EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000005829 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 35177 bases
Position: chr12:36276704-36311880
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008064	CMS1	PF14617.6	2.4e-32	1	1
ENSAPEP00000008064	DEAD	PF00270.29	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000008299	-	2450	-	ENSAPEP00000008064	290 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000005829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000005829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000005829	cmss1	100	52.000	ENSG00000184220	CMSS1	98	62.500	Homo_sapiens
ENSAPEG00000005829	cmss1	90	88.168	ENSAPOG00000010604	cmss1	82	97.537	Acanthochromis_polyacanthus
ENSAPEG00000005829	cmss1	70	64.039	ENSAMEG00000004092	CMSS1	78	64.039	Ailuropoda_melanoleuca
ENSAPEG00000005829	cmss1	91	74.144	ENSACIG00000021854	cmss1	84	74.667	Amphilophus_citrinellus
ENSAPEG00000005829	cmss1	100	99.310	ENSAOCG00000013361	cmss1	100	99.310	Amphiprion_ocellaris
ENSAPEG00000005829	cmss1	100	78.276	ENSATEG00000008209	cmss1	100	77.740	Anabas_testudineus
ENSAPEG00000005829	cmss1	70	62.376	ENSAPLG00000010542	CMSS1	88	62.376	Anas_platyrhynchos
ENSAPEG00000005829	cmss1	96	53.214	ENSACAG00000011065	CMSS1	74	62.376	Anolis_carolinensis
ENSAPEG00000005829	cmss1	100	51.827	ENSANAG00000023565	CMSS1	100	51.724	Aotus_nancymaae
ENSAPEG00000005829	cmss1	100	79.381	ENSACLG00000027294	cmss1	100	80.069	Astatotilapia_calliptera
ENSAPEG00000005829	cmss1	100	60.544	ENSAMXG00000002046	cmss1	100	57.770	Astyanax_mexicanus
ENSAPEG00000005829	cmss1	100	52.414	ENSBTAG00000013663	CMSS1	100	51.724	Bos_taurus
ENSAPEG00000005829	cmss1	100	52.685	ENSCJAG00000000610	CMSS1	100	51.034	Callithrix_jacchus
ENSAPEG00000005829	cmss1	70	64.851	ENSCAFG00000009230	CMSS1	73	64.851	Canis_familiaris
ENSAPEG00000005829	cmss1	65	66.138	ENSCAFG00020024156	-	63	62.871	Canis_lupus_dingo
ENSAPEG00000005829	cmss1	70	64.851	ENSCAFG00020009464	-	74	64.851	Canis_lupus_dingo
ENSAPEG00000005829	cmss1	97	52.500	ENSCHIG00000013003	CMSS1	73	63.366	Capra_hircus
ENSAPEG00000005829	cmss1	70	63.861	ENSTSYG00000009266	CMSS1	78	63.861	Carlito_syrichta
ENSAPEG00000005829	cmss1	65	56.614	ENSCAPG00000013584	CMSS1	88	56.614	Cavia_aperea
ENSAPEG00000005829	cmss1	100	53.872	ENSCPOG00000014680	CMSS1	72	65.347	Cavia_porcellus
ENSAPEG00000005829	cmss1	100	52.492	ENSCCAG00000034685	CMSS1	100	52.759	Cebus_capucinus
ENSAPEG00000005829	cmss1	100	52.333	ENSCATG00000031980	CMSS1	77	64.851	Cercocebus_atys
ENSAPEG00000005829	cmss1	69	63.500	ENSCLAG00000011241	CMSS1	87	63.861	Chinchilla_lanigera
ENSAPEG00000005829	cmss1	70	64.851	ENSCSAG00000006024	CMSS1	82	64.851	Chlorocebus_sabaeus
