EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000005392 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 11214 bases
Position: chr22:22069068-22080281
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000007498	MMR_HSR1	PF01926.23	8.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000007715	-	2632	-	ENSAPEP00000007498	204 (aa)	-	UPI000C303D0B
ENSAPET00000007733	-	543	-	ENSAPEP00000007516	180 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000005392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000005392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000005392	rab18a	79	30.488	ENSAPEG00000018205	si:cabz01085950.1	81	30.488
ENSAPEG00000005392	rab18a	83	38.596	ENSAPEG00000007931	RAB41	79	38.150
ENSAPEG00000005392	rab18a	79	38.554	ENSAPEG00000015652	-	77	38.554
ENSAPEG00000005392	rab18a	95	46.429	ENSAPEG00000001358	rab1ab	96	46.429
ENSAPEG00000005392	rab18a	81	32.530	ENSAPEG00000009546	hrasb	87	32.530
ENSAPEG00000005392	rab18a	85	38.418	ENSAPEG00000023338	si:dkey-13a21.4	78	38.418
ENSAPEG00000005392	rab18a	79	48.780	ENSAPEG00000013255	rab12	67	48.780
ENSAPEG00000005392	rab18a	83	39.766	ENSAPEG00000020892	rab6ba	88	39.766
ENSAPEG00000005392	rab18a	82	35.294	ENSAPEG00000008940	si:ch73-116o1.2	81	35.294
ENSAPEG00000005392	rab18a	80	48.171	ENSAPEG00000014246	rab14	76	48.171
ENSAPEG00000005392	rab18a	93	45.641	ENSAPEG00000022488	-	96	45.641
ENSAPEG00000005392	rab18a	85	33.523	ENSAPEG00000010503	rab34a	66	33.523
ENSAPEG00000005392	rab18a	80	41.212	ENSAPEG00000011209	rab22a	85	41.212
ENSAPEG00000005392	rab18a	95	44.712	ENSAPEG00000010294	rab2a	97	44.712
ENSAPEG00000005392	rab18a	74	34.641	ENSAPEG00000018607	rab34b	55	34.641
ENSAPEG00000005392	rab18a	83	39.535	ENSAPEG00000016172	-	81	39.535
ENSAPEG00000005392	rab18a	79	36.145	ENSAPEG00000014149	rab9b	82	36.145
ENSAPEG00000005392	rab18a	89	31.522	ENSAPEG00000007675	kras	97	31.522
ENSAPEG00000005392	rab18a	74	35.256	ENSAPEG00000011251	rab36	60	35.256
ENSAPEG00000005392	rab18a	52	36.111	ENSAPEG00000001372	RAP2B	84	36.975
ENSAPEG00000005392	rab18a	87	40.782	ENSAPEG00000013376	rab5aa	82	40.782
ENSAPEG00000005392	rab18a	83	39.766	ENSAPEG00000007731	rab6bb	80	39.766
ENSAPEG00000005392	rab18a	73	40.397	ENSAPEG00000005001	rab33ba	65	40.397
ENSAPEG00000005392	rab18a	65	30.075	ENSAPEG00000000995	arl5a	66	30.075
ENSAPEG00000005392	rab18a	84	35.057	ENSAPEG00000003164	rabl2	76	35.057
ENSAPEG00000005392	rab18a	84	38.728	ENSAPEG00000017138	RAB39B	81	38.728
ENSAPEG00000005392	rab18a	84	50.867	ENSAPEG00000012044	rab30	84	50.867
ENSAPEG00000005392	rab18a	79	45.062	ENSAPEG00000000075	rab11a	75	45.062
ENSAPEG00000005392	rab18a	80	46.667	ENSAPEG00000022217	-	76	46.667
ENSAPEG00000005392	rab18a	79	43.558	ENSAPEG00000007912	rab15	76	43.558
ENSAPEG00000005392	rab18a	84	45.087	ENSAPEG00000006500	si:dkey-16l2.16	82	44.571
ENSAPEG00000005392	rab18a	83	39.766	ENSAPEG00000005857	-	80	39.766
ENSAPEG00000005392	rab18a	80	37.725	ENSAPEG00000017200	RAB7A	81	37.725
ENSAPEG00000005392	rab18a	77	31.481	ENSAPEG00000001800	-	85	31.481
