatus
ENSAPEG00000003646	srrt	85	75.914	ENSLAFG00000007725	SRRT	84	75.914	Loxodonta_africana
ENSAPEG00000003646	srrt	85	75.974	ENSMFAG00000033745	SRRT	83	74.207	Macaca_fascicularis
ENSAPEG00000003646	srrt	85	75.699	ENSMMUG00000021255	SRRT	79	75.699	Macaca_mulatta
ENSAPEG00000003646	srrt	85	75.699	ENSMNEG00000041864	SRRT	81	74.207	Macaca_nemestrina
ENSAPEG00000003646	srrt	85	75.974	ENSMLEG00000029479	SRRT	81	74.207	Mandrillus_leucophaeus
ENSAPEG00000003646	srrt	85	65.957	ENSMAMG00000010681	-	79	66.304	Mastacembelus_armatus
ENSAPEG00000003646	srrt	95	90.584	ENSMAMG00000014311	srrt	95	90.346	Mastacembelus_armatus
ENSAPEG00000003646	srrt	95	92.133	ENSMZEG00005016135	srrt	92	91.180	Maylandia_zebra
ENSAPEG00000003646	srrt	82	65.319	ENSMZEG00005028002	-	76	66.017	Maylandia_zebra
ENSAPEG00000003646	srrt	85	75.269	ENSMAUG00000011386	Srrt	89	71.915	Mesocricetus_auratus
ENSAPEG00000003646	srrt	91	75.484	ENSMICG00000009471	SRRT	81	73.996	Microcebus_murinus
ENSAPEG00000003646	srrt	85	75.699	ENSMOCG00000001971	Srrt	89	72.903	Microtus_ochrogaster
ENSAPEG00000003646	srrt	95	85.088	ENSMMOG00000016399	srrt	88	94.565	Mola_mola
ENSAPEG00000003646	srrt	78	65.817	ENSMMOG00000011137	-	85	66.377	Mola_mola
ENSAPEG00000003646	srrt	57	71.795	ENSMODG00000004862	SRRT	89	72.436	Monodelphis_domestica
ENSAPEG00000003646	srrt	89	87.368	ENSMALG00000018604	srrt	86	88.403	Monopterus_albus
ENSAPEG00000003646	srrt	69	48.468	ENSMALG00000005567	-	100	47.387	Monopterus_albus
ENSAPEG00000003646	srrt	85	76.923	MGP_CAROLIEiJ_G0027870	Srrt	99	74.254	Mus_caroli
ENSAPEG00000003646	srrt	85	76.923	ENSMUSG00000037364	Srrt	99	74.254	Mus_musculus
ENSAPEG00000003646	srrt	85	76.923	MGP_PahariEiJ_G0024456	Srrt	99	74.254	Mus_pahari
ENSAPEG00000003646	srrt	85	76.923	MGP_SPRETEiJ_G0028875	Srrt	99	74.254	Mus_spretus
ENSAPEG00000003646	srrt	96	64.931	ENSMPUG00000015839	SRRT	84	75.699	Mustela_putorius_furo
ENSAPEG00000003646	srrt	91	75.484	ENSMLUG00000009975	SRRT	79	75.484	Myotis_lucifugus
ENSAPEG00000003646	srrt	96	65.046	ENSNGAG00000023715	Srrt	81	76.860	Nannospalax_galili
ENSAPEG00000003646	srrt	98	89.907	ENSNBRG00000019100	srrt	95	89.392	Neolamprologus_brichardi
ENSAPEG00000003646	srrt	83	70.982	ENSNLEG00000011987	SRRT	90	65.435	Nomascus_leucogenys
ENSAPEG00000003646	srrt	96	54.566	ENSMEUG00000011941	SRRT	77	62.500	Notamacropus_eugenii
ENSAPEG00000003646	srrt	66	70.455	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSAPEG00000003646	srrt	58	72.464	ENSODEG00000016856	SRRT	89	72.727	Octodon_degus
ENSAPEG00000003646	srrt	93	56.619	ENSONIG00000016080	-	78	66.237	Oreochromis_niloticus
