EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000003893 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 5393 bases
Position: chr20:4799379-4804771
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000005415	zf-C2H2	PF00096.26	2.7e-15	1	2
ENSAPEP00000005415	zf-C2H2	PF00096.26	2.7e-15	2	2
ENSAPEP00000005415	zf-met	PF12874.7	9.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000005557	-	1857	-	ENSAPEP00000005415	251 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000003893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000003893's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000003893	-	61	45.522	ENSAPEG00000007141	-	70	45.522
ENSAPEG00000003893	-	70	45.283	ENSAPEG00000004486	-	97	44.860
ENSAPEG00000003893	-	99	42.857	ENSAPEG00000013585	-	99	42.857
ENSAPEG00000003893	-	55	39.286	ENSAPEG00000019755	-	84	39.286
ENSAPEG00000003893	-	57	37.838	ENSAPEG00000003528	zbtb41	58	38.129
ENSAPEG00000003893	-	65	38.679	ENSAPEG00000004256	-	96	38.679
ENSAPEG00000003893	-	97	43.796	ENSAPEG00000018460	-	90	43.796
ENSAPEG00000003893	-	53	39.098	ENSAPEG00000000869	scrt1b	55	39.098
ENSAPEG00000003893	-	96	40.909	ENSAPEG00000009515	-	93	40.909
ENSAPEG00000003893	-	70	44.086	ENSAPEG00000015593	-	67	44.444
ENSAPEG00000003893	-	99	38.889	ENSAPEG00000009190	-	99	45.522
ENSAPEG00000003893	-	71	44.037	ENSAPEG00000007389	-	99	49.265
ENSAPEG00000003893	-	66	45.522	ENSAPEG00000009835	-	98	46.269
ENSAPEG00000003893	-	69	46.789	ENSAPEG00000006650	-	92	46.789
ENSAPEG00000003893	-	71	44.286	ENSAPEG00000012236	-	60	46.269
ENSAPEG00000003893	-	96	50.000	ENSAPEG00000018332	-	87	50.000
ENSAPEG00000003893	-	55	42.647	ENSAPEG00000013105	-	52	42.647
ENSAPEG00000003893	-	56	40.299	ENSAPEG00000004427	si:ch73-144d13.7	91	40.299
ENSAPEG00000003893	-	71	42.623	ENSAPEG00000011635	-	57	42.623
ENSAPEG00000003893	-	53	39.850	ENSAPEG00000008746	-	60	39.850
ENSAPEG00000003893	-	68	40.268	ENSAPEG00000001546	-	71	47.619
ENSAPEG00000003893	-	60	43.210	ENSAPEG00000016483	-	56	43.210
ENSAPEG00000003893	-	70	47.015	ENSAPEG00000008020	-	97	47.107
ENSAPEG00000003893	-	96	42.336	ENSAPEG00000010478	-	93	42.963
ENSAPEG00000003893	-	60	41.045	ENSAPEG00000013044	-	59	41.045
ENSAPEG00000003893	-	99	45.390	ENSAPEG00000005678	-	76	45.390
ENSAPEG00000003893	-	99	47.761	ENSAPEG00000020501	-	98	47.761
ENSAPEG00000003893	-	90	44.776	ENSAPEG00000012963	-	67	44.776
ENSAPEG00000003893	-	58	42.683	ENSAPEG00000000344	znf319b	61	36.792
ENSAPEG00000003893	-	53	45.378	ENSAPEG00000006584	-	50	45.378
ENSAPEG00000003893	-	98	42.754	ENSAPEG00000018471	-	86	43.519
ENSAPEG00000003893	-	63	46.018	ENSAPEG00000012217	-	59	47.222
ENSAPEG00000003893	-	59	45.161	ENSAPEG00000016601	-	77	42.537
ENSAPEG00000003893	-	65	43.182	ENSAPEG00000001596	-	71	43.182
ENSAPEG00000003893	-	62	41.284	ENSAPEG00000005462	-	77	45.522
ENSAPEG00000003893	-	57	43.284	ENSAPEG00000013097	-	70	43.284
ENSAPEG00000003893	-	55	48.485	ENSAPEG00000014848	-	98	44.118
ENSAPEG00000003893	-	100	41.007	ENSAPEG00000010438	-	99	42.553
