EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000005755 (Gene tree)
Gene ID: -
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 20164 bases
Position: chr17:21115983-21136146
Accession: ZDB-GENE-040709-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008092	CPSF_A	PF03178.15	1.4e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000008328	-	4353	-	ENSAPEP00000008092	1450 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000005755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000005755's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000005755	cpsf1	100	79.574	ENSG00000071894	CPSF1	100	80.556	Homo_sapiens
ENSAPEG00000005755	cpsf1	100	95.544	ENSAPOG00000019621	cpsf1	100	95.544	Acanthochromis_polyacanthus
ENSAPEG00000005755	cpsf1	97	78.424	ENSAMEG00000005557	CPSF1	99	78.038	Ailuropoda_melanoleuca
ENSAPEG00000005755	cpsf1	100	91.655	ENSACIG00000006112	cpsf1	100	91.931	Amphilophus_citrinellus
ENSAPEG00000005755	cpsf1	100	98.552	ENSAOCG00000007120	cpsf1	100	98.552	Amphiprion_ocellaris
ENSAPEG00000005755	cpsf1	100	91.976	ENSATEG00000011097	cpsf1	100	91.976	Anabas_testudineus
ENSAPEG00000005755	cpsf1	93	75.074	ENSACAG00000009655	CPSF1	100	75.074	Anolis_carolinensis
ENSAPEG00000005755	cpsf1	100	79.669	ENSANAG00000036514	CPSF1	100	79.876	Aotus_nancymaae
ENSAPEG00000005755	cpsf1	99	92.224	ENSACLG00000012231	cpsf1	99	92.416	Astatotilapia_calliptera
ENSAPEG00000005755	cpsf1	100	80.647	ENSAMXG00000008485	cpsf1	100	80.579	Astyanax_mexicanus
ENSAPEG00000005755	cpsf1	100	78.393	ENSBTAG00000008355	CPSF1	100	78.970	Bos_taurus
ENSAPEG00000005755	cpsf1	100	32.810	WBGene00022301	cpsf-1	99	41.243	Caenorhabditis_elegans
ENSAPEG00000005755	cpsf1	100	79.945	ENSCJAG00000021421	CPSF1	100	79.807	Callithrix_jacchus
ENSAPEG00000005755	cpsf1	96	80.043	ENSCAFG00000001600	CPSF1	100	79.767	Canis_familiaris
ENSAPEG00000005755	cpsf1	100	79.505	ENSCAFG00020020821	CPSF1	100	79.505	Canis_lupus_dingo
ENSAPEG00000005755	cpsf1	100	75.860	ENSCHIG00000015833	CPSF1	100	75.413	Capra_hircus
ENSAPEG00000005755	cpsf1	100	80.289	ENSTSYG00000028560	CPSF1	100	81.481	Carlito_syrichta
ENSAPEG00000005755	cpsf1	97	79.359	ENSCAPG00000014921	CPSF1	99	79.217	Cavia_aperea
ENSAPEG00000005755	cpsf1	100	78.719	ENSCPOG00000011448	CPSF1	100	78.581	Cavia_porcellus
ENSAPEG00000005755	cpsf1	100	80.083	ENSCCAG00000037658	CPSF1	100	80.734	Cebus_capucinus
ENSAPEG00000005755	cpsf1	100	79.353	ENSCATG00000037234	CPSF1	100	80.556	Cercocebus_atys
ENSAPEG00000005755	cpsf1	100	80.083	ENSCLAG00000012166	CPSF1	100	79.945	Chinchilla_lanigera
ENSAPEG00000005755	cpsf1	100	79.876	ENSCSAG00000008502	CPSF1	100	79.738	Chlorocebus_sabaeus
ENSAPEG00000005755	cpsf1	99	81.250	ENSCPBG00000018910	CPSF1	96	81.458	Chrysemys_picta_bellii
ENSAPEG00000005755	cpsf1	96	48.822	ENSCING00000000514	-	100	48.892	Ciona_intestinalis
ENSAPEG00000005755	cpsf1	99	48.697	ENSCSAVG00000002293	-	99	51.163	Ciona_savignyi
