EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000003889 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 14643 bases
Position: chr5:29548955-29563597
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000005416	ResIII	PF04851.15	3.5e-06	1	1
ENSAPEP00000005446	ResIII	PF04851.15	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000005588	-	4044	-	ENSAPEP00000005446	1082 (aa)	-	-
ENSAPET00000005558	-	3717	-	ENSAPEP00000005416	1064 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000003889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000003889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000003889	smarcad1a	66	62.483	ENSG00000163104	SMARCAD1	99	67.508	Homo_sapiens
ENSAPEG00000003889	smarcad1a	100	94.361	ENSAPOG00000011446	smarcad1a	100	94.361	Acanthochromis_polyacanthus
ENSAPEG00000003889	smarcad1a	96	62.535	ENSAMEG00000005844	SMARCAD1	100	63.068	Ailuropoda_melanoleuca
ENSAPEG00000003889	smarcad1a	62	96.000	ENSACIG00000018326	smarcad1a	100	96.000	Amphilophus_citrinellus
ENSAPEG00000003889	smarcad1a	100	99.060	ENSAOCG00000019762	smarcad1a	100	99.060	Amphiprion_ocellaris
ENSAPEG00000003889	smarcad1a	95	84.190	ENSATEG00000015608	smarcad1a	99	84.387	Anabas_testudineus
ENSAPEG00000003889	smarcad1a	85	65.762	ENSAPLG00000004630	SMARCAD1	99	63.380	Anas_platyrhynchos
ENSAPEG00000003889	smarcad1a	63	63.811	ENSACAG00000013554	SMARCAD1	67	63.043	Anolis_carolinensis
ENSAPEG00000003889	smarcad1a	87	62.748	ENSANAG00000020488	SMARCAD1	97	62.748	Aotus_nancymaae
ENSAPEG00000003889	smarcad1a	100	80.225	ENSACLG00000017063	smarcad1a	100	80.188	Astatotilapia_calliptera
ENSAPEG00000003889	smarcad1a	63	73.802	ENSAMXG00000015470	smarcad1a	93	73.802	Astyanax_mexicanus
ENSAPEG00000003889	smarcad1a	72	72.635	ENSAMXG00000019130	smarcad1b	84	72.635	Astyanax_mexicanus
ENSAPEG00000003889	smarcad1a	96	62.170	ENSBTAG00000017061	SMARCAD1	100	62.606	Bos_taurus
ENSAPEG00000003889	smarcad1a	62	40.658	WBGene00010845	M03C11.8	72	38.950	Caenorhabditis_elegans
ENSAPEG00000003889	smarcad1a	96	62.890	ENSCJAG00000006778	SMARCAD1	100	62.890	Callithrix_jacchus
ENSAPEG00000003889	smarcad1a	96	62.674	ENSCAFG00000010026	SMARCAD1	100	63.210	Canis_familiaris
ENSAPEG00000003889	smarcad1a	88	62.674	ENSCAFG00020003994	SMARCAD1	100	63.210	Canis_lupus_dingo
ENSAPEG00000003889	smarcad1a	96	62.890	ENSCHIG00000012905	SMARCAD1	100	62.890	Capra_hircus
ENSAPEG00000003889	smarcad1a	98	61.696	ENSTSYG00000002706	SMARCAD1	100	63.558	Carlito_syrichta
ENSAPEG00000003889	smarcad1a	84	53.964	ENSCAPG00000016744	SMARCAD1	89	57.016	Cavia_aperea
ENSAPEG00000003889	smarcad1a	96	61.752	ENSCPOG00000011398	SMARCAD1	100	62.804	Cavia_porcellus
ENSAPEG00000003889	smarcad1a	96	63.031	ENSCCAG00000022264	SMARCAD1	99	67.677	Cebus_capucinus