ENSAPEG00000003646	srrt	95	92.143	ENSONIG00000004242	srrt	95	88.979	Oreochromis_niloticus
ENSAPEG00000003646	srrt	97	92.389	ENSORLG00000008120	srrt	83	92.341	Oryzias_latipes
ENSAPEG00000003646	srrt	97	92.128	ENSORLG00020003058	srrt	83	92.123	Oryzias_latipes_hni
ENSAPEG00000003646	srrt	97	92.178	ENSORLG00015008062	srrt	83	92.123	Oryzias_latipes_hsok
ENSAPEG00000003646	srrt	93	58.232	ENSOMEG00000006963	-	79	67.281	Oryzias_melastigma
ENSAPEG00000003646	srrt	97	92.050	ENSOMEG00000003155	srrt	90	92.123	Oryzias_melastigma
ENSAPEG00000003646	srrt	85	75.699	ENSOGAG00000017242	SRRT	84	75.699	Otolemur_garnettii
ENSAPEG00000003646	srrt	85	75.541	ENSOARG00000015645	SRRT	83	75.541	Ovis_aries
ENSAPEG00000003646	srrt	85	75.974	ENSPPAG00000041090	SRRT	79	75.974	Pan_paniscus
ENSAPEG00000003646	srrt	85	75.974	ENSPPRG00000009557	SRRT	83	75.541	Panthera_pardus
ENSAPEG00000003646	srrt	85	75.699	ENSPTIG00000014355	SRRT	84	75.699	Panthera_tigris_altaica
ENSAPEG00000003646	srrt	85	75.974	ENSPTRG00000019511	SRRT	79	75.974	Pan_troglodytes
ENSAPEG00000003646	srrt	84	74.207	ENSPANG00000020763	SRRT	80	74.207	Papio_anubis
ENSAPEG00000003646	srrt	89	80.879	ENSPKIG00000022212	-	85	81.319	Paramormyrops_kingsleyae
ENSAPEG00000003646	srrt	94	80.380	ENSPKIG00000005434	srrt	95	72.660	Paramormyrops_kingsleyae
ENSAPEG00000003646	srrt	89	75.877	ENSPSIG00000016311	SRRT	84	75.877	Pelodiscus_sinensis
ENSAPEG00000003646	srrt	97	82.010	ENSPMGG00000002841	srrt	89	89.462	Periophthalmus_magnuspinnatus
ENSAPEG00000003646	srrt	85	76.923	ENSPEMG00000010834	Srrt	89	72.727	Peromyscus_maniculatus_bairdii
ENSAPEG00000003646	srrt	96	54.650	ENSPMAG00000009614	-	81	63.502	Petromyzon_marinus
ENSAPEG00000003646	srrt	91	73.448	ENSPCIG00000000816	SRRT	83	73.876	Phascolarctos_cinereus
ENSAPEG00000003646	srrt	95	88.929	ENSPFOG00000005704	srrt	95	89.643	Poecilia_formosa
ENSAPEG00000003646	srrt	92	55.799	ENSPFOG00000016554	-	94	57.179	Poecilia_formosa
ENSAPEG00000003646	srrt	92	55.412	ENSPLAG00000004526	-	94	57.398	Poecilia_latipinna
ENSAPEG00000003646	srrt	92	91.102	ENSPLAG00000021992	srrt	95	87.028	Poecilia_latipinna
ENSAPEG00000003646	srrt	95	88.690	ENSPMEG00000001182	srrt	95	89.405	Poecilia_mexicana
ENSAPEG00000003646	srrt	87	55.374	ENSPMEG00000001520	-	94	56.283	Poecilia_mexicana
ENSAPEG00000003646	srrt	95	88.571	ENSPREG00000022308	srrt	95	89.286	Poecilia_reticulata
ENSAPEG00000003646	srrt	85	72.414	ENSPPYG00000017432	SRRT	77	71.930	Pongo_abelii
ENSAPEG00000003646	srrt	88	73.784	ENSPCAG00000001621	SRRT	79	73.784	Procavia_capensis
ENSAPEG00000003646	srrt	91	75.699	ENSPCOG00000025751	SRRT	84	75.699	Propithecus_coquereli