ENSAPEG00000005755	cpsf1	98	76.847	ENSCANG00000032760	CPSF1	100	81.019	Colobus_angolensis_palliatus
ENSAPEG00000005755	cpsf1	100	79.807	ENSCGRG00001016344	Cpsf1	100	79.669	Cricetulus_griseus_chok1gshd
ENSAPEG00000005755	cpsf1	100	78.153	ENSCGRG00000003118	Cpsf1	100	78.015	Cricetulus_griseus_crigri
ENSAPEG00000005755	cpsf1	100	88.621	ENSCSEG00000013464	cpsf1	100	88.759	Cynoglossus_semilaevis
ENSAPEG00000005755	cpsf1	85	87.895	ENSCVAG00000014059	cpsf1	100	81.944	Cyprinodon_variegatus
ENSAPEG00000005755	cpsf1	100	87.835	ENSDARG00000034178	cpsf1	100	87.904	Danio_rerio
ENSAPEG00000005755	cpsf1	57	82.081	ENSDNOG00000043654	CPSF1	94	81.792	Dasypus_novemcinctus
ENSAPEG00000005755	cpsf1	97	79.872	ENSDORG00000006278	Cpsf1	99	79.929	Dipodomys_ordii
ENSAPEG00000005755	cpsf1	100	44.632	FBgn0024698	Cpsf160	100	44.756	Drosophila_melanogaster
ENSAPEG00000005755	cpsf1	80	85.906	ENSETEG00000006022	CPSF1	83	85.906	Echinops_telfairi
ENSAPEG00000005755	cpsf1	100	79.711	ENSEASG00005010774	CPSF1	100	79.711	Equus_asinus_asinus
ENSAPEG00000005755	cpsf1	100	79.574	ENSECAG00000022209	CPSF1	100	79.574	Equus_caballus
ENSAPEG00000005755	cpsf1	100	79.642	ENSEEUG00000000471	CPSF1	100	79.436	Erinaceus_europaeus
ENSAPEG00000005755	cpsf1	100	86.496	ENSELUG00000012271	cpsf1	100	86.553	Esox_lucius
ENSAPEG00000005755	cpsf1	100	80.454	ENSFDAG00000016060	CPSF1	100	80.152	Fukomys_damarensis
ENSAPEG00000005755	cpsf1	100	89.011	ENSFHEG00000016801	cpsf1	100	89.011	Fundulus_heteroclitus
ENSAPEG00000005755	cpsf1	100	87.114	ENSGMOG00000000796	cpsf1	100	87.363	Gadus_morhua
ENSAPEG00000005755	cpsf1	96	91.071	ENSGAFG00000018890	cpsf1	100	91.071	Gambusia_affinis
ENSAPEG00000005755	cpsf1	100	90.959	ENSGACG00000008703	cpsf1	100	91.015	Gasterosteus_aculeatus
ENSAPEG00000005755	cpsf1	100	78.326	ENSGAGG00000004276	CPSF1	98	82.377	Gopherus_agassizii
ENSAPEG00000005755	cpsf1	100	79.531	ENSGGOG00000016185	CPSF1	100	80.556	Gorilla_gorilla
ENSAPEG00000005755	cpsf1	100	94.069	ENSHBUG00000018900	cpsf1	100	94.069	Haplochromis_burtoni
ENSAPEG00000005755	cpsf1	100	80.083	ENSHGLG00000016139	CPSF1	100	79.945	Heterocephalus_glaber_female
ENSAPEG00000005755	cpsf1	100	80.014	ENSHGLG00100009750	CPSF1	100	79.876	Heterocephalus_glaber_male
ENSAPEG00000005755	cpsf1	100	87.940	ENSHCOG00000018509	cpsf1	100	88.008	Hippocampus_comes
ENSAPEG00000005755	cpsf1	100	83.608	ENSIPUG00000011259	cpsf1	100	83.539	Ictalurus_punctatus
ENSAPEG00000005755	cpsf1	97	79.645	ENSSTOG00000009957	CPSF1	99	79.574	Ictidomys_tridecemlineatus
ENSAPEG00000005755	cpsf1	100	80.041	ENSJJAG00000023002	Cpsf1	100	79.738	Jaculus_jaculus
ENSAPEG00000005755	cpsf1	91	94.357	ENSKMAG00000001940	cpsf1	99	94.357	Kryptolebias_marmoratus
ENSAPEG00000005755	cpsf1	100	90.122	ENSLBEG00000003601	cpsf1	100	90.122	Labrus_bergylta
ENSAPEG00000005755	cpsf1	88	79.067	ENSLACG00000000233	CPSF1	92	78.947	Latimeria_chalumnae
ENSAPEG00000005755	cpsf1	100	82.749	ENSLOCG00000008484	cpsf1	100	83.093	Lepisosteus_oculatus