ENSAPEG00000003889	smarcad1a	96	57.902	ENSCATG00000035663	SMARCAD1	99	62.890	Cercocebus_atys
ENSAPEG00000003889	smarcad1a	84	62.483	ENSCSAG00000004186	SMARCAD1	100	62.890	Chlorocebus_sabaeus
ENSAPEG00000003889	smarcad1a	90	65.327	ENSCPBG00000013203	SMARCAD1	97	65.584	Chrysemys_picta_bellii
ENSAPEG00000003889	smarcad1a	61	50.606	ENSCING00000001688	-	98	50.606	Ciona_intestinalis
ENSAPEG00000003889	smarcad1a	55	67.508	ENSCANG00000003556	SMARCAD1	99	67.508	Colobus_angolensis_palliatus
ENSAPEG00000003889	smarcad1a	96	61.441	ENSCGRG00001015056	Smarcad1	100	61.441	Cricetulus_griseus_chok1gshd
ENSAPEG00000003889	smarcad1a	96	61.441	ENSCGRG00000014087	Smarcad1	100	61.441	Cricetulus_griseus_crigri
ENSAPEG00000003889	smarcad1a	100	72.736	ENSCSEG00000014419	-	99	74.016	Cynoglossus_semilaevis
ENSAPEG00000003889	smarcad1a	100	72.217	ENSCSEG00000017903	smarcad1a	100	72.585	Cynoglossus_semilaevis
ENSAPEG00000003889	smarcad1a	70	76.190	ENSDARG00000073721	smarcad1b	83	73.745	Danio_rerio
ENSAPEG00000003889	smarcad1a	93	69.335	ENSDARG00000014041	smarcad1a	100	58.131	Danio_rerio
ENSAPEG00000003889	smarcad1a	96	63.068	ENSDNOG00000000806	-	100	63.068	Dasypus_novemcinctus
ENSAPEG00000003889	smarcad1a	96	61.506	ENSDORG00000012331	Smarcad1	100	62.358	Dipodomys_ordii
ENSAPEG00000003889	smarcad1a	60	44.733	FBgn0032157	Etl1	81	43.571	Drosophila_melanogaster
ENSAPEG00000003889	smarcad1a	60	48.244	ENSEBUG00000003969	smarcad1a	98	48.025	Eptatretus_burgeri
ENSAPEG00000003889	smarcad1a	96	62.622	ENSEASG00005012382	SMARCAD1	100	63.068	Equus_asinus_asinus
ENSAPEG00000003889	smarcad1a	96	62.622	ENSECAG00000011562	SMARCAD1	100	63.068	Equus_caballus
ENSAPEG00000003889	smarcad1a	100	68.911	ENSELUG00000018535	smarcad1a	100	68.148	Esox_lucius
ENSAPEG00000003889	smarcad1a	72	71.366	ENSELUG00000019154	smarcad1b	83	71.366	Esox_lucius
ENSAPEG00000003889	smarcad1a	96	63.210	ENSFCAG00000003958	SMARCAD1	99	67.845	Felis_catus
ENSAPEG00000003889	smarcad1a	93	66.018	ENSFALG00000006089	SMARCAD1	100	66.018	Ficedula_albicollis
ENSAPEG00000003889	smarcad1a	100	71.546	ENSFHEG00000012778	smarcad1a	100	72.187	Fundulus_heteroclitus
ENSAPEG00000003889	smarcad1a	82	82.837	ENSGMOG00000018995	smarcad1a	100	82.812	Gadus_morhua
ENSAPEG00000003889	smarcad1a	81	60.676	ENSGALG00000037339	SMARCAD1	98	62.760	Gallus_gallus
ENSAPEG00000003889	smarcad1a	100	70.182	ENSGAFG00000013498	smarcad1a	100	70.199	Gambusia_affinis
ENSAPEG00000003889	smarcad1a	83	85.933	ENSGACG00000007327	smarcad1a	100	86.950	Gasterosteus_aculeatus
ENSAPEG00000003889	smarcad1a	92	64.214	ENSGAGG00000008582	SMARCAD1	99	64.214	Gopherus_agassizii
ENSAPEG00000003889	smarcad1a	66	62.483	ENSGGOG00000023001	SMARCAD1	69	62.890	Gorilla_gorilla
