EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 1249 bases
Position: chr16:4980070-4981318
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008672	LSM	PF01423.22	9.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000008917	-	327	-	ENSAPEP00000008672	108 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006260	-	56	35.000	ENSAPEG00000014961	snrpd1	76	32.184
ENSAPEG00000006260	-	66	33.803	ENSAPEG00000012539	SNRPD1	89	30.769
ENSAPEG00000006260	-	98	100.000	ENSAPEG00000006273	snrpd3l	83	100.000
ENSAPEG00000006260	-	94	32.039	ENSAPEG00000006238	lsm4	72	34.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006260	-	99	100.000	ENSG00000100028	SNRPD3	98	100.000	Homo_sapiens
ENSAPEG00000006260	-	98	100.000	ENSAPOG00000007512	snrpd3l	83	100.000	Acanthochromis_polyacanthus
ENSAPEG00000006260	-	98	100.000	ENSAMEG00000013935	SNRPD3	84	100.000	Ailuropoda_melanoleuca
ENSAPEG00000006260	-	98	100.000	ENSACIG00000008871	snrpd3l	83	100.000	Amphilophus_citrinellus
ENSAPEG00000006260	-	100	100.000	ENSAOCG00000016759	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000006260	-	98	100.000	ENSAOCG00000008497	SNRPD3	83	100.000	Amphiprion_ocellaris
ENSAPEG00000006260	-	98	100.000	ENSAOCG00000016743	snrpd3l	83	100.000	Amphiprion_ocellaris
ENSAPEG00000006260	-	98	100.000	ENSAOCG00000022442	-	83	100.000	Amphiprion_ocellaris
ENSAPEG00000006260	-	98	100.000	ENSATEG00000020556	snrpd3l	76	100.000	Anabas_testudineus
ENSAPEG00000006260	-	98	100.000	ENSAPLG00000008670	SNRPD3	84	100.000	Anas_platyrhynchos
ENSAPEG00000006260	-	99	100.000	ENSANAG00000026106	SNRPD3	90	100.000	Aotus_nancymaae
ENSAPEG00000006260	-	98	100.000	ENSACLG00000021295	snrpd3l	83	100.000	Astatotilapia_calliptera
ENSAPEG00000006260	-	98	98.113	ENSAMXG00000038984	snrpd3l	83	98.113	Astyanax_mexicanus
ENSAPEG00000006260	-	98	100.000	ENSBTAG00000021262	SNRPD3	84	100.000	Bos_taurus
ENSAPEG00000006260	-	85	69.565	WBGene00004914	snr-1	68	69.565	Caenorhabditis_elegans
ENSAPEG00000006260	-	99	100.000	ENSCJAG00000009630	SNRPD3	90	100.000	Callithrix_jacchus
ENSAPEG00000006260	-	98	100.000	ENSCAFG00000013864	-	84	100.000	Canis_familiaris
ENSAPEG00000006260	-	98	99.057	ENSCAFG00000017258	-	84	99.057	Canis_familiaris
ENSAPEG00000006260	-	56	100.000	ENSCAFG00020024699	-	58	100.000	Canis_lupus_dingo
ENSAPEG00000006260	-	98	100.000	ENSCAFG00020007165	-	84	100.000	Canis_lupus_dingo
ENSAPEG00000006260	-	98	100.000	ENSCHIG00000000057	SNRPD3	84	100.000	Capra_hircus
ENSAPEG00000006260	-	98	100.000	ENSTSYG00000007649	SNRPD3	84	100.000	Carlito_syrichta
ENSAPEG00000006260	-	98	100.000	ENSCAPG00000016432	-	84	100.000	Cavia_aperea
ENSAPEG00000006260	-	98	100.000	ENSCPOG00000033102	-	84	100.000	Cavia_porcellus
ENSAPEG00000006260	-	98	100.000	ENSCCAG00000035006	SNRPD3	84	100.000	Cebus_capucinus
