EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006069 (Gene tree)
Gene ID: -
Gene Symbol: sbno1
Alias: -
Full Name: strawberry notch homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 23328 bases
Position: chr16:22126392-22149719
Accession: ZDB-GENE-080522-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008513	ResIII	PF04851.15	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000008768	-	1046	-	ENSAPEP00000008525	237 (aa)	-	-
ENSAPET00000008756	-	4233	-	ENSAPEP00000008513	1410 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006069	sbno1	68	64.399	ENSAPEG00000008862	si:ch73-63e15.2	61	64.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006069	sbno1	99	75.193	ENSG00000139697	SBNO1	99	75.053	Homo_sapiens
ENSAPEG00000006069	sbno1	81	98.518	ENSAPOG00000003196	sbno1	98	98.518	Acanthochromis_polyacanthus
ENSAPEG00000006069	sbno1	99	75.263	ENSAMEG00000015151	SBNO1	99	75.070	Ailuropoda_melanoleuca
ENSAPEG00000006069	sbno1	99	89.141	ENSACIG00000008088	sbno1	100	88.786	Amphilophus_citrinellus
ENSAPEG00000006069	sbno1	100	99.929	ENSAOCG00000014859	sbno1	100	99.929	Amphiprion_ocellaris
ENSAPEG00000006069	sbno1	99	93.452	ENSATEG00000006667	sbno1	100	93.025	Anabas_testudineus
ENSAPEG00000006069	sbno1	97	75.771	ENSAPLG00000015674	SBNO1	99	75.901	Anas_platyrhynchos
ENSAPEG00000006069	sbno1	97	75.036	ENSACAG00000015441	SBNO1	88	74.435	Anolis_carolinensis
ENSAPEG00000006069	sbno1	94	83.122	ENSANAG00000029958	-	99	75.000	Aotus_nancymaae
ENSAPEG00000006069	sbno1	99	88.201	ENSACLG00000024913	sbno1	100	87.914	Astatotilapia_calliptera
ENSAPEG00000006069	sbno1	99	81.734	ENSAMXG00000019473	sbno1	100	81.450	Astyanax_mexicanus
ENSAPEG00000006069	sbno1	99	75.439	ENSBTAG00000020505	SBNO1	99	75.386	Bos_taurus
ENSAPEG00000006069	sbno1	99	75.140	ENSCJAG00000016599	SBNO1	99	74.930	Callithrix_jacchus
ENSAPEG00000006069	sbno1	99	75.316	ENSCAFG00000007503	SBNO1	97	84.524	Canis_familiaris
ENSAPEG00000006069	sbno1	94	80.536	ENSCAFG00020015363	SBNO1	99	80.536	Canis_lupus_dingo
ENSAPEG00000006069	sbno1	94	82.531	ENSCHIG00000008382	SBNO1	99	82.531	Capra_hircus
ENSAPEG00000006069	sbno1	99	75.351	ENSTSYG00000012749	SBNO1	99	76.165	Carlito_syrichta
ENSAPEG00000006069	sbno1	89	82.679	ENSCAPG00000000384	SBNO1	99	82.679	Cavia_aperea
ENSAPEG00000006069	sbno1	94	82.679	ENSCPOG00000008109	SBNO1	99	82.679	Cavia_porcellus
ENSAPEG00000006069	sbno1	99	70.877	ENSCCAG00000035316	SBNO1	99	71.250	Cebus_capucinus
