EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000004179 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 2417 bases
Position: chr8:8013384-8015800
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000005799	RRM_1	PF00076.22	4.5e-36	1	2
ENSAPEP00000005799	RRM_1	PF00076.22	4.5e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000005953	-	1204	-	ENSAPEP00000005799	333 (aa)	-	UPI000C30163C

Gene Model

Click here to download ENSAPEG00000004179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000004179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000004179	-	52	37.059	ENSAPEG00000017599	hnrnpaba	73	35.321
ENSAPEG00000004179	-	72	33.054	ENSAPEG00000005603	hnrnpd	71	38.627
ENSAPEG00000004179	-	80	35.106	ENSAPEG00000007706	msi2a	58	38.624
ENSAPEG00000004179	-	53	56.000	ENSAPEG00000002224	-	86	52.885
ENSAPEG00000004179	-	54	84.916	ENSAPEG00000022522	hnrnpa3	57	77.570
ENSAPEG00000004179	-	54	41.436	ENSAPEG00000003245	MSI1	54	40.212
ENSAPEG00000004179	-	54	59.748	ENSAPEG00000002274	-	95	59.748
ENSAPEG00000004179	-	61	37.438	ENSAPEG00000001689	-	69	37.339
ENSAPEG00000004179	-	55	34.000	ENSAPEG00000018093	tardbpl	60	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000004179	-	100	97.612	ENSAPOG00000019369	-	100	97.612	Acanthochromis_polyacanthus
ENSAPEG00000004179	-	53	56.571	ENSACIG00000021815	-	95	54.872	Amphilophus_citrinellus
ENSAPEG00000004179	-	100	100.000	ENSAOCG00000005289	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000004179	-	67	95.982	ENSATEG00000022918	hnrnpa1a	92	94.416	Anabas_testudineus
ENSAPEG00000004179	-	53	59.119	ENSATEG00000003423	-	75	59.119	Anabas_testudineus
ENSAPEG00000004179	-	90	89.803	ENSACLG00000006940	-	68	94.273	Astatotilapia_calliptera
ENSAPEG00000004179	-	54	63.277	ENSAMXG00000037730	-	56	63.351	Astyanax_mexicanus
ENSAPEG00000004179	-	53	54.651	ENSCSEG00000014051	-	73	53.107	Cynoglossus_semilaevis
ENSAPEG00000004179	-	67	89.520	ENSCSEG00000007589	hnrnpa1a	83	83.628	Cynoglossus_semilaevis
ENSAPEG00000004179	-	68	95.111	ENSCVAG00000012637	hnrnpa1a	66	95.516	Cyprinodon_variegatus
ENSAPEG00000004179	-	57	80.208	ENSDARG00000011020	hnrnpa1a	58	75.000	Danio_rerio
ENSAPEG00000004179	-	59	55.779	ENSDORG00000026425	-	61	54.930	Dipodomys_ordii
ENSAPEG00000004179	-	58	88.144	ENSELUG00000007372	-	53	89.062	Esox_lucius
ENSAPEG00000004179	-	55	61.667	ENSGMOG00000020353	-	98	61.905	Gadus_morhua
ENSAPEG00000004179	-	55	88.587	ENSGMOG00000017950	hnrnpa1a	50	88.108	Gadus_morhua
ENSAPEG00000004179	-	68	96.889	ENSGAFG00000007751	-	66	97.309	Gambusia_affinis
ENSAPEG00000004179	-	65	47.222	ENSGAFG00000016803	-	63	52.113	Gambusia_affinis
ENSAPEG00000004179	-	63	88.202	ENSGACG00000009435	-	60	90.055	Gasterosteus_aculeatus
ENSAPEG00000004179	-	90	89.439	ENSHBUG00000005647	hnrnpa1a	91	89.439	Haplochromis_burtoni
ENSAPEG00000004179	-	58	84.021	ENSIPUG00000022440	-	74	84.393	Ictalurus_punctatus
ENSAPEG00000004179	-	60	81.095	ENSIPUG00000002023	hnrnpa1a	75	83.889	Ictalurus_punctatus
ENSAPEG00000004179	-	55	62.360	ENSIPUG00000001991	-	80	61.780	Ictalurus_punctatus
