EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000004564 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8726 bases
Position: chr4:3193800-3202525
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000006397	PRP4	PF08799.11	2e-13	1	1
ENSAPEP00000006388	PRP4	PF08799.11	2.1e-13	1	1
ENSAPEP00000006397	Prp18	PF02840.15	1.3e-62	1	1
ENSAPEP00000006388	Prp18	PF02840.15	1.3e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000006557	-	2568	-	ENSAPEP00000006388	350 (aa)	-	UPI000C310DB5
ENSAPET00000006566	-	2541	-	ENSAPEP00000006397	341 (aa)	-	UPI000C31B662

Gene Model

Click here to download ENSAPEG00000004564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000004564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000004564	prpf18	100	85.965	ENSG00000165630	PRPF18	100	85.965	Homo_sapiens
ENSAPEG00000004564	prpf18	100	99.413	ENSAPOG00000024177	prpf18	100	99.413	Acanthochromis_polyacanthus
ENSAPEG00000004564	prpf18	100	85.380	ENSAMEG00000013591	-	100	85.380	Ailuropoda_melanoleuca
ENSAPEG00000004564	prpf18	100	95.601	ENSACIG00000001186	prpf18	100	95.601	Amphilophus_citrinellus
ENSAPEG00000004564	prpf18	98	100.000	ENSAOCG00000006572	prpf18	94	100.000	Amphiprion_ocellaris
ENSAPEG00000004564	prpf18	100	96.774	ENSATEG00000000303	prpf18	100	96.774	Anabas_testudineus
ENSAPEG00000004564	prpf18	99	83.529	ENSAPLG00000003387	-	99	83.529	Anas_platyrhynchos
ENSAPEG00000004564	prpf18	100	85.465	ENSACAG00000000818	-	100	85.465	Anolis_carolinensis
ENSAPEG00000004564	prpf18	100	85.965	ENSANAG00000037445	-	100	85.965	Aotus_nancymaae
ENSAPEG00000004564	prpf18	100	95.015	ENSACLG00000026296	prpf18	100	95.015	Astatotilapia_calliptera
ENSAPEG00000004564	prpf18	100	90.286	ENSAMXG00000012848	prpf18	100	90.286	Astyanax_mexicanus
ENSAPEG00000004564	prpf18	100	85.088	ENSBTAG00000017244	PRPF18	100	85.088	Bos_taurus
ENSAPEG00000004564	prpf18	98	40.517	WBGene00009320	F32B6.3	97	39.831	Caenorhabditis_elegans
ENSAPEG00000004564	prpf18	100	85.965	ENSCJAG00000009432	-	100	85.965	Callithrix_jacchus
ENSAPEG00000004564	prpf18	100	85.380	ENSCAFG00000004735	-	100	85.380	Canis_familiaris
ENSAPEG00000004564	prpf18	100	85.380	ENSCAFG00020007712	-	100	85.380	Canis_lupus_dingo
ENSAPEG00000004564	prpf18	100	85.088	ENSCHIG00000000499	-	100	85.088	Capra_hircus
ENSAPEG00000004564	prpf18	100	85.380	ENSTSYG00000003517	-	100	85.380	Carlito_syrichta
ENSAPEG00000004564	prpf18	100	85.965	ENSCPOG00000021069	-	100	85.965	Cavia_porcellus
ENSAPEG00000004564	prpf18	100	85.965	ENSCCAG00000036822	-	100	85.965	Cebus_capucinus
ENSAPEG00000004564	prpf18	100	75.146	ENSCATG00000016633	-	100	75.146	Cercocebus_atys
ENSAPEG00000004564	prpf18	100	85.380	ENSCLAG00000011770	-	100	85.380	Chinchilla_lanigera
ENSAPEG00000004564	prpf18	100	84.330	ENSCSAG00000013109	-	100	84.330	Chlorocebus_sabaeus