ENSAPEG00000006069	sbno1	98	74.435	ENSCATG00000008239	SBNO1	98	82.679	Cercocebus_atys
ENSAPEG00000006069	sbno1	94	82.679	ENSCLAG00000008995	SBNO1	99	82.679	Chinchilla_lanigera
ENSAPEG00000006069	sbno1	82	81.314	ENSCSAG00000002064	SBNO1	99	81.143	Chlorocebus_sabaeus
ENSAPEG00000006069	sbno1	94	72.991	ENSCHOG00000008814	SBNO1	99	68.987	Choloepus_hoffmanni
ENSAPEG00000006069	sbno1	97	75.090	ENSCPBG00000025968	SBNO1	99	74.876	Chrysemys_picta_bellii
ENSAPEG00000006069	sbno1	99	71.719	ENSCANG00000042688	-	99	71.368	Colobus_angolensis_palliatus
ENSAPEG00000006069	sbno1	99	74.596	ENSCGRG00001017470	Sbno1	99	81.283	Cricetulus_griseus_chok1gshd
ENSAPEG00000006069	sbno1	99	74.596	ENSCGRG00000004756	Sbno1	99	81.283	Cricetulus_griseus_crigri
ENSAPEG00000006069	sbno1	99	89.943	ENSCSEG00000011919	sbno1	100	89.943	Cynoglossus_semilaevis
ENSAPEG00000006069	sbno1	99	90.405	ENSCVAG00000007038	sbno1	100	90.192	Cyprinodon_variegatus
ENSAPEG00000006069	sbno1	99	81.037	ENSDARG00000099080	sbno1	100	81.108	Danio_rerio
ENSAPEG00000006069	sbno1	99	77.524	ENSDNOG00000017147	SBNO1	96	77.524	Dasypus_novemcinctus
ENSAPEG00000006069	sbno1	99	69.361	ENSDORG00000015261	Sbno1	83	80.018	Dipodomys_ordii
ENSAPEG00000006069	sbno1	92	71.384	ENSETEG00000005620	SBNO1	93	71.384	Echinops_telfairi
ENSAPEG00000006069	sbno1	74	62.150	ENSEBUG00000013823	sbno1	93	60.784	Eptatretus_burgeri
ENSAPEG00000006069	sbno1	50	73.566	ENSEASG00005012595	-	92	73.913	Equus_asinus_asinus
ENSAPEG00000006069	sbno1	99	75.421	ENSECAG00000006127	SBNO1	99	75.815	Equus_caballus
ENSAPEG00000006069	sbno1	80	76.503	ENSEEUG00000003793	SBNO1	81	76.503	Erinaceus_europaeus
ENSAPEG00000006069	sbno1	99	83.038	ENSELUG00000002886	sbno1	99	82.825	Esox_lucius
ENSAPEG00000006069	sbno1	99	75.421	ENSFCAG00000015331	SBNO1	99	75.228	Felis_catus
ENSAPEG00000006069	sbno1	97	75.627	ENSFALG00000009273	SBNO1	99	75.830	Ficedula_albicollis
ENSAPEG00000006069	sbno1	94	80.616	ENSFDAG00000014232	SBNO1	99	80.072	Fukomys_damarensis
ENSAPEG00000006069	sbno1	99	90.405	ENSFHEG00000007360	sbno1	100	90.192	Fundulus_heteroclitus
ENSAPEG00000006069	sbno1	94	85.146	ENSGMOG00000018229	sbno1	100	84.633	Gadus_morhua
ENSAPEG00000006069	sbno1	87	75.457	ENSGALG00000003392	SBNO1	99	75.958	Gallus_gallus
ENSAPEG00000006069	sbno1	99	90.825	ENSGAFG00000003960	sbno1	100	90.469	Gambusia_affinis
ENSAPEG00000006069	sbno1	93	89.751	ENSGACG00000015633	sbno1	99	89.299	Gasterosteus_aculeatus
ENSAPEG00000006069	sbno1	97	74.746	ENSGAGG00000001065	SBNO1	99	82.716	Gopherus_agassizii
