EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000004126 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 40955 bases
Position: chr18:20014369-20055323
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000005766	La	PF05383.17	2.5e-21	1	1
ENSAPEP00000005740	La	PF05383.17	2.7e-21	1	1
ENSAPEP00000005731	La	PF05383.17	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000005885	-	4443	-	ENSAPEP00000005731	1098 (aa)	-	-
ENSAPET00000005894	-	4353	-	ENSAPEP00000005740	1068 (aa)	-	-
ENSAPET00000005919	-	4200	-	ENSAPEP00000005766	1017 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000004126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000004126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000004126	larp1b	92	53.116	ENSAPEG00000022246	larp1	96	52.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000004126	larp1b	88	56.155	ENSG00000138709	LARP1B	98	57.375	Homo_sapiens
ENSAPEG00000004126	larp1b	100	94.417	ENSAPOG00000020101	larp1b	100	94.613	Acanthochromis_polyacanthus
ENSAPEG00000004126	larp1b	53	53.368	ENSAMEG00000002748	LARP1B	100	52.941	Ailuropoda_melanoleuca
ENSAPEG00000004126	larp1b	100	78.770	ENSACIG00000023890	larp1b	100	78.674	Amphilophus_citrinellus
ENSAPEG00000004126	larp1b	90	91.830	ENSAOCG00000014268	larp1b	99	92.266	Amphiprion_ocellaris
ENSAPEG00000004126	larp1b	100	84.384	ENSATEG00000017849	larp1b	100	84.772	Anabas_testudineus
ENSAPEG00000004126	larp1b	83	55.037	ENSAPLG00000010129	LARP1B	100	54.624	Anas_platyrhynchos
ENSAPEG00000004126	larp1b	84	58.209	ENSACAG00000011338	LARP1B	99	56.207	Anolis_carolinensis
ENSAPEG00000004126	larp1b	75	49.502	ENSANAG00000034618	LARP1B	91	49.880	Aotus_nancymaae
ENSAPEG00000004126	larp1b	100	81.943	ENSACLG00000011948	larp1b	100	82.126	Astatotilapia_calliptera
ENSAPEG00000004126	larp1b	99	56.870	ENSAMXG00000006805	larp1b	96	59.192	Astyanax_mexicanus
ENSAPEG00000004126	larp1b	87	58.035	ENSBTAG00000012135	LARP1B	95	53.148	Bos_taurus
ENSAPEG00000004126	larp1b	84	57.189	ENSCJAG00000003338	LARP1B	99	58.844	Callithrix_jacchus
ENSAPEG00000004126	larp1b	85	57.844	ENSCAFG00000003831	LARP1B	99	60.211	Canis_familiaris
ENSAPEG00000004126	larp1b	85	57.614	ENSCAFG00020018899	LARP1B	99	57.188	Canis_lupus_dingo
ENSAPEG00000004126	larp1b	85	57.217	ENSCHIG00000023144	LARP1B	99	56.594	Capra_hircus
ENSAPEG00000004126	larp1b	84	56.734	ENSCCAG00000021948	LARP1B	98	57.468	Cebus_capucinus
ENSAPEG00000004126	larp1b	83	56.678	ENSCATG00000013541	LARP1B	98	56.786	Cercocebus_atys
ENSAPEG00000004126	larp1b	83	57.468	ENSCSAG00000003582	LARP1B	98	57.576	Chlorocebus_sabaeus
ENSAPEG00000004126	larp1b	83	53.112	ENSCHOG00000005354	LARP1B	97	53.370	Choloepus_hoffmanni
ENSAPEG00000004126	larp1b	88	56.105	ENSCPBG00000017480	LARP1B	90	57.288	Chrysemys_picta_bellii