ENSAPEG00000003889	smarcad1a	100	79.944	ENSHBUG00000011042	smarcad1a	100	79.906	Haplochromis_burtoni
ENSAPEG00000003889	smarcad1a	95	62.947	ENSHGLG00000005070	SMARCAD1	100	62.947	Heterocephalus_glaber_female
ENSAPEG00000003889	smarcad1a	95	62.947	ENSHGLG00100006812	SMARCAD1	100	62.947	Heterocephalus_glaber_male
ENSAPEG00000003889	smarcad1a	100	63.330	ENSHCOG00000007848	smarcad1a	100	62.345	Hippocampus_comes
ENSAPEG00000003889	smarcad1a	99	57.689	ENSIPUG00000000242	smarcad1a	96	62.719	Ictalurus_punctatus
ENSAPEG00000003889	smarcad1a	78	68.673	ENSIPUG00000022817	smarcad1b	88	72.222	Ictalurus_punctatus
ENSAPEG00000003889	smarcad1a	98	61.423	ENSSTOG00000001227	SMARCAD1	100	63.128	Ictidomys_tridecemlineatus
ENSAPEG00000003889	smarcad1a	96	61.613	ENSJJAG00000022342	Smarcad1	100	61.864	Jaculus_jaculus
ENSAPEG00000003889	smarcad1a	99	77.367	ENSKMAG00000021351	smarcad1a	99	78.009	Kryptolebias_marmoratus
ENSAPEG00000003889	smarcad1a	100	77.341	ENSLBEG00000008088	smarcad1a	99	78.151	Labrus_bergylta
ENSAPEG00000003889	smarcad1a	85	74.551	ENSLOCG00000012909	smarcad1a	100	72.899	Lepisosteus_oculatus
ENSAPEG00000003889	smarcad1a	98	60.411	ENSLAFG00000000040	SMARCAD1	100	62.267	Loxodonta_africana
ENSAPEG00000003889	smarcad1a	96	62.483	ENSMFAG00000042606	SMARCAD1	100	62.890	Macaca_fascicularis
ENSAPEG00000003889	smarcad1a	87	62.483	ENSMMUG00000022242	SMARCAD1	99	62.890	Macaca_mulatta
ENSAPEG00000003889	smarcad1a	96	62.483	ENSMNEG00000038117	SMARCAD1	99	67.508	Macaca_nemestrina
ENSAPEG00000003889	smarcad1a	55	67.508	ENSMLEG00000038333	SMARCAD1	99	67.508	Mandrillus_leucophaeus
ENSAPEG00000003889	smarcad1a	100	81.589	ENSMAMG00000000933	smarcad1a	100	81.776	Mastacembelus_armatus
ENSAPEG00000003889	smarcad1a	100	78.257	ENSMZEG00005005203	smarcad1a	100	78.216	Maylandia_zebra
ENSAPEG00000003889	smarcad1a	84	65.204	ENSMGAG00000005577	SMARCAD1	94	65.204	Meleagris_gallopavo
ENSAPEG00000003889	smarcad1a	67	60.385	ENSMAUG00000008417	Smarcad1	69	62.045	Mesocricetus_auratus
ENSAPEG00000003889	smarcad1a	98	61.088	ENSMICG00000009746	SMARCAD1	100	62.910	Microcebus_murinus
ENSAPEG00000003889	smarcad1a	98	60.385	ENSMOCG00000017142	Smarcad1	100	61.723	Microtus_ochrogaster
ENSAPEG00000003889	smarcad1a	73	86.395	ENSMMOG00000000275	smarcad1a	99	89.031	Mola_mola
ENSAPEG00000003889	smarcad1a	92	65.419	ENSMODG00000019268	SMARCAD1	100	65.419	Monodelphis_domestica
ENSAPEG00000003889	smarcad1a	83	62.375	MGP_CAROLIEiJ_G0028458	-	67	62.375	Mus_caroli
ENSAPEG00000003889	smarcad1a	95	62.375	ENSMUSG00000029920	Smarcad1	100	62.375	Mus_musculus
ENSAPEG00000003889	smarcad1a	95	62.375	MGP_PahariEiJ_G0022198	Smarcad1	100	62.375	Mus_pahari
ENSAPEG00000003889	smarcad1a	95	62.375	MGP_SPRETEiJ_G0029462	Smarcad1	100	62.375	Mus_spretus
