EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006292 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HUPF1|KIAA0221|NORF1|RENT1|pNORF1|smg-2
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 17569 bases
Position: chr2:20112251-20129819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008806	UPF1_Zn_bind	PF09416.10	8.6e-75	1	1
ENSAPEP00000008783	UPF1_Zn_bind	PF09416.10	1e-74	1	1
ENSAPEP00000008806	ResIII	PF04851.15	2.8e-05	1	1
ENSAPEP00000008783	ResIII	PF04851.15	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009054	-	3057	-	ENSAPEP00000008806	1018 (aa)	-	-
ENSAPET00000009031	-	8463	-	ENSAPEP00000008783	1101 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006292	-	100	92.916	ENSAPEG00000016344	upf1	100	93.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006292	-	100	92.596	ENSG00000005007	UPF1	100	92.596	Homo_sapiens
ENSAPEG00000006292	-	100	99.546	ENSAPOG00000010916	-	100	99.546	Acanthochromis_polyacanthus
ENSAPEG00000006292	-	100	93.309	ENSAPOG00000023773	upf1	100	93.309	Acanthochromis_polyacanthus
ENSAPEG00000006292	-	100	92.014	ENSAMEG00000011474	UPF1	100	92.014	Ailuropoda_melanoleuca
ENSAPEG00000006292	-	100	94.742	ENSACIG00000010985	-	100	98.345	Amphilophus_citrinellus
ENSAPEG00000006292	-	100	93.370	ENSACIG00000019949	upf1	100	93.370	Amphilophus_citrinellus
ENSAPEG00000006292	-	100	99.909	ENSAOCG00000006352	-	100	99.909	Amphiprion_ocellaris
ENSAPEG00000006292	-	100	92.916	ENSAOCG00000018519	upf1	100	93.190	Amphiprion_ocellaris
ENSAPEG00000006292	-	100	91.370	ENSATEG00000017867	upf1	100	92.308	Anabas_testudineus
ENSAPEG00000006292	-	100	99.273	ENSATEG00000016606	-	100	99.273	Anabas_testudineus
ENSAPEG00000006292	-	100	91.522	ENSAPLG00000009175	UPF1	100	93.939	Anas_platyrhynchos
ENSAPEG00000006292	-	100	90.077	ENSANAG00000024107	UPF1	95	92.498	Aotus_nancymaae
ENSAPEG00000006292	-	100	93.279	ENSACLG00000007181	upf1	100	93.279	Astatotilapia_calliptera
ENSAPEG00000006292	-	100	98.911	ENSACLG00000022630	-	100	98.911	Astatotilapia_calliptera
ENSAPEG00000006292	-	100	95.014	ENSAMXG00000042187	upf1	100	95.195	Astyanax_mexicanus
ENSAPEG00000006292	-	100	92.028	ENSBTAG00000020922	UPF1	100	92.028	Bos_taurus
ENSAPEG00000006292	-	97	49.853	WBGene00004880	smg-2	99	49.493	Caenorhabditis_elegans
ENSAPEG00000006292	-	100	91.696	ENSCJAG00000019627	UPF1	100	91.696	Callithrix_jacchus
ENSAPEG00000006292	-	100	91.784	ENSCAFG00000014578	UPF1	100	91.784	Canis_familiaris
ENSAPEG00000006292	-	100	92.685	ENSCAFG00020012347	UPF1	100	92.685	Canis_lupus_dingo