ENSAPEG00000005755	cpsf1	97	79.744	ENSLAFG00000022601	CPSF1	100	79.602	Loxodonta_africana
ENSAPEG00000005755	cpsf1	100	79.394	ENSMFAG00000037013	CPSF1	100	80.556	Macaca_fascicularis
ENSAPEG00000005755	cpsf1	100	79.394	ENSMMUG00000007380	CPSF1	100	80.556	Macaca_mulatta
ENSAPEG00000005755	cpsf1	97	79.943	ENSMNEG00000043564	CPSF1	100	80.556	Macaca_nemestrina
ENSAPEG00000005755	cpsf1	100	79.394	ENSMLEG00000043010	CPSF1	100	80.556	Mandrillus_leucophaeus
ENSAPEG00000005755	cpsf1	100	91.897	ENSMAMG00000003803	cpsf1	100	92.302	Mastacembelus_armatus
ENSAPEG00000005755	cpsf1	100	90.552	ENSMZEG00005001168	cpsf1	100	90.552	Maylandia_zebra
ENSAPEG00000005755	cpsf1	100	79.835	ENSMAUG00000003601	Cpsf1	100	79.531	Mesocricetus_auratus
ENSAPEG00000005755	cpsf1	100	80.041	ENSMICG00000015767	CPSF1	100	79.669	Microcebus_murinus
ENSAPEG00000005755	cpsf1	100	79.766	ENSMOCG00000022758	Cpsf1	100	79.462	Microtus_ochrogaster
ENSAPEG00000005755	cpsf1	100	92.828	ENSMMOG00000021245	cpsf1	100	92.690	Mola_mola
ENSAPEG00000005755	cpsf1	100	79.684	ENSMODG00000010755	CPSF1	100	79.753	Monodelphis_domestica
ENSAPEG00000005755	cpsf1	100	91.143	ENSMALG00000020545	cpsf1	100	91.346	Monopterus_albus
ENSAPEG00000005755	cpsf1	100	80.083	MGP_CAROLIEiJ_G0019936	Cpsf1	100	79.945	Mus_caroli
ENSAPEG00000005755	cpsf1	100	80.152	ENSMUSG00000034022	Cpsf1	100	80.014	Mus_musculus
ENSAPEG00000005755	cpsf1	100	80.014	MGP_PahariEiJ_G0019946	Cpsf1	100	79.876	Mus_pahari
ENSAPEG00000005755	cpsf1	100	80.152	MGP_SPRETEiJ_G0020839	Cpsf1	100	80.014	Mus_spretus
ENSAPEG00000005755	cpsf1	94	80.162	ENSMPUG00000006419	CPSF1	93	80.147	Mustela_putorius_furo
ENSAPEG00000005755	cpsf1	100	79.738	ENSNGAG00000022460	Cpsf1	100	79.600	Nannospalax_galili
ENSAPEG00000005755	cpsf1	100	86.983	ENSNBRG00000000813	cpsf1	100	86.983	Neolamprologus_brichardi
ENSAPEG00000005755	cpsf1	86	69.820	ENSNLEG00000010633	-	100	80.556	Nomascus_leucogenys
ENSAPEG00000005755	cpsf1	82	87.791	ENSMEUG00000014922	CPSF1	85	87.791	Notamacropus_eugenii
ENSAPEG00000005755	cpsf1	60	88.421	ENSOPRG00000004693	-	70	88.421	Ochotona_princeps
ENSAPEG00000005755	cpsf1	100	80.152	ENSODEG00000013995	CPSF1	100	80.014	Octodon_degus
ENSAPEG00000005755	cpsf1	100	94.555	ENSONIG00000007676	cpsf1	100	94.555	Oreochromis_niloticus
ENSAPEG00000005755	cpsf1	59	78.571	ENSOANG00000010716	CPSF1	89	78.571	Ornithorhynchus_anatinus
ENSAPEG00000005755	cpsf1	100	89.310	ENSORLG00000013544	cpsf1	100	89.107	Oryzias_latipes
ENSAPEG00000005755	cpsf1	100	89.310	ENSORLG00020021693	cpsf1	100	89.107	Oryzias_latipes_hni
ENSAPEG00000005755	cpsf1	100	89.545	ENSORLG00015009979	cpsf1	100	89.341	Oryzias_latipes_hsok
ENSAPEG00000005755	cpsf1	100	89.349	ENSOMEG00000011849	cpsf1	100	89.281	Oryzias_melastigma
ENSAPEG00000005755	cpsf1	100	80.179	ENSOGAG00000000315	CPSF1	100	79.876	Otolemur_garnettii
ENSAPEG00000005755	cpsf1	100	79.600	ENSPPAG00000019280	CPSF1	100	81.900	Pan_paniscus
ENSAPEG00000005755	cpsf1	100	79.600	ENSPTRG00000049288	-	100	81.900	Pan_troglodytes