ENSAPEG00000006260	-	98	100.000	ENSCATG00000038878	SNRPD3	84	100.000	Cercocebus_atys
ENSAPEG00000006260	-	98	100.000	ENSCLAG00000011403	SNRPD3	84	100.000	Chinchilla_lanigera
ENSAPEG00000006260	-	98	100.000	ENSCSAG00000010694	SNRPD3	84	100.000	Chlorocebus_sabaeus
ENSAPEG00000006260	-	98	100.000	ENSCPBG00000002065	SNRPD3	84	100.000	Chrysemys_picta_bellii
ENSAPEG00000006260	-	98	79.245	ENSCSAVG00000004708	-	79	79.245	Ciona_savignyi
ENSAPEG00000006260	-	98	100.000	ENSCANG00000032106	SNRPD3	84	100.000	Colobus_angolensis_palliatus
ENSAPEG00000006260	-	98	100.000	ENSCGRG00001021990	Snrpd3	84	100.000	Cricetulus_griseus_chok1gshd
ENSAPEG00000006260	-	98	100.000	ENSCGRG00000004280	Snrpd3	84	100.000	Cricetulus_griseus_crigri
ENSAPEG00000006260	-	98	99.057	ENSCVAG00000001276	snrpd3l	83	99.057	Cyprinodon_variegatus
ENSAPEG00000006260	-	98	98.113	ENSDARG00000076283	snrpd3l	83	98.113	Danio_rerio
ENSAPEG00000006260	-	98	96.226	ENSDARG00000013800	snrpd3	83	96.226	Danio_rerio
ENSAPEG00000006260	-	94	79.412	ENSDNOG00000042638	-	84	79.412	Dasypus_novemcinctus
ENSAPEG00000006260	-	98	100.000	ENSDNOG00000047424	-	84	100.000	Dasypus_novemcinctus
ENSAPEG00000006260	-	98	89.908	ENSDNOG00000018004	-	84	89.908	Dasypus_novemcinctus
ENSAPEG00000006260	-	98	85.849	ENSDORG00000027706	-	84	85.849	Dipodomys_ordii
ENSAPEG00000006260	-	98	71.698	ENSDORG00000027169	-	81	71.698	Dipodomys_ordii
ENSAPEG00000006260	-	83	93.333	ENSDORG00000002800	-	82	93.333	Dipodomys_ordii
ENSAPEG00000006260	-	98	83.962	FBgn0023167	SmD3	70	83.962	Drosophila_melanogaster
ENSAPEG00000006260	-	98	100.000	ENSEASG00005000273	SNRPD3	84	100.000	Equus_asinus_asinus
ENSAPEG00000006260	-	98	100.000	ENSECAG00000023316	SNRPD3	84	100.000	Equus_caballus
ENSAPEG00000006260	-	98	100.000	ENSEEUG00000015518	SNRPD3	85	100.000	Erinaceus_europaeus
ENSAPEG00000006260	-	98	97.170	ENSELUG00000001854	snrpd3	83	97.170	Esox_lucius
ENSAPEG00000006260	-	98	100.000	ENSELUG00000010092	snrpd3l	83	100.000	Esox_lucius
ENSAPEG00000006260	-	99	100.000	ENSFCAG00000001512	SNRPD3	89	100.000	Felis_catus
ENSAPEG00000006260	-	98	100.000	ENSFALG00000007303	SNRPD3	84	100.000	Ficedula_albicollis
ENSAPEG00000006260	-	98	100.000	ENSFDAG00000010772	SNRPD3	84	100.000	Fukomys_damarensis
ENSAPEG00000006260	-	98	100.000	ENSFHEG00000010754	snrpd3l	83	100.000	Fundulus_heteroclitus
ENSAPEG00000006260	-	98	99.065	ENSGMOG00000008469	snrpd3l	84	99.065	Gadus_morhua
ENSAPEG00000006260	-	98	100.000	ENSGALG00000006596	SNRPD3	84	100.000	Gallus_gallus
ENSAPEG00000006260	-	100	100.000	ENSGAFG00000006661	snrpd3l	83	100.000	Gambusia_affinis
ENSAPEG00000006260	-	98	99.065	ENSGACG00000017533	snrpd3l	84	99.065	Gasterosteus_aculeatus
ENSAPEG00000006260	-	98	100.000	ENSGAGG00000023325	SNRPD3	84	100.000	Gopherus_agassizii