ENSAPEG00000004564	prpf18	100	81.180	ENSCPBG00000003100	-	100	82.022	Chrysemys_picta_bellii
ENSAPEG00000004564	prpf18	99	56.176	ENSCING00000020481	-	97	56.176	Ciona_intestinalis
ENSAPEG00000004564	prpf18	99	55.977	ENSCSAVG00000010546	-	99	55.685	Ciona_savignyi
ENSAPEG00000004564	prpf18	100	85.965	ENSCANG00000034900	-	100	85.965	Colobus_angolensis_palliatus
ENSAPEG00000004564	prpf18	100	85.380	ENSCGRG00001023665	Prpf18	100	85.380	Cricetulus_griseus_chok1gshd
ENSAPEG00000004564	prpf18	100	85.380	ENSCGRG00000014690	Prpf18	100	85.380	Cricetulus_griseus_crigri
ENSAPEG00000004564	prpf18	100	92.082	ENSCSEG00000005536	prpf18	99	92.082	Cynoglossus_semilaevis
ENSAPEG00000004564	prpf18	100	94.135	ENSCVAG00000012401	prpf18	100	94.135	Cyprinodon_variegatus
ENSAPEG00000004564	prpf18	100	91.228	ENSDARG00000058306	prpf18	100	91.228	Danio_rerio
ENSAPEG00000004564	prpf18	100	85.380	ENSDNOG00000035607	-	100	85.380	Dasypus_novemcinctus
ENSAPEG00000004564	prpf18	100	85.088	ENSDORG00000000858	Prpf18	100	85.088	Dipodomys_ordii
ENSAPEG00000004564	prpf18	99	53.602	FBgn0027784	Prp18	98	52.663	Drosophila_melanogaster
ENSAPEG00000004564	prpf18	100	76.608	ENSETEG00000015060	-	100	76.608	Echinops_telfairi
ENSAPEG00000004564	prpf18	100	69.452	ENSEBUG00000016502	prpf18	99	68.588	Eptatretus_burgeri
ENSAPEG00000004564	prpf18	100	85.673	ENSEASG00005019373	-	100	85.673	Equus_asinus_asinus
ENSAPEG00000004564	prpf18	100	85.673	ENSECAG00000006997	PRPF18	100	85.673	Equus_caballus
ENSAPEG00000004564	prpf18	92	51.582	ENSEEUG00000001171	-	100	51.582	Erinaceus_europaeus
ENSAPEG00000004564	prpf18	100	89.213	ENSELUG00000022190	prpf18	100	89.213	Esox_lucius
ENSAPEG00000004564	prpf18	100	85.088	ENSFCAG00000004436	-	100	85.088	Felis_catus
ENSAPEG00000004564	prpf18	93	80.923	ENSFALG00000001912	-	97	81.231	Ficedula_albicollis
ENSAPEG00000004564	prpf18	94	87.812	ENSFDAG00000014026	-	100	87.812	Fukomys_damarensis
ENSAPEG00000004564	prpf18	99	58.261	ENSFDAG00000010713	-	97	58.261	Fukomys_damarensis
ENSAPEG00000004564	prpf18	80	95.238	ENSFHEG00000020125	prpf18	98	95.131	Fundulus_heteroclitus
ENSAPEG00000004564	prpf18	99	88.235	ENSGMOG00000012210	prpf18	99	88.235	Gadus_morhua
ENSAPEG00000004564	prpf18	100	84.503	ENSGALG00000043593	-	100	84.503	Gallus_gallus
ENSAPEG00000004564	prpf18	100	93.255	ENSGAFG00000006034	prpf18	100	93.255	Gambusia_affinis
ENSAPEG00000004564	prpf18	100	91.496	ENSGACG00000012232	prpf18	100	91.496	Gasterosteus_aculeatus
ENSAPEG00000004564	prpf18	100	85.088	ENSGAGG00000016878	-	100	85.088	Gopherus_agassizii
ENSAPEG00000004564	prpf18	92	84.810	ENSGGOG00000025188	-	96	84.810	Gorilla_gorilla
ENSAPEG00000004564	prpf18	100	95.015	ENSHBUG00000010264	prpf18	100	95.015	Haplochromis_burtoni
ENSAPEG00000004564	prpf18	100	85.380	ENSHGLG00000018534	PRPF18	100	85.380	Heterocephalus_glaber_female
ENSAPEG00000004564	prpf18	94	87.500	ENSHGLG00100012161	-	98	87.500	Heterocephalus_glaber_male