ENSAPEG00000006292	-	100	92.934	ENSCHIG00000011018	UPF1	100	92.934	Capra_hircus
ENSAPEG00000006292	-	100	91.233	ENSTSYG00000008877	UPF1	98	93.637	Carlito_syrichta
ENSAPEG00000006292	-	100	91.137	ENSCAPG00000005758	UPF1	95	93.542	Cavia_aperea
ENSAPEG00000006292	-	100	92.722	ENSCPOG00000025463	UPF1	100	92.633	Cavia_porcellus
ENSAPEG00000006292	-	100	92.596	ENSCCAG00000032175	UPF1	100	92.596	Cebus_capucinus
ENSAPEG00000006292	-	100	91.426	ENSCATG00000040306	UPF1	97	94.084	Cercocebus_atys
ENSAPEG00000006292	-	100	91.426	ENSCLAG00000004037	UPF1	99	93.827	Chinchilla_lanigera
ENSAPEG00000006292	-	100	92.596	ENSCSAG00000005276	UPF1	100	92.596	Chlorocebus_sabaeus
ENSAPEG00000006292	-	100	92.735	ENSCPBG00000012513	UPF1	100	92.646	Chrysemys_picta_bellii
ENSAPEG00000006292	-	77	79.625	ENSCING00000021399	-	99	78.546	Ciona_intestinalis
ENSAPEG00000006292	-	99	73.226	ENSCSAVG00000006533	-	99	73.585	Ciona_savignyi
ENSAPEG00000006292	-	100	91.426	ENSCANG00000029819	UPF1	97	93.827	Colobus_angolensis_palliatus
ENSAPEG00000006292	-	100	92.473	ENSCGRG00001021067	Upf1	100	92.473	Cricetulus_griseus_chok1gshd
ENSAPEG00000006292	-	100	90.848	ENSCGRG00000013480	Upf1	98	93.257	Cricetulus_griseus_crigri
ENSAPEG00000006292	-	100	98.093	ENSCSEG00000016159	-	100	98.093	Cynoglossus_semilaevis
ENSAPEG00000006292	-	100	88.214	ENSCSEG00000017239	upf1	100	87.975	Cynoglossus_semilaevis
ENSAPEG00000006292	-	100	98.093	ENSCVAG00000010561	upf1	100	98.093	Cyprinodon_variegatus
ENSAPEG00000006292	-	100	94.379	ENSDARG00000016302	upf1	100	94.651	Danio_rerio
ENSAPEG00000006292	-	100	88.921	ENSDORG00000009984	Upf1	95	91.358	Dipodomys_ordii
ENSAPEG00000006292	-	86	71.714	FBgn0030354	Upf1	81	71.162	Drosophila_melanogaster
ENSAPEG00000006292	-	54	86.777	ENSEBUG00000010069	upf1	96	87.107	Eptatretus_burgeri
ENSAPEG00000006292	-	100	92.844	ENSEASG00005006549	UPF1	100	92.844	Equus_asinus_asinus
ENSAPEG00000006292	-	100	92.844	ENSECAG00000010639	UPF1	100	92.844	Equus_caballus
ENSAPEG00000006292	-	100	95.401	ENSELUG00000012916	-	100	95.401	Esox_lucius
ENSAPEG00000006292	-	100	92.780	ENSELUG00000020917	upf1	100	92.238	Esox_lucius
ENSAPEG00000006292	-	100	91.696	ENSFCAG00000009757	UPF1	100	91.696	Felis_catus
ENSAPEG00000006292	-	100	92.144	ENSFALG00000009312	UPF1	96	94.471	Ficedula_albicollis
ENSAPEG00000006292	-	100	91.329	ENSFDAG00000014816	UPF1	99	93.732	Fukomys_damarensis
ENSAPEG00000006292	-	91	99.093	ENSFHEG00000016276	-	96	99.093	Fundulus_heteroclitus
ENSAPEG00000006292	-	100	89.705	ENSFHEG00000006428	upf1	100	89.267	Fundulus_heteroclitus