ENSAPEG00000005829	cmss1	100	40.404	ENSCHOG00000012098	CMSS1	100	38.276	Choloepus_hoffmanni
ENSAPEG00000005829	cmss1	67	41.837	ENSCING00000014848	-	96	43.333	Ciona_intestinalis
ENSAPEG00000005829	cmss1	100	52.000	ENSCANG00000031337	CMSS1	77	64.851	Colobus_angolensis_palliatus
ENSAPEG00000005829	cmss1	100	50.345	ENSCGRG00001014305	Cmss1	100	50.000	Cricetulus_griseus_chok1gshd
ENSAPEG00000005829	cmss1	70	61.881	ENSCGRG00000006722	Cmss1	79	61.881	Cricetulus_griseus_crigri
ENSAPEG00000005829	cmss1	100	73.129	ENSCSEG00000004958	cmss1	100	68.707	Cynoglossus_semilaevis
ENSAPEG00000005829	cmss1	100	78.007	ENSCVAG00000005039	cmss1	100	76.289	Cyprinodon_variegatus
ENSAPEG00000005829	cmss1	100	62.329	ENSDARG00000112579	cmss1	100	62.329	Danio_rerio
ENSAPEG00000005829	cmss1	70	62.871	ENSDNOG00000040418	CMSS1	73	62.871	Dasypus_novemcinctus
ENSAPEG00000005829	cmss1	100	52.901	ENSDORG00000010461	Cmss1	100	52.069	Dipodomys_ordii
ENSAPEG00000005829	cmss1	69	63.000	ENSEASG00005010966	CMSS1	92	63.366	Equus_asinus_asinus
ENSAPEG00000005829	cmss1	69	63.000	ENSECAG00000015662	CMSS1	89	63.366	Equus_caballus
ENSAPEG00000005829	cmss1	69	43.500	ENSEEUG00000007624	-	73	44.059	Erinaceus_europaeus
ENSAPEG00000005829	cmss1	100	61.921	ENSELUG00000019459	cmss1	100	61.056	Esox_lucius
ENSAPEG00000005829	cmss1	100	54.296	ENSFCAG00000044577	CMSS1	100	53.103	Felis_catus
ENSAPEG00000005829	cmss1	70	61.386	ENSFALG00000005816	CMSS1	85	61.386	Ficedula_albicollis
ENSAPEG00000005829	cmss1	70	65.347	ENSFDAG00000012577	CMSS1	89	65.347	Fukomys_damarensis
ENSAPEG00000005829	cmss1	80	82.328	ENSFHEG00000012008	cmss1	94	80.702	Fundulus_heteroclitus
ENSAPEG00000005829	cmss1	99	70.035	ENSGMOG00000016729	cmss1	100	68.641	Gadus_morhua
ENSAPEG00000005829	cmss1	70	63.366	ENSGALG00000015267	CMSS1	77	63.366	Gallus_gallus
ENSAPEG00000005829	cmss1	92	76.030	ENSGAFG00000021217	cmss1	77	85.714	Gambusia_affinis
ENSAPEG00000005829	cmss1	99	72.125	ENSGACG00000002798	cmss1	100	73.519	Gasterosteus_aculeatus
ENSAPEG00000005829	cmss1	70	64.356	ENSGAGG00000019861	CMSS1	79	64.356	Gopherus_agassizii
ENSAPEG00000005829	cmss1	70	64.356	ENSGGOG00000014125	CMSS1	77	64.356	Gorilla_gorilla
ENSAPEG00000005829	cmss1	100	78.351	ENSHBUG00000008431	cmss1	100	74.138	Haplochromis_burtoni
ENSAPEG00000005829	cmss1	69	64.500	ENSHGLG00000019481	CMSS1	82	64.851	Heterocephalus_glaber_female
ENSAPEG00000005829	cmss1	69	64.500	ENSHGLG00100010314	CMSS1	81	64.851	Heterocephalus_glaber_male
ENSAPEG00000005829	cmss1	100	68.581	ENSHCOG00000003222	cmss1	100	64.746	Hippocampus_comes
ENSAPEG00000005829	cmss1	100	62.199	ENSIPUG00000011591	cmss1	100	61.565	Ictalurus_punctatus
ENSAPEG00000005829	cmss1	100	51.839	ENSSTOG00000019366	CMSS1	73	62.871	Ictidomys_tridecemlineatus