ENSAPEG00000004564	prpf18	100	96.774	ENSHCOG00000015987	prpf18	100	96.774	Hippocampus_comes
ENSAPEG00000004564	prpf18	100	84.136	ENSIPUG00000007432	prpf18	100	84.136	Ictalurus_punctatus
ENSAPEG00000004564	prpf18	100	85.088	ENSSTOG00000008735	-	100	85.088	Ictidomys_tridecemlineatus
ENSAPEG00000004564	prpf18	100	85.965	ENSJJAG00000024041	-	100	85.965	Jaculus_jaculus
ENSAPEG00000004564	prpf18	100	63.557	ENSJJAG00000015191	-	100	63.557	Jaculus_jaculus
ENSAPEG00000004564	prpf18	100	93.548	ENSKMAG00000012124	prpf18	100	93.548	Kryptolebias_marmoratus
ENSAPEG00000004564	prpf18	98	91.369	ENSLBEG00000028466	prpf18	99	91.369	Labrus_bergylta
ENSAPEG00000004564	prpf18	100	84.503	ENSLACG00000009885	prpf18	100	84.795	Latimeria_chalumnae
ENSAPEG00000004564	prpf18	100	89.181	ENSLOCG00000016736	prpf18	100	89.181	Lepisosteus_oculatus
ENSAPEG00000004564	prpf18	100	85.965	ENSLAFG00000007753	-	100	85.965	Loxodonta_africana
ENSAPEG00000004564	prpf18	100	85.965	ENSMFAG00000000540	-	100	85.965	Macaca_fascicularis
ENSAPEG00000004564	prpf18	100	85.965	ENSMMUG00000015071	PRPF18	93	93.377	Macaca_mulatta
ENSAPEG00000004564	prpf18	100	85.965	ENSMNEG00000024679	-	100	85.965	Macaca_nemestrina
ENSAPEG00000004564	prpf18	100	70.760	ENSMLEG00000031715	-	100	70.760	Mandrillus_leucophaeus
ENSAPEG00000004564	prpf18	100	95.015	ENSMAMG00000006610	prpf18	100	95.015	Mastacembelus_armatus
ENSAPEG00000004564	prpf18	100	95.015	ENSMZEG00005019392	prpf18	100	95.015	Maylandia_zebra
ENSAPEG00000004564	prpf18	100	84.503	ENSMGAG00000005023	-	100	84.503	Meleagris_gallopavo
ENSAPEG00000004564	prpf18	100	86.257	ENSMICG00000006572	-	100	86.257	Microcebus_murinus
ENSAPEG00000004564	prpf18	100	85.965	ENSMOCG00000021468	Prpf18	100	85.965	Microtus_ochrogaster
ENSAPEG00000004564	prpf18	100	93.842	ENSMMOG00000013012	prpf18	100	93.842	Mola_mola
ENSAPEG00000004564	prpf18	100	77.485	ENSMODG00000024043	-	100	77.485	Monodelphis_domestica
ENSAPEG00000004564	prpf18	96	80.178	ENSMODG00000016902	-	92	80.178	Monodelphis_domestica
ENSAPEG00000004564	prpf18	100	87.209	ENSMALG00000005486	prpf18	100	87.209	Monopterus_albus
ENSAPEG00000004564	prpf18	100	85.380	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSAPEG00000004564	prpf18	100	85.673	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSAPEG00000004564	prpf18	100	85.673	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSAPEG00000004564	prpf18	100	85.380	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSAPEG00000004564	prpf18	100	85.088	ENSMPUG00000000938	-	100	85.088	Mustela_putorius_furo
ENSAPEG00000004564	prpf18	100	85.088	ENSMLUG00000009200	-	100	85.088	Myotis_lucifugus
ENSAPEG00000004564	prpf18	100	85.965	ENSNGAG00000012500	-	100	85.965	Nannospalax_galili
ENSAPEG00000004564	prpf18	68	83.190	ENSNGAG00000023550	-	82	83.913	Nannospalax_galili