ENSAPEG00000004126	larp1b	82	57.191	ENSCANG00000026958	LARP1B	98	57.528	Colobus_angolensis_palliatus
ENSAPEG00000004126	larp1b	100	76.354	ENSCSEG00000013519	larp1b	100	76.555	Cynoglossus_semilaevis
ENSAPEG00000004126	larp1b	100	79.063	ENSCVAG00000005046	larp1b	100	79.155	Cyprinodon_variegatus
ENSAPEG00000004126	larp1b	99	63.058	ENSDARG00000061169	larp1b	92	65.144	Danio_rerio
ENSAPEG00000004126	larp1b	50	50.538	ENSDNOG00000018765	-	98	52.462	Dasypus_novemcinctus
ENSAPEG00000004126	larp1b	75	54.806	ENSETEG00000012497	LARP1B	85	56.185	Echinops_telfairi
ENSAPEG00000004126	larp1b	85	46.324	ENSEBUG00000003668	larp1b	95	45.272	Eptatretus_burgeri
ENSAPEG00000004126	larp1b	85	56.558	ENSEASG00005018106	LARP1B	99	56.085	Equus_asinus_asinus
ENSAPEG00000004126	larp1b	90	55.968	ENSECAG00000001088	LARP1B	88	55.124	Equus_caballus
ENSAPEG00000004126	larp1b	76	63.173	ENSELUG00000023774	larp1b	99	57.775	Esox_lucius
ENSAPEG00000004126	larp1b	52	49.654	ENSFCAG00000014650	-	99	51.277	Felis_catus
ENSAPEG00000004126	larp1b	84	54.900	ENSFALG00000008098	LARP1B	96	55.519	Ficedula_albicollis
ENSAPEG00000004126	larp1b	100	81.538	ENSFHEG00000010264	larp1b	97	81.442	Fundulus_heteroclitus
ENSAPEG00000004126	larp1b	87	70.234	ENSGMOG00000005207	larp1b	87	73.333	Gadus_morhua
ENSAPEG00000004126	larp1b	87	55.498	ENSGALG00000010207	LARP1B	94	53.666	Gallus_gallus
ENSAPEG00000004126	larp1b	89	82.672	ENSGAFG00000012012	larp1b	99	81.549	Gambusia_affinis
ENSAPEG00000004126	larp1b	100	70.730	ENSGACG00000004609	larp1b	100	71.975	Gasterosteus_aculeatus
ENSAPEG00000004126	larp1b	93	54.267	ENSGAGG00000017209	LARP1B	94	55.348	Gopherus_agassizii
ENSAPEG00000004126	larp1b	84	56.290	ENSGGOG00000015900	LARP1B	98	57.267	Gorilla_gorilla
ENSAPEG00000004126	larp1b	100	82.689	ENSHBUG00000009730	larp1b	100	82.882	Haplochromis_burtoni
ENSAPEG00000004126	larp1b	68	80.170	ENSHCOG00000000918	larp1b	96	82.891	Hippocampus_comes
ENSAPEG00000004126	larp1b	96	64.020	ENSIPUG00000012138	larp1b	89	65.696	Ictalurus_punctatus
ENSAPEG00000004126	larp1b	99	78.418	ENSKMAG00000011589	larp1b	100	77.344	Kryptolebias_marmoratus
ENSAPEG00000004126	larp1b	100	82.381	ENSLBEG00000005655	larp1b	100	82.575	Labrus_bergylta
ENSAPEG00000004126	larp1b	92	59.540	ENSLACG00000015247	LARP1B	90	60.159	Latimeria_chalumnae
ENSAPEG00000004126	larp1b	89	59.941	ENSLOCG00000010684	larp1b	98	60.746	Lepisosteus_oculatus
ENSAPEG00000004126	larp1b	83	57.872	ENSMFAG00000002218	LARP1B	98	57.980	Macaca_fascicularis
ENSAPEG00000004126	larp1b	83	57.872	ENSMMUG00000021347	LARP1B	98	57.980	Macaca_mulatta
ENSAPEG00000004126	larp1b	74	62.409	ENSMNEG00000030406	LARP1B	96	62.409	Macaca_nemestrina
ENSAPEG00000004126	larp1b	82	56.952	ENSMLEG00000009306	LARP1B	98	57.063	Mandrillus_leucophaeus