ENSAPEG00000005829	cmss1	100	54.138	ENSJJAG00000014894	Cmss1	90	64.851	Jaculus_jaculus
ENSAPEG00000005829	cmss1	92	64.552	ENSKMAG00000002390	cmss1	82	72.906	Kryptolebias_marmoratus
ENSAPEG00000005829	cmss1	91	69.403	ENSLBEG00000006298	cmss1	83	80.882	Labrus_bergylta
ENSAPEG00000005829	cmss1	77	63.229	ENSLACG00000009293	CMSS1	88	65.842	Latimeria_chalumnae
ENSAPEG00000005829	cmss1	100	55.172	ENSLOCG00000009391	cmss1	100	53.793	Lepisosteus_oculatus
ENSAPEG00000005829	cmss1	69	62.000	ENSLAFG00000017509	CMSS1	89	62.376	Loxodonta_africana
ENSAPEG00000005829	cmss1	100	51.667	ENSMFAG00000045006	CMSS1	77	64.356	Macaca_fascicularis
ENSAPEG00000005829	cmss1	100	51.333	ENSMMUG00000002939	CMSS1	85	64.583	Macaca_mulatta
ENSAPEG00000005829	cmss1	100	51.667	ENSMNEG00000031315	CMSS1	77	64.356	Macaca_nemestrina
ENSAPEG00000005829	cmss1	100	51.667	ENSMLEG00000033660	CMSS1	77	64.356	Mandrillus_leucophaeus
ENSAPEG00000005829	cmss1	100	80.690	ENSMAMG00000017176	cmss1	100	80.690	Mastacembelus_armatus
ENSAPEG00000005829	cmss1	100	79.381	ENSMZEG00005021886	cmss1	100	80.069	Maylandia_zebra
ENSAPEG00000005829	cmss1	70	63.366	ENSMGAG00000014360	CMSS1	89	63.366	Meleagris_gallopavo
ENSAPEG00000005829	cmss1	100	38.644	ENSMAUG00000020609	Cmss1	100	37.931	Mesocricetus_auratus
ENSAPEG00000005829	cmss1	100	54.181	ENSMICG00000048977	CMSS1	100	53.448	Microcebus_murinus
ENSAPEG00000005829	cmss1	100	52.041	ENSMOCG00000021937	Cmss1	100	50.345	Microtus_ochrogaster
ENSAPEG00000005829	cmss1	89	74.713	ENSMMOG00000019794	cmss1	84	84.236	Mola_mola
ENSAPEG00000005829	cmss1	91	54.717	ENSMODG00000002275	CMSS1	76	63.366	Monodelphis_domestica
ENSAPEG00000005829	cmss1	100	79.181	ENSMALG00000004250	cmss1	100	76.289	Monopterus_albus
ENSAPEG00000005829	cmss1	100	52.174	MGP_CAROLIEiJ_G0020824	Cmss1	100	52.069	Mus_caroli
ENSAPEG00000005829	cmss1	100	51.505	ENSMUSG00000022748	Cmss1	100	51.034	Mus_musculus
ENSAPEG00000005829	cmss1	100	53.103	MGP_PahariEiJ_G0016524	Cmss1	100	52.069	Mus_pahari
ENSAPEG00000005829	cmss1	100	52.041	MGP_SPRETEiJ_G0021724	Cmss1	100	51.034	Mus_spretus
ENSAPEG00000005829	cmss1	69	63.819	ENSMPUG00000011324	CMSS1	78	64.179	Mustela_putorius_furo
ENSAPEG00000005829	cmss1	69	63.861	ENSMLUG00000001131	CMSS1	78	64.216	Myotis_lucifugus
ENSAPEG00000005829	cmss1	100	52.414	ENSNGAG00000020316	Cmss1	100	52.759	Nannospalax_galili
ENSAPEG00000005829	cmss1	100	79.381	ENSNBRG00000003095	cmss1	100	80.069	Neolamprologus_brichardi
ENSAPEG00000005829	cmss1	100	53.000	ENSNLEG00000034172	CMSS1	77	64.851	Nomascus_leucogenys
ENSAPEG00000005829	cmss1	79	50.877	ENSMEUG00000014505	CMSS1	89	52.970	Notamacropus_eugenii