ENSAPEG00000004564	prpf18	100	95.308	ENSNBRG00000001778	prpf18	100	95.308	Neolamprologus_brichardi
ENSAPEG00000004564	prpf18	100	85.965	ENSNLEG00000012186	-	100	85.965	Nomascus_leucogenys
ENSAPEG00000004564	prpf18	76	73.359	ENSMEUG00000005032	-	75	71.815	Notamacropus_eugenii
ENSAPEG00000004564	prpf18	77	66.415	ENSOPRG00000002153	-	100	66.415	Ochotona_princeps
ENSAPEG00000004564	prpf18	100	85.088	ENSODEG00000003770	-	100	85.088	Octodon_degus
ENSAPEG00000004564	prpf18	98	94.611	ENSONIG00000014854	prpf18	96	94.611	Oreochromis_niloticus
ENSAPEG00000004564	prpf18	100	85.088	ENSOANG00000015404	-	100	85.088	Ornithorhynchus_anatinus
ENSAPEG00000004564	prpf18	100	85.673	ENSOCUG00000027756	-	96	86.544	Oryctolagus_cuniculus
ENSAPEG00000004564	prpf18	100	93.714	ENSORLG00000010293	prpf18	100	93.714	Oryzias_latipes
ENSAPEG00000004564	prpf18	100	93.842	ENSORLG00020001530	prpf18	100	93.842	Oryzias_latipes_hni
ENSAPEG00000004564	prpf18	100	93.548	ENSORLG00015013705	prpf18	100	93.548	Oryzias_latipes_hsok
ENSAPEG00000004564	prpf18	100	95.601	ENSOMEG00000009167	prpf18	100	95.601	Oryzias_melastigma
ENSAPEG00000004564	prpf18	100	85.088	ENSOGAG00000007294	-	100	85.088	Otolemur_garnettii
ENSAPEG00000004564	prpf18	100	83.476	ENSOARG00000006243	-	100	83.476	Ovis_aries
ENSAPEG00000004564	prpf18	100	85.965	ENSPPAG00000041959	-	100	85.965	Pan_paniscus
ENSAPEG00000004564	prpf18	100	85.088	ENSPPRG00000000107	-	100	85.088	Panthera_pardus
ENSAPEG00000004564	prpf18	100	85.088	ENSPTIG00000021094	-	100	85.088	Panthera_tigris_altaica
ENSAPEG00000004564	prpf18	100	85.965	ENSPTRG00000002306	PRPF18	100	85.965	Pan_troglodytes
ENSAPEG00000004564	prpf18	100	85.673	ENSPANG00000023346	-	100	85.673	Papio_anubis
ENSAPEG00000004564	prpf18	100	87.464	ENSPKIG00000014128	prpf18	96	87.464	Paramormyrops_kingsleyae
ENSAPEG00000004564	prpf18	100	85.088	ENSPSIG00000016064	-	100	85.088	Pelodiscus_sinensis
ENSAPEG00000004564	prpf18	100	87.427	ENSPMGG00000016486	prpf18	100	87.427	Periophthalmus_magnuspinnatus
ENSAPEG00000004564	prpf18	100	85.673	ENSPEMG00000013704	Prpf18	100	85.673	Peromyscus_maniculatus_bairdii
ENSAPEG00000004564	prpf18	100	74.928	ENSPMAG00000000204	prpf18	100	74.928	Petromyzon_marinus
ENSAPEG00000004564	prpf18	92	84.494	ENSPCIG00000012963	-	99	84.494	Phascolarctos_cinereus
ENSAPEG00000004564	prpf18	100	92.571	ENSPFOG00000017611	prpf18	100	92.571	Poecilia_formosa
ENSAPEG00000004564	prpf18	100	93.255	ENSPLAG00000000369	prpf18	100	93.255	Poecilia_latipinna
ENSAPEG00000004564	prpf18	100	93.548	ENSPMEG00000005183	prpf18	100	93.548	Poecilia_mexicana
ENSAPEG00000004564	prpf18	100	92.669	ENSPREG00000015232	prpf18	100	92.669	Poecilia_reticulata
ENSAPEG00000004564	prpf18	100	85.673	ENSPPYG00000002101	PRPF18	100	85.673	Pongo_abelii
ENSAPEG00000004564	prpf18	100	67.836	ENSPCAG00000010833	-	100	67.836	Procavia_capensis
