EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000004361 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 7319 bases
Position: chr21:13468045-13475363
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000006101	RRM_1	PF00076.22	3.4e-07	1	1
ENSAPEP00000006085	RRM_1	PF00076.22	4.1e-07	1	1
ENSAPEP00000006071	RRM_1	PF00076.22	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000006231	-	2016	-	ENSAPEP00000006071	585 (aa)	-	-
ENSAPET00000006245	-	1908	-	ENSAPEP00000006085	549 (aa)	-	-
ENSAPET00000006262	-	1497	-	ENSAPEP00000006101	498 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000004361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000004361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000004361	-	88	31.685	ENSAPEG00000015375	CPSF7	60	52.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000004361	-	100	99.829	ENSAPOG00000009771	-	100	99.829	Acanthochromis_polyacanthus
ENSAPEG00000004361	-	100	99.829	ENSAOCG00000024134	-	100	99.829	Amphiprion_ocellaris
ENSAPEG00000004361	-	100	98.000	ENSATEG00000014806	-	100	98.000	Anabas_testudineus
ENSAPEG00000004361	-	73	80.392	ENSAPLG00000010887	CPSF6	76	83.784	Anas_platyrhynchos
ENSAPEG00000004361	-	95	43.002	ENSCPBG00000017691	-	72	54.857	Chrysemys_picta_bellii
ENSAPEG00000004361	-	95	45.399	ENSDORG00000000998	-	73	53.889	Dipodomys_ordii
ENSAPEG00000004361	-	94	82.218	ENSGALG00000019355	CPSF6	77	83.908	Gallus_gallus