ENSAPEG00000004126	larp1b	99	85.882	ENSMAMG00000000081	larp1b	99	86.078	Mastacembelus_armatus
ENSAPEG00000004126	larp1b	76	84.891	ENSMZEG00005002545	larp1b	100	85.019	Maylandia_zebra
ENSAPEG00000004126	larp1b	80	57.219	ENSMGAG00000004809	LARP1B	99	51.780	Meleagris_gallopavo
ENSAPEG00000004126	larp1b	85	58.199	ENSMICG00000036111	LARP1B	97	59.231	Microcebus_murinus
ENSAPEG00000004126	larp1b	50	38.406	ENSMICG00000028052	-	97	41.684	Microcebus_murinus
ENSAPEG00000004126	larp1b	91	55.042	ENSMODG00000012300	LARP1B	92	53.846	Monodelphis_domestica
ENSAPEG00000004126	larp1b	100	83.786	ENSMALG00000003638	larp1b	100	83.883	Monopterus_albus
ENSAPEG00000004126	larp1b	87	57.933	ENSMPUG00000017365	LARP1B	89	56.256	Mustela_putorius_furo
ENSAPEG00000004126	larp1b	84	56.296	ENSMLUG00000010229	LARP1B	99	56.250	Myotis_lucifugus
ENSAPEG00000004126	larp1b	93	78.463	ENSNBRG00000023846	larp1b	100	78.861	Neolamprologus_brichardi
ENSAPEG00000004126	larp1b	84	55.979	ENSNLEG00000013819	LARP1B	98	57.096	Nomascus_leucogenys
ENSAPEG00000004126	larp1b	63	60.030	ENSMEUG00000010308	LARP1B	74	60.327	Notamacropus_eugenii
ENSAPEG00000004126	larp1b	76	52.893	ENSOPRG00000005478	LARP1B	89	53.920	Ochotona_princeps
ENSAPEG00000004126	larp1b	87	82.143	ENSONIG00000012386	larp1b	99	81.327	Oreochromis_niloticus
ENSAPEG00000004126	larp1b	85	54.747	ENSOCUG00000013330	LARP1B	96	55.905	Oryctolagus_cuniculus
ENSAPEG00000004126	larp1b	97	76.786	ENSORLG00000017954	larp1b	100	76.663	Oryzias_latipes
ENSAPEG00000004126	larp1b	98	76.262	ENSORLG00020013081	larp1b	100	76.077	Oryzias_latipes_hni
ENSAPEG00000004126	larp1b	98	77.515	ENSORLG00015009580	larp1b	100	77.005	Oryzias_latipes_hsok
ENSAPEG00000004126	larp1b	97	79.523	ENSOMEG00000004210	larp1b	100	80.193	Oryzias_melastigma
ENSAPEG00000004126	larp1b	83	58.804	ENSOGAG00000005771	LARP1B	100	58.361	Otolemur_garnettii
ENSAPEG00000004126	larp1b	84	57.233	ENSOARG00000015300	LARP1B	97	57.713	Ovis_aries
ENSAPEG00000004126	larp1b	84	56.503	ENSPPAG00000030439	LARP1B	98	57.484	Pan_paniscus
ENSAPEG00000004126	larp1b	50	50.802	ENSPPRG00000002743	-	99	51.277	Panthera_pardus
ENSAPEG00000004126	larp1b	50	50.893	ENSPTIG00000011225	LARP1B	99	51.277	Panthera_tigris_altaica
ENSAPEG00000004126	larp1b	84	56.397	ENSPTRG00000016437	LARP1B	98	57.375	Pan_troglodytes
ENSAPEG00000004126	larp1b	83	57.872	ENSPANG00000012488	LARP1B	98	57.980	Papio_anubis
ENSAPEG00000004126	larp1b	88	55.349	ENSPKIG00000014360	larp1b	97	54.870	Paramormyrops_kingsleyae
ENSAPEG00000004126	larp1b	87	56.674	ENSPSIG00000012885	LARP1B	99	57.537	Pelodiscus_sinensis
ENSAPEG00000004126	larp1b	77	75.063	ENSPMGG00000007207	larp1b	89	78.104	Periophthalmus_magnuspinnatus
ENSAPEG00000004126	larp1b	60	56.571	ENSPMAG00000002700	larp1b	97	49.432	Petromyzon_marinus