ENSAPEG00000004564	prpf18	100	80.702	ENSPCOG00000013057	-	100	80.702	Propithecus_coquereli
ENSAPEG00000004564	prpf18	100	52.047	ENSPVAG00000002947	-	100	52.047	Pteropus_vampyrus
ENSAPEG00000004564	prpf18	100	94.721	ENSPNYG00000003554	prpf18	100	94.721	Pundamilia_nyererei
ENSAPEG00000004564	prpf18	100	89.744	ENSPNAG00000023151	prpf18	100	89.744	Pygocentrus_nattereri
ENSAPEG00000004564	prpf18	100	85.380	ENSRNOG00000018396	Prpf18	100	85.380	Rattus_norvegicus
ENSAPEG00000004564	prpf18	100	86.257	ENSRBIG00000028028	-	100	86.257	Rhinopithecus_bieti
ENSAPEG00000004564	prpf18	100	85.965	ENSRROG00000040695	-	100	85.965	Rhinopithecus_roxellana
ENSAPEG00000004564	prpf18	100	85.965	ENSSBOG00000034482	-	100	85.965	Saimiri_boliviensis_boliviensis
ENSAPEG00000004564	prpf18	100	85.380	ENSSHAG00000016463	-	100	85.380	Sarcophilus_harrisii
ENSAPEG00000004564	prpf18	100	71.345	ENSSHAG00000009669	-	100	71.345	Sarcophilus_harrisii
ENSAPEG00000004564	prpf18	77	45.076	ENSSFOG00015021154	-	89	48.069	Scleropages_formosus
ENSAPEG00000004564	prpf18	98	86.087	ENSSFOG00015022118	prpf18	100	80.980	Scleropages_formosus
ENSAPEG00000004564	prpf18	100	92.375	ENSSMAG00000005308	prpf18	100	92.375	Scophthalmus_maximus
ENSAPEG00000004564	prpf18	100	97.947	ENSSDUG00000015428	prpf18	100	97.947	Seriola_dumerili
ENSAPEG00000004564	prpf18	100	97.654	ENSSLDG00000023989	prpf18	100	97.654	Seriola_lalandi_dorsalis
ENSAPEG00000004564	prpf18	100	57.018	ENSSARG00000005307	-	100	57.018	Sorex_araneus
ENSAPEG00000004564	prpf18	100	85.088	ENSSPUG00000002619	-	100	85.088	Sphenodon_punctatus
ENSAPEG00000004564	prpf18	100	98.240	ENSSPAG00000019502	prpf18	100	98.240	Stegastes_partitus
ENSAPEG00000004564	prpf18	100	85.380	ENSSSCG00000026354	-	100	85.380	Sus_scrofa
ENSAPEG00000004564	prpf18	100	84.211	ENSTGUG00000002286	-	100	84.211	Taeniopygia_guttata
ENSAPEG00000004564	prpf18	100	90.616	ENSTRUG00000011278	prpf18	100	90.616	Takifugu_rubripes
ENSAPEG00000004564	prpf18	100	90.616	ENSTNIG00000000911	prpf18	100	90.616	Tetraodon_nigroviridis
ENSAPEG00000004564	prpf18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSAPEG00000004564	prpf18	100	86.257	ENSTTRG00000011117	PRPF18	100	86.257	Tursiops_truncatus
ENSAPEG00000004564	prpf18	91	88.103	ENSUAMG00000001815	-	93	88.103	Ursus_americanus
ENSAPEG00000004564	prpf18	100	80.409	ENSUMAG00000012329	-	100	80.409	Ursus_maritimus
ENSAPEG00000004564	prpf18	100	79.825	ENSVPAG00000011486	-	100	79.825	Vicugna_pacos
ENSAPEG00000004564	prpf18	100	85.380	ENSVVUG00000005453	-	100	85.380	Vulpes_vulpes
ENSAPEG00000004564	prpf18	100	76.812	ENSXETG00000024057	prpf18	100	77.101	Xenopus_tropicalis
ENSAPEG00000004564	prpf18	100	93.294	ENSXCOG00000020414	prpf18	100	93.294	Xiphophorus_couchianus
ENSAPEG00000004564	prpf18	100	93.842	ENSXMAG00000004713	prpf18	91	93.842	Xiphophorus_maculatus