ENSAPEG00000006292	-	100	95.148	ENSGMOG00000007541	upf1	100	95.148	Gadus_morhua
ENSAPEG00000006292	-	100	92.672	ENSGALG00000003220	UPF1	100	92.583	Gallus_gallus
ENSAPEG00000006292	-	100	98.093	ENSGAFG00000004831	upf1	100	98.093	Gambusia_affinis
ENSAPEG00000006292	-	63	94.669	ENSGAFG00000015443	-	85	94.669	Gambusia_affinis
ENSAPEG00000006292	-	100	93.243	ENSGAGG00000022217	UPF1	100	93.243	Gopherus_agassizii
ENSAPEG00000006292	-	100	92.405	ENSGGOG00000002608	UPF1	99	94.818	Gorilla_gorilla
ENSAPEG00000006292	-	90	86.207	ENSHBUG00000014694	upf1	100	86.207	Haplochromis_burtoni
ENSAPEG00000006292	-	86	100.000	ENSHBUG00000008939	upf1	95	100.000	Haplochromis_burtoni
ENSAPEG00000006292	-	100	91.431	ENSHGLG00000010900	UPF1	100	91.431	Heterocephalus_glaber_female
ENSAPEG00000006292	-	100	89.595	ENSHGLG00100005904	UPF1	96	92.023	Heterocephalus_glaber_male
ENSAPEG00000006292	-	100	98.004	ENSHCOG00000008918	upf1	100	98.004	Hippocampus_comes
ENSAPEG00000006292	-	100	95.014	ENSIPUG00000005108	UPF1	100	95.195	Ictalurus_punctatus
ENSAPEG00000006292	-	100	92.596	ENSSTOG00000009196	UPF1	100	92.596	Ictidomys_tridecemlineatus
ENSAPEG00000006292	-	100	91.467	ENSJJAG00000023151	Upf1	100	91.467	Jaculus_jaculus
ENSAPEG00000006292	-	100	98.638	ENSKMAG00000004962	upf1	100	98.638	Kryptolebias_marmoratus
ENSAPEG00000006292	-	100	91.846	ENSLBEG00000014862	upf1	100	92.384	Labrus_bergylta
ENSAPEG00000006292	-	100	98.548	ENSLBEG00000027848	-	100	98.548	Labrus_bergylta
ENSAPEG00000006292	-	68	94.684	ENSLACG00000008482	UPF1	100	94.699	Latimeria_chalumnae
ENSAPEG00000006292	-	100	96.094	ENSLOCG00000002072	upf1	100	96.094	Lepisosteus_oculatus
ENSAPEG00000006292	-	100	91.327	ENSLAFG00000014963	UPF1	100	91.327	Loxodonta_africana
ENSAPEG00000006292	-	100	92.349	ENSMFAG00000037748	UPF1	100	92.349	Macaca_fascicularis
ENSAPEG00000006292	-	100	92.103	ENSMMUG00000023286	UPF1	100	92.103	Macaca_mulatta
ENSAPEG00000006292	-	100	92.349	ENSMNEG00000000046	UPF1	100	92.349	Macaca_nemestrina
ENSAPEG00000006292	-	100	91.426	ENSMLEG00000028404	UPF1	99	93.827	Mandrillus_leucophaeus
ENSAPEG00000006292	-	100	98.730	ENSMAMG00000006231	-	100	98.730	Mastacembelus_armatus
ENSAPEG00000006292	-	100	92.218	ENSMAMG00000006229	upf1	100	92.755	Mastacembelus_armatus
ENSAPEG00000006292	-	100	92.273	ENSMZEG00005003489	upf1	100	92.543	Maylandia_zebra
ENSAPEG00000006292	-	100	98.911	ENSMZEG00005016386	-	100	98.911	Maylandia_zebra
ENSAPEG00000006292	-	100	91.049	ENSMGAG00000004745	UPF1	100	93.454	Meleagris_gallopavo
ENSAPEG00000006292	-	100	90.848	ENSMAUG00000011398	Upf1	95	93.257	Mesocricetus_auratus