ENSAPEG00000003889	smarcad1a	96	62.535	ENSMPUG00000002111	SMARCAD1	100	63.068	Mustela_putorius_furo
ENSAPEG00000003889	smarcad1a	98	61.066	ENSMLUG00000000425	SMARCAD1	100	63.425	Myotis_lucifugus
ENSAPEG00000003889	smarcad1a	98	60.602	ENSNGAG00000000810	Smarcad1	100	62.554	Nannospalax_galili
ENSAPEG00000003889	smarcad1a	77	82.230	ENSNBRG00000012749	smarcad1a	98	82.339	Neolamprologus_brichardi
ENSAPEG00000003889	smarcad1a	66	62.483	ENSNLEG00000014225	SMARCAD1	99	67.508	Nomascus_leucogenys
ENSAPEG00000003889	smarcad1a	96	61.892	ENSODEG00000004334	SMARCAD1	100	62.804	Octodon_degus
ENSAPEG00000003889	smarcad1a	87	89.392	ENSONIG00000015059	smarcad1a	100	84.840	Oreochromis_niloticus
ENSAPEG00000003889	smarcad1a	73	66.566	ENSOANG00000013764	SMARCAD1	99	65.929	Ornithorhynchus_anatinus
ENSAPEG00000003889	smarcad1a	96	62.465	ENSOCUG00000017283	SMARCAD1	100	62.465	Oryctolagus_cuniculus
ENSAPEG00000003889	smarcad1a	100	72.905	ENSORLG00000004869	smarcad1a	100	73.371	Oryzias_latipes
ENSAPEG00000003889	smarcad1a	100	72.905	ENSORLG00020020569	smarcad1a	100	73.464	Oryzias_latipes_hni
ENSAPEG00000003889	smarcad1a	100	73.091	ENSORLG00015009045	smarcad1a	100	73.557	Oryzias_latipes_hsok
ENSAPEG00000003889	smarcad1a	99	72.123	ENSOMEG00000023032	smarcad1a	100	72.123	Oryzias_melastigma
ENSAPEG00000003889	smarcad1a	96	61.304	ENSOGAG00000011444	SMARCAD1	100	62.340	Otolemur_garnettii
ENSAPEG00000003889	smarcad1a	96	62.890	ENSOARG00000017851	SMARCAD1	100	62.890	Ovis_aries
ENSAPEG00000003889	smarcad1a	66	62.483	ENSPPAG00000035715	SMARCAD1	69	62.890	Pan_paniscus
ENSAPEG00000003889	smarcad1a	96	63.210	ENSPPRG00000024756	SMARCAD1	99	67.845	Panthera_pardus
ENSAPEG00000003889	smarcad1a	96	63.031	ENSPTIG00000017868	SMARCAD1	100	63.031	Panthera_tigris_altaica
ENSAPEG00000003889	smarcad1a	66	62.483	ENSPTRG00000023126	SMARCAD1	99	67.508	Pan_troglodytes
ENSAPEG00000003889	smarcad1a	88	65.774	ENSPSIG00000010255	SMARCAD1	99	64.502	Pelodiscus_sinensis
ENSAPEG00000003889	smarcad1a	60	78.727	ENSPMGG00000010735	smarcad1a	97	76.833	Periophthalmus_magnuspinnatus
ENSAPEG00000003889	smarcad1a	96	54.494	ENSPEMG00000001854	Smarcad1	100	54.494	Peromyscus_maniculatus_bairdii
ENSAPEG00000003889	smarcad1a	96	55.556	ENSPMAG00000003516	smarcad1a	99	57.020	Petromyzon_marinus
ENSAPEG00000003889	smarcad1a	76	66.168	ENSPCIG00000008137	SMARCAD1	97	66.168	Phascolarctos_cinereus
ENSAPEG00000003889	smarcad1a	100	72.579	ENSPFOG00000019116	smarcad1a	100	72.489	Poecilia_formosa
ENSAPEG00000003889	smarcad1a	100	72.308	ENSPLAG00000000108	smarcad1a	100	72.217	Poecilia_latipinna
ENSAPEG00000003889	smarcad1a	100	72.489	ENSPMEG00000009155	smarcad1a	100	72.398	Poecilia_mexicana
ENSAPEG00000003889	smarcad1a	100	75.258	ENSPREG00000018185	smarcad1a	100	75.164	Poecilia_reticulata