ENSAPEG00000006260	-	98	100.000	ENSGGOG00000015640	SNRPD3	84	100.000	Gorilla_gorilla
ENSAPEG00000006260	-	98	100.000	ENSHBUG00000001332	snrpd3l	83	100.000	Haplochromis_burtoni
ENSAPEG00000006260	-	98	100.000	ENSHGLG00000016496	SNRPD3	84	100.000	Heterocephalus_glaber_female
ENSAPEG00000006260	-	98	97.170	ENSHGLG00000009844	-	84	97.170	Heterocephalus_glaber_female
ENSAPEG00000006260	-	98	100.000	ENSHGLG00100019304	SNRPD3	84	100.000	Heterocephalus_glaber_male
ENSAPEG00000006260	-	98	97.170	ENSHGLG00100011326	-	84	97.170	Heterocephalus_glaber_male
ENSAPEG00000006260	-	98	100.000	ENSHCOG00000014396	snrpd3l	83	100.000	Hippocampus_comes
ENSAPEG00000006260	-	100	97.222	ENSIPUG00000003083	snrpd3	83	98.113	Ictalurus_punctatus
ENSAPEG00000006260	-	98	100.000	ENSSTOG00000025674	SNRPD3	84	100.000	Ictidomys_tridecemlineatus
ENSAPEG00000006260	-	98	100.000	ENSJJAG00000013303	Snrpd3	84	100.000	Jaculus_jaculus
ENSAPEG00000006260	-	98	100.000	ENSKMAG00000012493	snrpd3l	83	100.000	Kryptolebias_marmoratus
ENSAPEG00000006260	-	98	100.000	ENSLBEG00000003202	snrpd3l	83	100.000	Labrus_bergylta
ENSAPEG00000006260	-	98	99.057	ENSLACG00000015192	SNRPD3	84	99.057	Latimeria_chalumnae
ENSAPEG00000006260	-	98	100.000	ENSLOCG00000006978	snrpd3	89	100.000	Lepisosteus_oculatus
ENSAPEG00000006260	-	98	100.000	ENSLAFG00000028180	SNRPD3	84	100.000	Loxodonta_africana
ENSAPEG00000006260	-	98	100.000	ENSMFAG00000033628	SNRPD3	84	100.000	Macaca_fascicularis
ENSAPEG00000006260	-	98	100.000	ENSMMUG00000000264	SNRPD3	84	100.000	Macaca_mulatta
ENSAPEG00000006260	-	98	100.000	ENSMNEG00000020857	SNRPD3	84	100.000	Macaca_nemestrina
ENSAPEG00000006260	-	99	100.000	ENSMLEG00000037548	SNRPD3	89	100.000	Mandrillus_leucophaeus
ENSAPEG00000006260	-	98	100.000	ENSMZEG00005017664	snrpd3l	83	100.000	Maylandia_zebra
ENSAPEG00000006260	-	98	100.000	ENSMAUG00000021393	Snrpd3	84	100.000	Mesocricetus_auratus
ENSAPEG00000006260	-	98	100.000	ENSMICG00000034782	SNRPD3	84	100.000	Microcebus_murinus
ENSAPEG00000006260	-	98	100.000	ENSMOCG00000009361	Snrpd3	84	100.000	Microtus_ochrogaster
ENSAPEG00000006260	-	100	100.000	ENSMMOG00000020985	snrpd3l	68	100.000	Mola_mola
ENSAPEG00000006260	-	98	100.000	ENSMODG00000004024	SNRPD3	84	100.000	Monodelphis_domestica
ENSAPEG00000006260	-	98	100.000	ENSMALG00000013334	snrpd3l	83	100.000	Monopterus_albus
ENSAPEG00000006260	-	98	100.000	MGP_CAROLIEiJ_G0015441	Snrpd3	84	100.000	Mus_caroli
ENSAPEG00000006260	-	98	100.000	ENSMUSG00000020180	Snrpd3	84	100.000	Mus_musculus
ENSAPEG00000006260	-	98	100.000	MGP_PahariEiJ_G0030857	Snrpd3	84	100.000	Mus_pahari
ENSAPEG00000006260	-	98	100.000	MGP_SPRETEiJ_G0016254	Snrpd3	84	100.000	Mus_spretus
ENSAPEG00000006260	-	98	100.000	ENSMPUG00000002889	SNRPD3	84	100.000	Mustela_putorius_furo