ENSAPEG00000005755	cpsf1	100	78.252	ENSPTRG00000051253	-	100	81.900	Pan_troglodytes
ENSAPEG00000005755	cpsf1	97	79.943	ENSPANG00000015005	CPSF1	100	80.556	Papio_anubis
ENSAPEG00000005755	cpsf1	100	87.603	ENSPKIG00000002582	cpsf1	100	87.603	Paramormyrops_kingsleyae
ENSAPEG00000005755	cpsf1	100	79.822	ENSPCIG00000009035	CPSF1	100	79.890	Phascolarctos_cinereus
ENSAPEG00000005755	cpsf1	100	88.485	ENSPFOG00000012870	cpsf1	100	88.911	Poecilia_formosa
ENSAPEG00000005755	cpsf1	100	88.581	ENSPREG00000016307	cpsf1	100	88.581	Poecilia_reticulata
ENSAPEG00000005755	cpsf1	100	72.658	ENSPPYG00000018973	CPSF1	100	72.590	Pongo_abelii
ENSAPEG00000005755	cpsf1	91	85.511	ENSPCAG00000011541	CPSF1	94	85.511	Procavia_capensis
ENSAPEG00000005755	cpsf1	100	76.568	ENSPCOG00000020001	CPSF1	100	80.556	Propithecus_coquereli
ENSAPEG00000005755	cpsf1	91	88.571	ENSPVAG00000006761	CPSF1	91	88.571	Pteropus_vampyrus
ENSAPEG00000005755	cpsf1	100	92.784	ENSPNYG00000004906	cpsf1	100	92.784	Pundamilia_nyererei
ENSAPEG00000005755	cpsf1	100	82.863	ENSPNAG00000024395	cpsf1	100	82.725	Pygocentrus_nattereri
ENSAPEG00000005755	cpsf1	100	79.807	ENSRNOG00000030705	Cpsf1	100	79.669	Rattus_norvegicus
ENSAPEG00000005755	cpsf1	100	79.462	ENSRBIG00000044907	CPSF1	100	81.019	Rhinopithecus_bieti
ENSAPEG00000005755	cpsf1	100	79.531	ENSRROG00000044861	CPSF1	100	81.019	Rhinopithecus_roxellana
ENSAPEG00000005755	cpsf1	97	80.300	ENSSBOG00000027177	CPSF1	99	80.157	Saimiri_boliviensis_boliviensis
ENSAPEG00000005755	cpsf1	100	79.876	ENSSHAG00000006500	CPSF1	100	79.808	Sarcophilus_harrisii
ENSAPEG00000005755	cpsf1	100	84.880	ENSSFOG00015004606	cpsf1	100	88.090	Scleropages_formosus
ENSAPEG00000005755	cpsf1	100	91.481	ENSSMAG00000020547	cpsf1	100	91.684	Scophthalmus_maximus
ENSAPEG00000005755	cpsf1	100	93.384	ENSSDUG00000001100	cpsf1	100	93.246	Seriola_dumerili
ENSAPEG00000005755	cpsf1	100	93.384	ENSSLDG00000003619	cpsf1	100	93.246	Seriola_lalandi_dorsalis
ENSAPEG00000005755	cpsf1	89	76.362	ENSSARG00000003643	CPSF1	92	76.122	Sorex_araneus
ENSAPEG00000005755	cpsf1	96	82.974	ENSSPUG00000014396	CPSF1	99	82.902	Sphenodon_punctatus
ENSAPEG00000005755	cpsf1	100	94.595	ENSSPAG00000005349	cpsf1	100	94.595	Stegastes_partitus
ENSAPEG00000005755	cpsf1	100	78.611	ENSSSCG00000005906	CPSF1	100	78.611	Sus_scrofa
ENSAPEG00000005755	cpsf1	96	89.433	ENSTRUG00000013134	cpsf1	99	89.153	Takifugu_rubripes
ENSAPEG00000005755	cpsf1	100	90.418	ENSTNIG00000014027	cpsf1	100	90.349	Tetraodon_nigroviridis
ENSAPEG00000005755	cpsf1	77	74.403	ENSTBEG00000001756	CPSF1	91	73.801	Tupaia_belangeri
ENSAPEG00000005755	cpsf1	90	84.138	ENSTTRG00000001937	CPSF1	90	83.966	Tursiops_truncatus
ENSAPEG00000005755	cpsf1	97	79.986	ENSUAMG00000006476	CPSF1	98	79.602	Ursus_americanus
ENSAPEG00000005755	cpsf1	100	89.241	ENSXCOG00000003608	cpsf1	100	89.379	Xiphophorus_couchianus
ENSAPEG00000005755	cpsf1	100	88.414	ENSXMAG00000005798	cpsf1	100	88.552	Xiphophorus_maculatus