ENSAPEG00000003646	srrt	66	67.742	ENSPVAG00000000834	SRRT	88	67.742	Pteropus_vampyrus
ENSAPEG00000003646	srrt	95	92.491	ENSPNYG00000018710	srrt	95	91.538	Pundamilia_nyererei
ENSAPEG00000003646	srrt	90	88.608	ENSPNAG00000010629	srrt	69	88.462	Pygocentrus_nattereri
ENSAPEG00000003646	srrt	57	66.376	ENSRNOG00000048277	AABR07035787.1	92	66.376	Rattus_norvegicus
ENSAPEG00000003646	srrt	85	75.699	ENSRBIG00000035718	SRRT	81	74.207	Rhinopithecus_bieti
ENSAPEG00000003646	srrt	85	75.699	ENSRROG00000030622	SRRT	81	74.207	Rhinopithecus_roxellana
ENSAPEG00000003646	srrt	85	75.699	ENSSBOG00000033570	SRRT	80	75.974	Saimiri_boliviensis_boliviensis
ENSAPEG00000003646	srrt	72	63.761	ENSSHAG00000007349	-	74	73.774	Sarcophilus_harrisii
ENSAPEG00000003646	srrt	93	85.683	ENSSFOG00015017293	srrt	95	77.400	Scleropages_formosus
ENSAPEG00000003646	srrt	95	90.584	ENSSMAG00000015342	srrt	93	94.967	Scophthalmus_maximus
ENSAPEG00000003646	srrt	57	64.871	ENSSMAG00000018195	-	94	55.485	Scophthalmus_maximus
ENSAPEG00000003646	srrt	100	95.795	ENSSDUG00000012049	srrt	95	95.795	Seriola_dumerili
ENSAPEG00000003646	srrt	58	54.979	ENSSDUG00000002051	-	93	55.579	Seriola_dumerili
ENSAPEG00000003646	srrt	95	87.000	ENSSLDG00000017477	srrt	95	87.875	Seriola_lalandi_dorsalis
ENSAPEG00000003646	srrt	84	65.111	ENSSPAG00000018943	-	93	57.205	Stegastes_partitus
ENSAPEG00000003646	srrt	100	96.942	ENSSPAG00000005665	srrt	98	96.942	Stegastes_partitus
ENSAPEG00000003646	srrt	81	74.718	ENSSSCG00000024789	SRRT	86	74.718	Sus_scrofa
ENSAPEG00000003646	srrt	98	85.484	ENSTRUG00000016075	srrt	83	90.538	Takifugu_rubripes
ENSAPEG00000003646	srrt	90	54.161	ENSTRUG00000000023	-	79	61.098	Takifugu_rubripes
ENSAPEG00000003646	srrt	70	87.872	ENSTNIG00000011779	srrt	87	89.384	Tetraodon_nigroviridis
ENSAPEG00000003646	srrt	88	63.617	ENSTNIG00000003111	-	81	64.069	Tetraodon_nigroviridis
ENSAPEG00000003646	srrt	63	77.966	ENSTBEG00000005212	SRRT	57	77.966	Tupaia_belangeri
ENSAPEG00000003646	srrt	89	75.484	ENSTTRG00000011104	SRRT	79	75.484	Tursiops_truncatus
ENSAPEG00000003646	srrt	84	75.699	ENSUAMG00000027997	SRRT	86	75.699	Ursus_americanus
ENSAPEG00000003646	srrt	85	75.699	ENSUMAG00000011295	SRRT	84	75.699	Ursus_maritimus
ENSAPEG00000003646	srrt	96	65.046	ENSVVUG00000023572	SRRT	84	75.484	Vulpes_vulpes
ENSAPEG00000003646	srrt	78	73.596	ENSXETG00000025124	srrt	95	56.988	Xenopus_tropicalis
ENSAPEG00000003646	srrt	57	53.057	ENSXCOG00000013105	-	91	53.813	Xiphophorus_couchianus
ENSAPEG00000003646	srrt	98	88.953	ENSXMAG00000007627	srrt	95	88.677	Xiphophorus_maculatus
ENSAPEG00000003646	srrt	92	55.527	ENSXMAG00000002090	-	94	57.269	Xiphophorus_maculatus