ENSAPEG00000004179	-	54	65.193	ENSJJAG00000009178	-	89	52.716	Jaculus_jaculus
ENSAPEG00000004179	-	100	89.583	ENSKMAG00000020859	-	89	91.667	Kryptolebias_marmoratus
ENSAPEG00000004179	-	67	91.630	ENSLBEG00000010010	hnrnpa1a	91	81.587	Labrus_bergylta
ENSAPEG00000004179	-	63	70.811	ENSMFAG00000028351	-	65	65.198	Macaca_fascicularis
ENSAPEG00000004179	-	67	95.089	ENSMAMG00000007606	-	66	95.089	Mastacembelus_armatus
ENSAPEG00000004179	-	90	89.439	ENSMZEG00005027173	hnrnpa1a	91	89.439	Maylandia_zebra
ENSAPEG00000004179	-	83	74.909	ENSMMOG00000008251	hnrnpa1a	93	86.344	Mola_mola
ENSAPEG00000004179	-	67	95.089	ENSMALG00000014091	hnrnpa1a	65	95.089	Monopterus_albus
ENSAPEG00000004179	-	53	56.571	ENSMALG00000008886	-	93	56.021	Monopterus_albus
ENSAPEG00000004179	-	60	56.345	ENSNBRG00000014469	-	91	56.345	Neolamprologus_brichardi
ENSAPEG00000004179	-	90	84.158	ENSNBRG00000018441	-	68	94.273	Neolamprologus_brichardi
ENSAPEG00000004179	-	54	52.601	ENSORLG00000029240	-	94	52.601	Oryzias_latipes
ENSAPEG00000004179	-	100	89.222	ENSORLG00000008001	-	68	95.982	Oryzias_latipes
ENSAPEG00000004179	-	89	39.731	ENSORLG00020006043	-	59	51.445	Oryzias_latipes_hni
ENSAPEG00000004179	-	75	52.601	ENSORLG00020022498	-	80	52.601	Oryzias_latipes_hni
ENSAPEG00000004179	-	100	89.222	ENSORLG00020006582	hnrnpa1a	98	93.780	Oryzias_latipes_hni
ENSAPEG00000004179	-	100	89.222	ENSORLG00015022294	-	68	95.982	Oryzias_latipes_hsok
ENSAPEG00000004179	-	100	86.826	ENSOMEG00000015959	-	68	95.982	Oryzias_melastigma
ENSAPEG00000004179	-	68	82.379	ENSPMGG00000011804	hnrnpa1a	79	87.963	Periophthalmus_magnuspinnatus
ENSAPEG00000004179	-	56	56.284	ENSPMGG00000016392	-	93	57.222	Periophthalmus_magnuspinnatus
ENSAPEG00000004179	-	68	96.889	ENSPFOG00000001825	-	66	97.309	Poecilia_formosa
ENSAPEG00000004179	-	68	96.889	ENSPMEG00000002425	-	66	97.309	Poecilia_mexicana
ENSAPEG00000004179	-	58	57.979	ENSPNYG00000020729	-	95	57.979	Pundamilia_nyererei
ENSAPEG00000004179	-	90	65.798	ENSPNAG00000021630	-	60	82.143	Pygocentrus_nattereri
ENSAPEG00000004179	-	56	82.447	ENSPNAG00000007752	hnrnpa1a	86	77.315	Pygocentrus_nattereri
ENSAPEG00000004179	-	54	58.434	ENSSMAG00000010279	-	93	58.434	Scophthalmus_maximus
ENSAPEG00000004179	-	63	91.943	ENSSMAG00000004641	hnrnpa1a	90	76.636	Scophthalmus_maximus
ENSAPEG00000004179	-	52	56.322	ENSSMAG00000010246	-	83	55.851	Scophthalmus_maximus
ENSAPEG00000004179	-	89	96.842	ENSSDUG00000013908	hnrnpa1a	93	88.106	Seriola_dumerili
ENSAPEG00000004179	-	53	60.234	ENSSDUG00000002431	-	81	60.234	Seriola_dumerili
ENSAPEG00000004179	-	89	96.739	ENSSLDG00000003718	hnrnpa1a	93	88.106	Seriola_lalandi_dorsalis
ENSAPEG00000004179	-	99	94.311	ENSSPAG00000018518	-	99	94.311	Stegastes_partitus
ENSAPEG00000004179	-	67	88.393	ENSTRUG00000020491	-	69	88.496	Takifugu_rubripes
ENSAPEG00000004179	-	77	44.186	ENSTNIG00000007398	-	89	54.113	Tetraodon_nigroviridis
ENSAPEG00000004179	-	57	97.368	ENSXCOG00000009001	-	93	93.578	Xiphophorus_couchianus
ENSAPEG00000004179	-	68	96.444	ENSXMAG00000008076	-	65	96.861	Xiphophorus_maculatus