ENSAPEG00000006069	sbno1	94	82.500	ENSGGOG00000015000	SBNO1	99	82.500	Gorilla_gorilla
ENSAPEG00000006069	sbno1	99	81.766	ENSHBUG00000011910	sbno1	100	80.976	Haplochromis_burtoni
ENSAPEG00000006069	sbno1	94	83.666	ENSHGLG00000014165	-	99	83.273	Heterocephalus_glaber_female
ENSAPEG00000006069	sbno1	90	93.097	ENSHCOG00000003246	sbno1	95	93.465	Hippocampus_comes
ENSAPEG00000006069	sbno1	99	81.999	ENSIPUG00000015830	Sbno1	98	82.276	Ictalurus_punctatus
ENSAPEG00000006069	sbno1	94	82.679	ENSSTOG00000023221	SBNO1	99	82.679	Ictidomys_tridecemlineatus
ENSAPEG00000006069	sbno1	99	74.930	ENSJJAG00000001741	Sbno1	99	79.107	Jaculus_jaculus
ENSAPEG00000006069	sbno1	99	92.466	ENSKMAG00000009696	sbno1	100	92.466	Kryptolebias_marmoratus
ENSAPEG00000006069	sbno1	99	90.909	ENSLBEG00000007623	sbno1	100	90.554	Labrus_bergylta
ENSAPEG00000006069	sbno1	99	71.529	ENSLACG00000017227	SBNO1	99	74.561	Latimeria_chalumnae
ENSAPEG00000006069	sbno1	99	80.875	ENSLOCG00000005725	sbno1	97	80.381	Lepisosteus_oculatus
ENSAPEG00000006069	sbno1	99	74.579	ENSLAFG00000002135	SBNO1	99	74.877	Loxodonta_africana
ENSAPEG00000006069	sbno1	99	75.211	ENSMFAG00000031429	SBNO1	99	79.329	Macaca_fascicularis
ENSAPEG00000006069	sbno1	99	75.264	ENSMMUG00000011496	SBNO1	99	79.329	Macaca_mulatta
ENSAPEG00000006069	sbno1	94	82.500	ENSMLEG00000033260	SBNO1	99	82.500	Mandrillus_leucophaeus
ENSAPEG00000006069	sbno1	99	92.674	ENSMAMG00000005473	sbno1	100	92.319	Mastacembelus_armatus
ENSAPEG00000006069	sbno1	97	75.808	ENSMGAG00000003274	SBNO1	99	75.958	Meleagris_gallopavo
ENSAPEG00000006069	sbno1	94	80.399	ENSMICG00000006573	-	99	79.928	Microcebus_murinus
ENSAPEG00000006069	sbno1	99	72.939	ENSMOCG00000009390	Sbno1	99	81.996	Microtus_ochrogaster
ENSAPEG00000006069	sbno1	99	85.735	ENSMMOG00000008691	sbno1	99	86.377	Mola_mola
ENSAPEG00000006069	sbno1	99	75.035	ENSMODG00000012470	SBNO1	98	74.895	Monodelphis_domestica
ENSAPEG00000006069	sbno1	99	92.324	ENSMALG00000001056	sbno1	100	92.324	Monopterus_albus
ENSAPEG00000006069	sbno1	99	75.159	MGP_CAROLIEiJ_G0027749	Sbno1	95	90.789	Mus_caroli
ENSAPEG00000006069	sbno1	99	75.018	ENSMUSG00000038095	Sbno1	94	90.789	Mus_musculus
ENSAPEG00000006069	sbno1	99	75.229	MGP_PahariEiJ_G0024329	Sbno1	95	90.789	Mus_pahari
ENSAPEG00000006069	sbno1	99	75.265	MGP_SPRETEiJ_G0028747	Sbno1	95	90.789	Mus_spretus
ENSAPEG00000006069	sbno1	99	75.492	ENSMPUG00000001658	SBNO1	99	75.298	Mustela_putorius_furo
