EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000004873 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 4747 bases
Position: chr7:19770241-19774987
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000006866	RRM_1	PF00076.22	2.6e-12	1	1
ENSAPEP00000006858	RRM_1	PF00076.22	6.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000007042	-	456	-	ENSAPEP00000006866	151 (aa)	-	-
ENSAPET00000007033	-	642	-	ENSAPEP00000006858	213 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000004873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000004873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000004873	-	58	34.043	ENSAPEG00000018802	srsf7b	68	33.333
ENSAPEG00000004873	-	59	31.461	ENSAPEG00000013125	-	64	31.461
ENSAPEG00000004873	-	57	45.055	ENSAPEG00000006375	-	69	34.868
ENSAPEG00000004873	-	70	30.476	ENSAPEG00000014876	srsf3b	65	31.461

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000004873	-	70	83.810	ENSG00000154548	SRSF12	54	72.727	Homo_sapiens
ENSAPEG00000004873	-	70	79.048	ENSCHOG00000013911	SRSF12	50	79.048	Choloepus_hoffmanni
ENSAPEG00000004873	-	63	70.833	ENSEBUG00000007679	SRSF12	50	70.833	Eptatretus_burgeri
ENSAPEG00000004873	-	98	78.378	ENSKMAG00000000619	-	52	83.654	Kryptolebias_marmoratus
ENSAPEG00000004873	-	56	67.857	ENSMAUG00000009812	-	100	67.857	Mesocricetus_auratus
ENSAPEG00000004873	-	55	86.747	ENSTBEG00000015120	-	53	86.747	Tupaia_belangeri
ENSAPEG00000004873	-	62	82.979	ENSVPAG00000004175	SRSF12	60	57.407	Vicugna_pacos