ENSAPEG00000005829	cmss1	100	53.952	ENSOPRG00000002986	CMSS1	73	63.366	Ochotona_princeps
ENSAPEG00000005829	cmss1	100	52.881	ENSODEG00000005226	-	72	64.851	Octodon_degus
ENSAPEG00000005829	cmss1	100	45.517	ENSODEG00000009446	-	100	44.828	Octodon_degus
ENSAPEG00000005829	cmss1	100	50.345	ENSODEG00000003558	-	75	62.376	Octodon_degus
ENSAPEG00000005829	cmss1	100	47.099	ENSODEG00000001853	-	100	46.416	Octodon_degus
ENSAPEG00000005829	cmss1	90	81.226	ENSONIG00000006678	cmss1	86	84.000	Oreochromis_niloticus
ENSAPEG00000005829	cmss1	76	59.817	ENSOANG00000007529	CMSS1	87	61.386	Ornithorhynchus_anatinus
ENSAPEG00000005829	cmss1	70	63.366	ENSOCUG00000025366	CMSS1	73	63.366	Oryctolagus_cuniculus
ENSAPEG00000005829	cmss1	100	73.103	ENSORLG00000020340	cmss1	100	68.966	Oryzias_latipes
ENSAPEG00000005829	cmss1	90	63.985	ENSORLG00020012235	cmss1	86	74.877	Oryzias_latipes_hni
ENSAPEG00000005829	cmss1	91	65.299	ENSORLG00015015551	cmss1	76	74.384	Oryzias_latipes_hsok
ENSAPEG00000005829	cmss1	100	73.883	ENSOMEG00000012555	cmss1	100	73.540	Oryzias_melastigma
ENSAPEG00000005829	cmss1	70	64.851	ENSOGAG00000002045	CMSS1	89	64.851	Otolemur_garnettii
ENSAPEG00000005829	cmss1	97	52.313	ENSOARG00000017899	CMSS1	70	63.054	Ovis_aries
ENSAPEG00000005829	cmss1	70	64.356	ENSPPAG00000038515	CMSS1	74	64.356	Pan_paniscus
ENSAPEG00000005829	cmss1	100	54.983	ENSPPRG00000016767	CMSS1	72	65.347	Panthera_pardus
ENSAPEG00000005829	cmss1	100	54.639	ENSPTIG00000018274	CMSS1	72	64.851	Panthera_tigris_altaica
ENSAPEG00000005829	cmss1	100	52.333	ENSPTRG00000015157	CMSS1	82	64.356	Pan_troglodytes
ENSAPEG00000005829	cmss1	70	64.851	ENSPANG00000019980	CMSS1	80	64.851	Papio_anubis
ENSAPEG00000005829	cmss1	98	61.324	ENSPKIG00000012609	cmss1	97	61.132	Paramormyrops_kingsleyae
ENSAPEG00000005829	cmss1	70	64.851	ENSPSIG00000003849	CMSS1	88	64.851	Pelodiscus_sinensis
ENSAPEG00000005829	cmss1	70	80.882	ENSPMGG00000010286	cmss1	88	80.882	Periophthalmus_magnuspinnatus
ENSAPEG00000005829	cmss1	100	53.448	ENSPEMG00000016384	Cmss1	100	52.577	Peromyscus_maniculatus_bairdii
ENSAPEG00000005829	cmss1	70	50.980	ENSPMAG00000001146	cmss1	99	51.232	Petromyzon_marinus
ENSAPEG00000005829	cmss1	96	53.957	ENSPCIG00000015656	CMSS1	77	62.871	Phascolarctos_cinereus
ENSAPEG00000005829	cmss1	100	76.632	ENSPFOG00000016849	cmss1	100	74.570	Poecilia_formosa
ENSAPEG00000005829	cmss1	100	76.289	ENSPLAG00000008323	cmss1	100	74.227	Poecilia_latipinna
ENSAPEG00000005829	cmss1	100	79.038	ENSPMEG00000021020	cmss1	100	78.351	Poecilia_mexicana
ENSAPEG00000005829	cmss1	95	78.623	ENSPREG00000007618	cmss1	78	78.947	Poecilia_reticulata
ENSAPEG00000005829	cmss1	100	52.333	ENSPPYG00000013606	CMSS1	100	50.820	Pongo_abelii