ENSAPEG00000003889	smarcad1a	96	62.031	ENSPPYG00000014935	SMARCAD1	100	62.429	Pongo_abelii
ENSAPEG00000003889	smarcad1a	68	52.316	ENSPCOG00000020478	SMARCAD1	78	53.791	Propithecus_coquereli
ENSAPEG00000003889	smarcad1a	96	61.732	ENSPVAG00000001760	SMARCAD1	100	62.270	Pteropus_vampyrus
ENSAPEG00000003889	smarcad1a	77	81.907	ENSPNYG00000010087	smarcad1a	97	81.863	Pundamilia_nyererei
ENSAPEG00000003889	smarcad1a	72	72.489	ENSPNAG00000010099	smarcad1b	82	72.303	Pygocentrus_nattereri
ENSAPEG00000003889	smarcad1a	100	58.857	ENSPNAG00000001663	smarcad1a	100	58.427	Pygocentrus_nattereri
ENSAPEG00000003889	smarcad1a	95	62.518	ENSRNOG00000006391	Smarcad1	100	62.518	Rattus_norvegicus
ENSAPEG00000003889	smarcad1a	96	62.483	ENSRBIG00000041989	SMARCAD1	100	62.890	Rhinopithecus_bieti
ENSAPEG00000003889	smarcad1a	96	62.483	ENSRROG00000035309	SMARCAD1	100	62.890	Rhinopithecus_roxellana
ENSAPEG00000003889	smarcad1a	96	63.031	ENSSBOG00000032114	SMARCAD1	99	67.677	Saimiri_boliviensis_boliviensis
ENSAPEG00000003889	smarcad1a	92	65.719	ENSSHAG00000001279	SMARCAD1	100	65.719	Sarcophilus_harrisii
ENSAPEG00000003889	smarcad1a	66	71.690	ENSSFOG00015020909	smarcad1a	94	71.690	Scleropages_formosus
ENSAPEG00000003889	smarcad1a	100	81.844	ENSSMAG00000001326	smarcad1a	100	82.030	Scophthalmus_maximus
ENSAPEG00000003889	smarcad1a	78	84.578	ENSSDUG00000022338	smarcad1a	99	84.110	Seriola_dumerili
ENSAPEG00000003889	smarcad1a	100	81.402	ENSSLDG00000024986	smarcad1a	100	81.402	Seriola_lalandi_dorsalis
ENSAPEG00000003889	smarcad1a	55	68.739	ENSSPUG00000004633	SMARCAD1	99	68.739	Sphenodon_punctatus
ENSAPEG00000003889	smarcad1a	100	92.387	ENSSPAG00000001970	smarcad1a	100	92.387	Stegastes_partitus
ENSAPEG00000003889	smarcad1a	96	62.622	ENSSSCG00000009193	SMARCAD1	100	63.068	Sus_scrofa
ENSAPEG00000003889	smarcad1a	75	61.696	ENSTGUG00000003127	SMARCAD1	96	64.407	Taeniopygia_guttata
ENSAPEG00000003889	smarcad1a	91	84.521	ENSTNIG00000017585	smarcad1a	99	86.733	Tetraodon_nigroviridis
ENSAPEG00000003889	smarcad1a	78	69.246	ENSTBEG00000002789	SMARCAD1	87	69.246	Tupaia_belangeri
ENSAPEG00000003889	smarcad1a	87	61.978	ENSTTRG00000000226	SMARCAD1	88	62.695	Tursiops_truncatus
ENSAPEG00000003889	smarcad1a	96	62.535	ENSUAMG00000022262	SMARCAD1	100	63.068	Ursus_americanus
ENSAPEG00000003889	smarcad1a	96	62.535	ENSUMAG00000004549	SMARCAD1	100	63.068	Ursus_maritimus
ENSAPEG00000003889	smarcad1a	96	62.674	ENSVVUG00000007271	SMARCAD1	100	62.745	Vulpes_vulpes
ENSAPEG00000003889	smarcad1a	79	60.682	ENSXETG00000019214	smarcad1	96	60.682	Xenopus_tropicalis
ENSAPEG00000003889	smarcad1a	75	81.418	ENSXCOG00000005232	smarcad1a	90	82.634	Xiphophorus_couchianus
ENSAPEG00000003889	smarcad1a	100	72.142	ENSXMAG00000015350	smarcad1a	100	72.232	Xiphophorus_maculatus