ENSAPEG00000006260	-	98	100.000	ENSMLUG00000009838	SNRPD3	84	100.000	Myotis_lucifugus
ENSAPEG00000006260	-	98	100.000	ENSNGAG00000010328	Snrpd3	84	100.000	Nannospalax_galili
ENSAPEG00000006260	-	98	100.000	ENSNBRG00000020307	snrpd3l	83	100.000	Neolamprologus_brichardi
ENSAPEG00000006260	-	98	100.000	ENSNLEG00000035757	SNRPD3	84	100.000	Nomascus_leucogenys
ENSAPEG00000006260	-	98	100.000	ENSMEUG00000003772	SNRPD3	84	100.000	Notamacropus_eugenii
ENSAPEG00000006260	-	98	100.000	ENSOPRG00000005763	SNRPD3	84	100.000	Ochotona_princeps
ENSAPEG00000006260	-	98	100.000	ENSODEG00000008064	-	84	100.000	Octodon_degus
ENSAPEG00000006260	-	98	96.226	ENSODEG00000020162	-	84	96.226	Octodon_degus
ENSAPEG00000006260	-	98	99.057	ENSODEG00000019354	-	84	99.057	Octodon_degus
ENSAPEG00000006260	-	98	100.000	ENSONIG00000003828	snrpd3l	83	100.000	Oreochromis_niloticus
ENSAPEG00000006260	-	98	100.000	ENSOANG00000002463	SNRPD3	84	100.000	Ornithorhynchus_anatinus
ENSAPEG00000006260	-	98	100.000	ENSOCUG00000004845	SNRPD3	84	100.000	Oryctolagus_cuniculus
ENSAPEG00000006260	-	98	100.000	ENSORLG00000010586	snrpd3l	83	100.000	Oryzias_latipes
ENSAPEG00000006260	-	98	100.000	ENSORLG00020011769	snrpd3l	83	100.000	Oryzias_latipes_hni
ENSAPEG00000006260	-	98	100.000	ENSORLG00015022940	snrpd3l	83	100.000	Oryzias_latipes_hsok
ENSAPEG00000006260	-	100	100.000	ENSOMEG00000022734	snrpd3l	83	100.000	Oryzias_melastigma
ENSAPEG00000006260	-	99	100.000	ENSOGAG00000012708	SNRPD3	84	100.000	Otolemur_garnettii
ENSAPEG00000006260	-	98	100.000	ENSOARG00000013984	SNRPD3	84	100.000	Ovis_aries
ENSAPEG00000006260	-	98	100.000	ENSPPAG00000039191	SNRPD3	84	100.000	Pan_paniscus
ENSAPEG00000006260	-	98	100.000	ENSPPRG00000001470	SNRPD3	84	100.000	Panthera_pardus
ENSAPEG00000006260	-	98	100.000	ENSPTIG00000016610	SNRPD3	84	100.000	Panthera_tigris_altaica
ENSAPEG00000006260	-	98	100.000	ENSPTRG00000014176	SNRPD3	84	100.000	Pan_troglodytes
ENSAPEG00000006260	-	99	100.000	ENSPANG00000009279	SNRPD3	89	100.000	Papio_anubis
ENSAPEG00000006260	-	98	98.113	ENSPKIG00000006412	snrpd3l	83	98.113	Paramormyrops_kingsleyae
ENSAPEG00000006260	-	98	98.113	ENSPSIG00000010022	-	84	98.113	Pelodiscus_sinensis
ENSAPEG00000006260	-	98	100.000	ENSPMGG00000004486	snrpd3l	86	100.000	Periophthalmus_magnuspinnatus
ENSAPEG00000006260	-	98	100.000	ENSPCIG00000010910	SNRPD3	71	100.000	Phascolarctos_cinereus
ENSAPEG00000006260	-	98	100.000	ENSPFOG00000019673	snrpd3l	83	100.000	Poecilia_formosa
ENSAPEG00000006260	-	98	100.000	ENSPLAG00000023249	snrpd3l	83	100.000	Poecilia_latipinna
ENSAPEG00000006260	-	98	100.000	ENSPMEG00000008482	snrpd3l	83	100.000	Poecilia_mexicana
ENSAPEG00000006260	-	100	100.000	ENSPREG00000007532	snrpd3l	89	100.000	Poecilia_reticulata