ENSAPEG00000005829	cmss1	100	54.296	ENSPCOG00000020035	CMSS1	100	53.103	Propithecus_coquereli
ENSAPEG00000005829	cmss1	100	44.850	ENSPVAG00000017031	CMSS1	100	44.138	Pteropus_vampyrus
ENSAPEG00000005829	cmss1	91	79.245	ENSPNYG00000013428	cmss1	97	80.000	Pundamilia_nyererei
ENSAPEG00000005829	cmss1	100	60.204	ENSPNAG00000007912	cmss1	100	59.524	Pygocentrus_nattereri
ENSAPEG00000005829	cmss1	70	63.861	ENSRNOG00000027888	Cmss1	79	63.861	Rattus_norvegicus
ENSAPEG00000005829	cmss1	100	51.667	ENSRBIG00000037931	CMSS1	77	64.356	Rhinopithecus_bieti
ENSAPEG00000005829	cmss1	100	51.667	ENSRROG00000042910	CMSS1	77	64.356	Rhinopithecus_roxellana
ENSAPEG00000005829	cmss1	83	58.091	ENSSBOG00000030980	CMSS1	77	64.356	Saimiri_boliviensis_boliviensis
ENSAPEG00000005829	cmss1	70	63.861	ENSSHAG00000009321	CMSS1	80	63.861	Sarcophilus_harrisii
ENSAPEG00000005829	cmss1	100	61.724	ENSSFOG00015001509	cmss1	100	61.724	Scleropages_formosus
ENSAPEG00000005829	cmss1	100	75.342	ENSSMAG00000001653	cmss1	100	70.790	Scophthalmus_maximus
ENSAPEG00000005829	cmss1	100	83.904	ENSSDUG00000007719	cmss1	100	80.412	Seriola_dumerili
ENSAPEG00000005829	cmss1	94	77.817	ENSSLDG00000012300	cmss1	71	88.824	Seriola_lalandi_dorsalis
ENSAPEG00000005829	cmss1	100	43.793	ENSSARG00000003584	CMSS1	100	43.448	Sorex_araneus
ENSAPEG00000005829	cmss1	77	60.090	ENSSPUG00000003865	CMSS1	89	61.386	Sphenodon_punctatus
ENSAPEG00000005829	cmss1	94	83.333	ENSSPAG00000019182	cmss1	63	93.103	Stegastes_partitus
ENSAPEG00000005829	cmss1	100	52.921	ENSSSCG00000011970	CMSS1	100	52.069	Sus_scrofa
ENSAPEG00000005829	cmss1	76	61.187	ENSTGUG00000013635	CMSS1	88	62.376	Taeniopygia_guttata
ENSAPEG00000005829	cmss1	100	74.138	ENSTRUG00000015265	cmss1	100	70.345	Takifugu_rubripes
ENSAPEG00000005829	cmss1	70	75.369	ENSTNIG00000002880	cmss1	74	75.369	Tetraodon_nigroviridis
ENSAPEG00000005829	cmss1	100	37.374	ENSTBEG00000016722	CMSS1	72	45.050	Tupaia_belangeri
ENSAPEG00000005829	cmss1	100	52.901	ENSTTRG00000001562	CMSS1	100	50.859	Tursiops_truncatus
ENSAPEG00000005829	cmss1	70	64.851	ENSUAMG00000024209	CMSS1	91	64.851	Ursus_americanus
ENSAPEG00000005829	cmss1	70	64.851	ENSUMAG00000001983	CMSS1	78	64.851	Ursus_maritimus
ENSAPEG00000005829	cmss1	55	63.750	ENSVPAG00000000263	CMSS1	57	63.750	Vicugna_pacos
ENSAPEG00000005829	cmss1	69	64.500	ENSVVUG00000021647	-	82	64.851	Vulpes_vulpes
ENSAPEG00000005829	cmss1	70	63.861	ENSVVUG00000007776	-	80	63.861	Vulpes_vulpes
ENSAPEG00000005829	cmss1	100	53.103	ENSXETG00000011858	cmss1	100	52.069	Xenopus_tropicalis
ENSAPEG00000005829	cmss1	95	74.910	ENSXCOG00000018724	cmss1	70	85.222	Xiphophorus_couchianus
ENSAPEG00000005829	cmss1	92	75.185	ENSXMAG00000011243	cmss1	76	85.222	Xiphophorus_maculatus