ENSAPEG00000004126	larp1b	79	65.444	ENSPCIG00000026516	LARP1B	99	61.924	Phascolarctos_cinereus
ENSAPEG00000004126	larp1b	62	77.810	ENSPFOG00000022837	-	99	77.522	Poecilia_formosa
ENSAPEG00000004126	larp1b	100	79.965	ENSPFOG00000019519	larp1b	100	79.503	Poecilia_formosa
ENSAPEG00000004126	larp1b	100	80.822	ENSPLAG00000007115	larp1b	100	80.639	Poecilia_latipinna
ENSAPEG00000004126	larp1b	100	81.635	ENSPMEG00000001224	larp1b	100	81.442	Poecilia_mexicana
ENSAPEG00000004126	larp1b	83	55.342	ENSPCAG00000007546	LARP1B	97	56.052	Procavia_capensis
ENSAPEG00000004126	larp1b	83	47.174	ENSPCOG00000021874	LARP1B	97	67.742	Propithecus_coquereli
ENSAPEG00000004126	larp1b	84	54.130	ENSPVAG00000005373	LARP1B	97	54.707	Pteropus_vampyrus
ENSAPEG00000004126	larp1b	76	83.228	ENSPNYG00000017357	larp1b	100	83.228	Pundamilia_nyererei
ENSAPEG00000004126	larp1b	99	61.437	ENSPNAG00000008823	larp1b	92	63.906	Pygocentrus_nattereri
ENSAPEG00000004126	larp1b	50	49.821	ENSRBIG00000039982	-	99	50.986	Rhinopithecus_bieti
ENSAPEG00000004126	larp1b	83	57.655	ENSRROG00000030771	LARP1B	98	57.980	Rhinopithecus_roxellana
ENSAPEG00000004126	larp1b	61	53.182	ENSSHAG00000014474	LARP1B	99	53.813	Sarcophilus_harrisii
ENSAPEG00000004126	larp1b	85	84.865	ENSSMAG00000006347	larp1b	99	81.791	Scophthalmus_maximus
ENSAPEG00000004126	larp1b	100	85.493	ENSSDUG00000004182	larp1b	100	86.074	Seriola_dumerili
ENSAPEG00000004126	larp1b	98	78.308	ENSSLDG00000014613	larp1b	99	83.051	Seriola_lalandi_dorsalis
ENSAPEG00000004126	larp1b	80	58.783	ENSSPUG00000011837	LARP1B	87	69.462	Sphenodon_punctatus
ENSAPEG00000004126	larp1b	100	91.320	ENSSPAG00000017772	larp1b	100	91.505	Stegastes_partitus
ENSAPEG00000004126	larp1b	90	55.567	ENSSSCG00000034280	LARP1B	98	77.011	Sus_scrofa
ENSAPEG00000004126	larp1b	81	58.076	ENSTGUG00000002098	-	92	60.356	Taeniopygia_guttata
ENSAPEG00000004126	larp1b	99	77.410	ENSTRUG00000005612	larp1b	99	75.763	Takifugu_rubripes
ENSAPEG00000004126	larp1b	87	80.734	ENSTNIG00000012398	larp1b	99	77.031	Tetraodon_nigroviridis
ENSAPEG00000004126	larp1b	62	52.129	ENSTBEG00000004177	LARP1B	75	51.515	Tupaia_belangeri
ENSAPEG00000004126	larp1b	76	57.360	ENSTTRG00000012984	LARP1B	89	58.575	Tursiops_truncatus
ENSAPEG00000004126	larp1b	85	57.417	ENSUMAG00000007373	LARP1B	99	57.417	Ursus_maritimus
ENSAPEG00000004126	larp1b	84	47.544	ENSVPAG00000007223	LARP1B	98	47.807	Vicugna_pacos
ENSAPEG00000004126	larp1b	85	57.737	ENSVVUG00000011307	LARP1B	99	57.714	Vulpes_vulpes
ENSAPEG00000004126	larp1b	91	51.892	ENSXETG00000022512	larp1b	93	53.122	Xenopus_tropicalis
ENSAPEG00000004126	larp1b	90	72.082	ENSXCOG00000004435	larp1b	95	74.685	Xiphophorus_couchianus
ENSAPEG00000004126	larp1b	100	81.961	ENSXMAG00000008150	larp1b	100	80.346	Xiphophorus_maculatus