ENSAPEG00000005392	rab18a	77	30.864	ENSAPEG00000016212	rhebl1	85	30.864
ENSAPEG00000005392	rab18a	79	31.928	ENSAPEG00000009586	dnajc27	61	31.928
ENSAPEG00000005392	rab18a	73	36.000	ENSAPEG00000008980	rras2	79	36.025
ENSAPEG00000005392	rab18a	80	40.000	ENSAPEG00000007713	rab42a	63	40.000
ENSAPEG00000005392	rab18a	69	41.781	ENSAPEG00000015430	-	78	50.000
ENSAPEG00000005392	rab18a	99	84.804	ENSAPEG00000022923	rab18b	99	84.804
ENSAPEG00000005392	rab18a	84	37.209	ENSAPEG00000019758	rab23	75	37.662
ENSAPEG00000005392	rab18a	79	44.444	ENSAPEG00000022106	rab25b	79	44.444
ENSAPEG00000005392	rab18a	88	43.094	ENSAPEG00000009177	rab11ba	74	45.062
ENSAPEG00000005392	rab18a	88	44.865	ENSAPEG00000004121	-	90	44.865
ENSAPEG00000005392	rab18a	71	42.857	ENSAPEG00000015376	rab33a	66	42.857
ENSAPEG00000005392	rab18a	82	43.023	ENSAPEG00000001822	-	78	43.023
ENSAPEG00000005392	rab18a	94	39.604	ENSAPEG00000022135	rab11al	88	39.604
ENSAPEG00000005392	rab18a	79	43.210	ENSAPEG00000013500	rab25a	76	43.210
ENSAPEG00000005392	rab18a	79	51.852	ENSAPEG00000022171	zgc:171927	77	51.852
ENSAPEG00000005392	rab18a	74	40.397	ENSAPEG00000002915	RAB17	66	40.397
ENSAPEG00000005392	rab18a	80	37.725	ENSAPEG00000000306	RAB7A	81	37.725
ENSAPEG00000005392	rab18a	81	49.701	ENSAPEG00000012105	rab1ba	83	49.701
ENSAPEG00000005392	rab18a	84	48.256	ENSAPEG00000001130	rab35b	99	43.564
ENSAPEG00000005392	rab18a	71	41.497	ENSAPEG00000005176	zgc:101559	63	41.497
ENSAPEG00000005392	rab18a	77	32.099	ENSAPEG00000023408	rheb	85	32.099
ENSAPEG00000005392	rab18a	79	36.747	ENSAPEG00000024142	rab9a	81	36.747
ENSAPEG00000005392	rab18a	79	45.679	ENSAPEG00000016590	rab11bb	74	45.679
ENSAPEG00000005392	rab18a	79	45.062	ENSAPEG00000017868	-	81	42.938
ENSAPEG00000005392	rab18a	73	34.667	ENSAPEG00000002251	rras	82	35.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000005392	rab18a	100	99.510	ENSAPOG00000010760	rab18a	100	99.510	Acanthochromis_polyacanthus
ENSAPEG00000005392	rab18a	100	86.275	ENSACIG00000009617	rab18a	100	86.275	Amphilophus_citrinellus
ENSAPEG00000005392	rab18a	100	100.000	ENSAOCG00000016233	rab18a	100	100.000	Amphiprion_ocellaris
ENSAPEG00000005392	rab18a	100	98.039	ENSATEG00000021911	rab18a	100	98.039	Anabas_testudineus
ENSAPEG00000005392	rab18a	100	87.317	ENSACAG00000005463	-	100	87.317	Anolis_carolinensis
ENSAPEG00000005392	rab18a	100	98.529	ENSACLG00000011484	rab18a	100	98.529	Astatotilapia_calliptera
ENSAPEG00000005392	rab18a	100	85.922	ENSCPBG00000015839	-	100	85.922	Chrysemys_picta_bellii
ENSAPEG00000005392	rab18a	96	70.647	ENSCPBG00000027619	-	98	70.647	Chrysemys_picta_bellii
ENSAPEG00000005392	rab18a	97	75.377	ENSCING00000006838	-	99	75.377	Ciona_intestinalis
ENSAPEG00000005392	rab18a	97	74.372	ENSCSAVG00000010348	-	99	74.372	Ciona_savignyi
ENSAPEG00000005392	rab18a	100	96.569	ENSCSEG00000011816	rab18a	100	96.569	Cynoglossus_semilaevis
ENSAPEG00000005392	rab18a	94	95.833	ENSCVAG00000015451	rab18a	100	95.098	Cyprinodon_variegatus
ENSAPEG00000005392	rab18a	100	82.439	ENSDARG00000055291	rab18a	100	82.439	Danio_rerio