ENSAPEG00000006260	-	98	100.000	ENSPPYG00000011648	SNRPD3	84	100.000	Pongo_abelii
ENSAPEG00000006260	-	98	100.000	ENSPCAG00000002065	SNRPD3	84	100.000	Procavia_capensis
ENSAPEG00000006260	-	98	100.000	ENSPCOG00000011842	SNRPD3	84	100.000	Propithecus_coquereli
ENSAPEG00000006260	-	98	99.057	ENSPVAG00000011405	SNRPD3	84	99.057	Pteropus_vampyrus
ENSAPEG00000006260	-	98	100.000	ENSPNYG00000013344	snrpd3l	83	100.000	Pundamilia_nyererei
ENSAPEG00000006260	-	98	97.170	ENSPNAG00000008683	snrpd3l	83	97.170	Pygocentrus_nattereri
ENSAPEG00000006260	-	98	96.226	ENSPNAG00000010547	snrpd3	83	96.226	Pygocentrus_nattereri
ENSAPEG00000006260	-	98	100.000	ENSRNOG00000050410	Snrpd3	84	100.000	Rattus_norvegicus
ENSAPEG00000006260	-	98	100.000	ENSRBIG00000029017	SNRPD3	84	100.000	Rhinopithecus_bieti
ENSAPEG00000006260	-	98	100.000	ENSRROG00000031152	SNRPD3	84	100.000	Rhinopithecus_roxellana
ENSAPEG00000006260	-	88	47.368	YLR147C	SMD3	92	47.368	Saccharomyces_cerevisiae
ENSAPEG00000006260	-	98	98.113	ENSSFOG00015007002	snrpd3l	83	98.113	Scleropages_formosus
ENSAPEG00000006260	-	98	97.170	ENSSFOG00015014180	snrpd3l	83	97.170	Scleropages_formosus
ENSAPEG00000006260	-	98	100.000	ENSSMAG00000019307	snrpd3l	83	100.000	Scophthalmus_maximus
ENSAPEG00000006260	-	98	100.000	ENSSDUG00000006870	snrpd3l	83	100.000	Seriola_dumerili
ENSAPEG00000006260	-	98	100.000	ENSSLDG00000022664	snrpd3l	83	100.000	Seriola_lalandi_dorsalis
ENSAPEG00000006260	-	98	100.000	ENSSARG00000002357	SNRPD3	84	100.000	Sorex_araneus
ENSAPEG00000006260	-	98	100.000	ENSSPUG00000014285	SNRPD3	84	100.000	Sphenodon_punctatus
ENSAPEG00000006260	-	98	100.000	ENSSSCG00000010058	SNRPD3	84	100.000	Sus_scrofa
ENSAPEG00000006260	-	98	100.000	ENSTGUG00000010079	SNRPD3	84	100.000	Taeniopygia_guttata
ENSAPEG00000006260	-	100	100.000	ENSTRUG00000023976	snrpd3l	92	100.000	Takifugu_rubripes
ENSAPEG00000006260	-	98	100.000	ENSTNIG00000005323	snrpd3l	83	100.000	Tetraodon_nigroviridis
ENSAPEG00000006260	-	98	100.000	ENSTBEG00000014334	SNRPD3	84	100.000	Tupaia_belangeri
ENSAPEG00000006260	-	98	100.000	ENSTTRG00000006022	SNRPD3	84	100.000	Tursiops_truncatus
ENSAPEG00000006260	-	98	100.000	ENSUAMG00000010767	SNRPD3	84	100.000	Ursus_americanus
ENSAPEG00000006260	-	99	100.000	ENSUMAG00000001670	SNRPD3	84	100.000	Ursus_maritimus
ENSAPEG00000006260	-	98	100.000	ENSVPAG00000000241	SNRPD3	84	100.000	Vicugna_pacos
ENSAPEG00000006260	-	99	100.000	ENSVVUG00000019340	SNRPD3	53	100.000	Vulpes_vulpes
ENSAPEG00000006260	-	77	98.795	ENSXETG00000024918	snrpd3	65	98.795	Xenopus_tropicalis
ENSAPEG00000006260	-	98	100.000	ENSXCOG00000004795	snrpd3l	83	100.000	Xiphophorus_couchianus
ENSAPEG00000006260	-	98	100.000	ENSXMAG00000001133	snrpd3l	83	100.000	Xiphophorus_maculatus