ENSAPEG00000003893	-	57	36.937	ENSAPEG00000007647	-	56	36.937
ENSAPEG00000003893	-	53	44.762	ENSAPEG00000012243	-	64	44.762
ENSAPEG00000003893	-	62	46.154	ENSAPEG00000019106	-	52	42.308
ENSAPEG00000003893	-	99	44.361	ENSAPEG00000004189	-	99	44.361
ENSAPEG00000003893	-	99	45.865	ENSAPEG00000015337	-	97	41.353
ENSAPEG00000003893	-	57	44.030	ENSAPEG00000012470	-	72	44.030
ENSAPEG00000003893	-	59	43.210	ENSAPEG00000018271	-	60	43.210
ENSAPEG00000003893	-	58	35.075	ENSAPEG00000000208	ZNF319	71	35.338
ENSAPEG00000003893	-	79	44.361	ENSAPEG00000011020	-	99	44.776
ENSAPEG00000003893	-	74	31.447	ENSAPEG00000016846	prdm5	51	31.447
ENSAPEG00000003893	-	57	44.304	ENSAPEG00000007889	-	77	44.304
ENSAPEG00000003893	-	96	40.909	ENSAPEG00000015310	-	98	40.909
ENSAPEG00000003893	-	56	38.060	ENSAPEG00000002888	-	86	38.532
ENSAPEG00000003893	-	99	40.441	ENSAPEG00000005566	-	98	40.441
ENSAPEG00000003893	-	62	39.535	ENSAPEG00000016196	gfi1b	55	39.535
ENSAPEG00000003893	-	65	39.130	ENSAPEG00000014415	-	82	42.537
ENSAPEG00000003893	-	98	43.810	ENSAPEG00000016118	-	98	44.056
ENSAPEG00000003893	-	73	39.706	ENSAPEG00000002661	-	88	39.706
ENSAPEG00000003893	-	65	42.963	ENSAPEG00000018796	-	72	42.963
ENSAPEG00000003893	-	61	46.667	ENSAPEG00000009826	-	52	45.455
ENSAPEG00000003893	-	63	40.367	ENSAPEG00000002558	-	83	40.367
ENSAPEG00000003893	-	86	43.165	ENSAPEG00000013031	-	85	44.118
ENSAPEG00000003893	-	55	39.552	ENSAPEG00000012599	-	92	39.552
ENSAPEG00000003893	-	61	41.045	ENSAPEG00000009533	-	67	41.791
ENSAPEG00000003893	-	96	50.000	ENSAPEG00000018316	-	87	50.000
ENSAPEG00000003893	-	59	41.860	ENSAPEG00000016462	-	66	44.643
ENSAPEG00000003893	-	96	43.382	ENSAPEG00000011646	-	96	43.382
ENSAPEG00000003893	-	60	45.378	ENSAPEG00000012926	-	71	45.872
ENSAPEG00000003893	-	56	36.567	ENSAPEG00000022774	-	81	37.209
ENSAPEG00000003893	-	56	40.299	ENSAPEG00000013088	-	81	40.299
ENSAPEG00000003893	-	90	44.697	ENSAPEG00000013550	-	95	49.074
ENSAPEG00000003893	-	72	47.059	ENSAPEG00000009997	-	65	47.541
ENSAPEG00000003893	-	67	43.284	ENSAPEG00000016536	-	68	44.030
ENSAPEG00000003893	-	54	38.235	ENSAPEG00000010013	-	58	38.235
ENSAPEG00000003893	-	92	40.566	ENSAPEG00000007175	-	58	40.566
ENSAPEG00000003893	-	62	42.553	ENSAPEG00000019527	-	62	42.742
ENSAPEG00000003893	-	62	44.144	ENSAPEG00000010602	-	77	47.273
ENSAPEG00000003893	-	68	40.299	ENSAPEG00000002585	-	91	40.299
ENSAPEG00000003893	-	56	41.905	ENSAPEG00000001556	-	56	41.905
ENSAPEG00000003893	-	61	35.780	ENSAPEG00000002983	snai2	51	35.780
ENSAPEG00000003893	-	98	30.986	ENSAPEG00000011156	-	84	30.282
ENSAPEG00000003893	-	99	46.269	ENSAPEG00000009381	-	66	46.269
ENSAPEG00000003893	-	67	44.444	ENSAPEG00000009383	-	88	43.284
ENSAPEG00000003893	-	55	44.776	ENSAPEG00000012443	-	73	45.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000003893	-	98	93.985	ENSONIG00000000851	-	68	93.985	Oreochromis_niloticus
ENSAPEG00000003893	-	61	66.667	ENSTNIG00000017000	-	99	75.373	Tetraodon_nigroviridis