ENSAPEG00000005392	rab18a	100	92.195	ENSELUG00000003805	rab18a	100	92.195	Esox_lucius
ENSAPEG00000005392	rab18a	100	96.569	ENSFHEG00000019455	rab18a	100	96.569	Fundulus_heteroclitus
ENSAPEG00000005392	rab18a	94	96.335	ENSGAFG00000002790	rab18a	100	95.098	Gambusia_affinis
ENSAPEG00000005392	rab18a	100	85.922	ENSGAGG00000015642	-	100	85.922	Gopherus_agassizii
ENSAPEG00000005392	rab18a	100	98.529	ENSHBUG00000001518	rab18a	100	98.529	Haplochromis_burtoni
ENSAPEG00000005392	rab18a	99	98.030	ENSLBEG00000005861	rab18a	95	98.030	Labrus_bergylta
ENSAPEG00000005392	rab18a	93	89.474	ENSLACG00000009310	rab18a	100	87.379	Latimeria_chalumnae
ENSAPEG00000005392	rab18a	100	88.780	ENSLOCG00000007491	rab18a	100	88.780	Lepisosteus_oculatus
ENSAPEG00000005392	rab18a	100	96.078	ENSMAMG00000014320	rab18a	100	96.078	Mastacembelus_armatus
ENSAPEG00000005392	rab18a	100	98.039	ENSMZEG00005017235	rab18a	100	98.039	Maylandia_zebra
ENSAPEG00000005392	rab18a	100	98.529	ENSMALG00000009813	rab18a	100	98.529	Monopterus_albus
ENSAPEG00000005392	rab18a	100	98.529	ENSNBRG00000013507	rab18a	100	98.529	Neolamprologus_brichardi
ENSAPEG00000005392	rab18a	100	96.078	ENSORLG00000004624	rab18a	100	96.078	Oryzias_latipes
ENSAPEG00000005392	rab18a	100	96.569	ENSORLG00020008333	rab18a	100	96.569	Oryzias_latipes_hni
ENSAPEG00000005392	rab18a	94	95.833	ENSORLG00015004739	rab18a	100	95.588	Oryzias_latipes_hsok
ENSAPEG00000005392	rab18a	100	96.078	ENSOMEG00000020605	rab18a	100	96.078	Oryzias_melastigma
ENSAPEG00000005392	rab18a	100	87.805	ENSPKIG00000009825	rab18a	100	87.805	Paramormyrops_kingsleyae
ENSAPEG00000005392	rab18a	100	94.118	ENSPMGG00000020409	-	100	94.118	Periophthalmus_magnuspinnatus
ENSAPEG00000005392	rab18a	94	96.859	ENSPFOG00000007571	rab18a	100	95.588	Poecilia_formosa
ENSAPEG00000005392	rab18a	94	96.859	ENSPLAG00000010104	rab18a	100	95.588	Poecilia_latipinna
ENSAPEG00000005392	rab18a	94	96.859	ENSPMEG00000013085	rab18a	100	95.588	Poecilia_mexicana
ENSAPEG00000005392	rab18a	94	96.859	ENSPREG00000005923	rab18a	83	95.588	Poecilia_reticulata
ENSAPEG00000005392	rab18a	100	98.529	ENSPNYG00000007064	rab18a	100	98.529	Pundamilia_nyererei
ENSAPEG00000005392	rab18a	99	82.090	ENSPNAG00000011548	rab18a	100	82.090	Pygocentrus_nattereri
ENSAPEG00000005392	rab18a	100	90.732	ENSSFOG00015017444	rab18a	84	90.732	Scleropages_formosus
ENSAPEG00000005392	rab18a	94	95.337	ENSSMAG00000002969	rab18a	100	95.122	Scophthalmus_maximus
ENSAPEG00000005392	rab18a	100	97.549	ENSSDUG00000003823	rab18a	100	97.549	Seriola_dumerili
ENSAPEG00000005392	rab18a	100	97.549	ENSSLDG00000006977	rab18a	100	97.549	Seriola_lalandi_dorsalis
ENSAPEG00000005392	rab18a	93	88.889	ENSSPUG00000017677	-	100	86.408	Sphenodon_punctatus
ENSAPEG00000005392	rab18a	100	94.118	ENSTRUG00000004984	rab18a	100	94.118	Takifugu_rubripes
ENSAPEG00000005392	rab18a	100	87.379	ENSUMAG00000015574	-	100	87.379	Ursus_maritimus
ENSAPEG00000005392	rab18a	100	87.864	ENSXETG00000004556	rab18	100	88.350	Xenopus_tropicalis
ENSAPEG00000005392	rab18a	94	96.859	ENSXMAG00000024122	rab18a	100	95.588	Xiphophorus_maculatus