ENSAPEG00000006069	sbno1	99	74.965	ENSMLUG00000017159	SBNO1	99	74.789	Myotis_lucifugus
ENSAPEG00000006069	sbno1	91	83.689	ENSNGAG00000012620	Sbno1	98	83.689	Nannospalax_galili
ENSAPEG00000006069	sbno1	99	89.073	ENSNBRG00000019189	sbno1	100	87.994	Neolamprologus_brichardi
ENSAPEG00000006069	sbno1	99	72.382	ENSNLEG00000001502	SBNO1	99	74.643	Nomascus_leucogenys
ENSAPEG00000006069	sbno1	61	71.875	ENSMEUG00000008768	-	93	74.843	Notamacropus_eugenii
ENSAPEG00000006069	sbno1	99	74.666	ENSOPRG00000011054	SBNO1	99	74.912	Ochotona_princeps
ENSAPEG00000006069	sbno1	94	82.857	ENSODEG00000009997	SBNO1	99	82.857	Octodon_degus
ENSAPEG00000006069	sbno1	99	92.193	ENSONIG00000015348	sbno1	100	91.483	Oreochromis_niloticus
ENSAPEG00000006069	sbno1	97	74.465	ENSOCUG00000002441	SBNO1	95	74.660	Oryctolagus_cuniculus
ENSAPEG00000006069	sbno1	99	89.915	ENSORLG00000001593	sbno1	100	89.702	Oryzias_latipes
ENSAPEG00000006069	sbno1	99	89.979	ENSORLG00020015216	sbno1	100	89.837	Oryzias_latipes_hni
ENSAPEG00000006069	sbno1	99	90.121	ENSORLG00015002726	sbno1	100	89.979	Oryzias_latipes_hsok
ENSAPEG00000006069	sbno1	98	90.157	ENSOMEG00000019313	sbno1	99	90.086	Oryzias_melastigma
ENSAPEG00000006069	sbno1	99	75.105	ENSOARG00000004404	SBNO1	99	75.263	Ovis_aries
ENSAPEG00000006069	sbno1	99	75.070	ENSPPAG00000024635	SBNO1	99	82.500	Pan_paniscus
ENSAPEG00000006069	sbno1	99	75.421	ENSPPRG00000022092	SBNO1	99	75.228	Panthera_pardus
ENSAPEG00000006069	sbno1	99	75.369	ENSPTIG00000017803	SBNO1	99	75.176	Panthera_tigris_altaica
ENSAPEG00000006069	sbno1	99	75.070	ENSPTRG00000005597	SBNO1	99	82.500	Pan_troglodytes
ENSAPEG00000006069	sbno1	94	82.500	ENSPANG00000011640	SBNO1	99	82.500	Papio_anubis
ENSAPEG00000006069	sbno1	99	80.679	ENSPKIG00000001441	sbno1	100	80.396	Paramormyrops_kingsleyae
ENSAPEG00000006069	sbno1	91	72.015	ENSPSIG00000009256	-	99	72.107	Pelodiscus_sinensis
ENSAPEG00000006069	sbno1	97	74.982	ENSPSIG00000009572	-	99	74.679	Pelodiscus_sinensis
ENSAPEG00000006069	sbno1	94	81.818	ENSPEMG00000016087	Sbno1	99	81.818	Peromyscus_maniculatus_bairdii
ENSAPEG00000006069	sbno1	99	75.000	ENSPCIG00000010985	SBNO1	99	74.912	Phascolarctos_cinereus
ENSAPEG00000006069	sbno1	99	91.536	ENSPFOG00000005069	sbno1	100	91.536	Poecilia_formosa
ENSAPEG00000006069	sbno1	99	91.394	ENSPLAG00000015015	sbno1	100	91.394	Poecilia_latipinna
ENSAPEG00000006069	sbno1	99	91.542	ENSPMEG00000021212	sbno1	100	91.542	Poecilia_mexicana
ENSAPEG00000006069	sbno1	99	90.618	ENSPREG00000017746	sbno1	99	92.755	Poecilia_reticulata
ENSAPEG00000006069	sbno1	99	75.035	ENSPPYG00000005084	SBNO1	99	75.316	Pongo_abelii
ENSAPEG00000006069	sbno1	87	69.385	ENSPCAG00000008634	SBNO1	88	68.901	Procavia_capensis
ENSAPEG00000006069	sbno1	99	75.123	ENSPCOG00000024277	SBNO1	99	82.734	Propithecus_coquereli
ENSAPEG00000006069	sbno1	86	83.499	ENSPVAG00000015304	SBNO1	87	83.499	Pteropus_vampyrus
ENSAPEG00000006069	sbno1	99	91.696	ENSPNYG00000004291	sbno1	100	91.045	Pundamilia_nyererei
ENSAPEG00000006069	sbno1	99	81.831	ENSPNAG00000015622	sbno1	100	81.050	Pygocentrus_nattereri
ENSAPEG00000006069	sbno1	99	74.596	ENSRNOG00000001064	Sbno1	99	82.143	Rattus_norvegicus
ENSAPEG00000006069	sbno1	94	82.500	ENSRROG00000034230	SBNO1	99	82.500	Rhinopithecus_roxellana
ENSAPEG00000006069	sbno1	95	73.071	ENSSBOG00000015422	SBNO1	99	72.595	Saimiri_boliviensis_boliviensis
ENSAPEG00000006069	sbno1	99	81.131	ENSSFOG00015019025	sbno1	100	81.471	Scleropages_formosus
ENSAPEG00000006069	sbno1	99	92.598	ENSSMAG00000013640	sbno1	100	92.171	Scophthalmus_maximus
ENSAPEG00000006069	sbno1	99	94.021	ENSSDUG00000023480	sbno1	100	93.594	Seriola_dumerili
ENSAPEG00000006069	sbno1	99	93.737	ENSSLDG00000007928	sbno1	100	93.310	Seriola_lalandi_dorsalis
ENSAPEG00000006069	sbno1	88	80.323	ENSSARG00000002594	SBNO1	89	80.806	Sorex_araneus
ENSAPEG00000006069	sbno1	97	75.072	ENSSPUG00000012640	SBNO1	99	75.232	Sphenodon_punctatus
ENSAPEG00000006069	sbno1	99	95.949	ENSSPAG00000016244	sbno1	100	95.949	Stegastes_partitus
ENSAPEG00000006069	sbno1	99	75.264	ENSSSCG00000009776	SBNO1	99	75.211	Sus_scrofa
ENSAPEG00000006069	sbno1	97	75.484	ENSTGUG00000005380	SBNO1	99	75.689	Taeniopygia_guttata
ENSAPEG00000006069	sbno1	98	87.216	ENSTRUG00000018490	sbno1	99	87.429	Takifugu_rubripes
ENSAPEG00000006069	sbno1	56	84.577	ENSTNIG00000013506	sbno1	99	84.981	Tetraodon_nigroviridis
ENSAPEG00000006069	sbno1	99	75.421	ENSUAMG00000019671	SBNO1	99	75.228	Ursus_americanus
ENSAPEG00000006069	sbno1	99	75.421	ENSUMAG00000004002	SBNO1	99	75.228	Ursus_maritimus
ENSAPEG00000006069	sbno1	94	71.111	ENSVPAG00000007024	SBNO1	95	71.111	Vicugna_pacos
ENSAPEG00000006069	sbno1	99	75.421	ENSVVUG00000027807	SBNO1	99	75.228	Vulpes_vulpes
ENSAPEG00000006069	sbno1	98	73.343	ENSXETG00000031930	SBNO1	91	80.826	Xenopus_tropicalis
ENSAPEG00000006069	sbno1	86	89.367	ENSXCOG00000011607	sbno1	99	85.064	Xiphophorus_couchianus
ENSAPEG00000006069	sbno1	99	91.187	ENSXMAG00000002140	sbno1	100	90.689	Xiphophorus_maculatus