ENSAPEG00000006292	-	100	92.507	ENSMICG00000001659	UPF1	100	92.507	Microcebus_murinus
ENSAPEG00000006292	-	100	91.571	ENSMOCG00000005699	Upf1	100	91.659	Microtus_ochrogaster
ENSAPEG00000006292	-	100	93.768	ENSMMOG00000007537	-	99	96.459	Mola_mola
ENSAPEG00000006292	-	100	92.461	ENSMMOG00000007881	upf1	100	92.740	Mola_mola
ENSAPEG00000006292	-	100	92.308	ENSMODG00000003689	UPF1	100	91.454	Monodelphis_domestica
ENSAPEG00000006292	-	100	92.461	ENSMALG00000000144	upf1	100	92.391	Monopterus_albus
ENSAPEG00000006292	-	100	97.195	ENSMALG00000018100	-	100	97.195	Monopterus_albus
ENSAPEG00000006292	-	100	92.384	MGP_CAROLIEiJ_G0031142	Upf1	100	92.384	Mus_caroli
ENSAPEG00000006292	-	100	92.384	ENSMUSG00000058301	Upf1	100	92.384	Mus_musculus
ENSAPEG00000006292	-	100	92.384	MGP_PahariEiJ_G0021607	Upf1	100	92.384	Mus_pahari
ENSAPEG00000006292	-	100	92.384	MGP_SPRETEiJ_G0032260	Upf1	100	92.384	Mus_spretus
ENSAPEG00000006292	-	100	92.685	ENSMPUG00000015516	UPF1	100	92.685	Mustela_putorius_furo
ENSAPEG00000006292	-	100	92.308	ENSMLUG00000012122	UPF1	99	92.480	Myotis_lucifugus
ENSAPEG00000006292	-	100	91.150	ENSNGAG00000024107	Upf1	100	91.150	Nannospalax_galili
ENSAPEG00000006292	-	100	91.553	ENSNBRG00000000670	upf1	100	91.553	Neolamprologus_brichardi
ENSAPEG00000006292	-	100	96.184	ENSNBRG00000022069	-	100	97.864	Neolamprologus_brichardi
ENSAPEG00000006292	-	100	85.977	ENSNLEG00000006062	UPF1	99	88.034	Nomascus_leucogenys
ENSAPEG00000006292	-	83	88.672	ENSMEUG00000014146	-	83	88.477	Notamacropus_eugenii
ENSAPEG00000006292	-	100	85.131	ENSOPRG00000014018	UPF1	99	87.716	Ochotona_princeps
ENSAPEG00000006292	-	100	92.806	ENSODEG00000012426	UPF1	100	92.716	Octodon_degus
ENSAPEG00000006292	-	100	92.453	ENSONIG00000010452	upf1	100	92.722	Oreochromis_niloticus
ENSAPEG00000006292	-	100	99.002	ENSONIG00000012729	-	100	99.002	Oreochromis_niloticus
ENSAPEG00000006292	-	100	91.681	ENSOANG00000004568	UPF1	100	90.733	Ornithorhynchus_anatinus
ENSAPEG00000006292	-	100	97.820	ENSORLG00000008453	upf1	100	97.820	Oryzias_latipes
ENSAPEG00000006292	-	100	97.731	ENSORLG00020014758	upf1	100	97.731	Oryzias_latipes_hni
ENSAPEG00000006292	-	100	97.731	ENSORLG00015010165	upf1	100	97.731	Oryzias_latipes_hsok
ENSAPEG00000006292	-	100	98.093	ENSOMEG00000003665	upf1	100	98.093	Oryzias_melastigma
ENSAPEG00000006292	-	100	92.685	ENSOGAG00000012866	UPF1	100	92.685	Otolemur_garnettii
ENSAPEG00000006292	-	96	90.993	ENSOARG00000010739	UPF1	100	90.901	Ovis_aries
ENSAPEG00000006292	-	100	91.426	ENSPPAG00000043884	UPF1	96	93.827	Pan_paniscus
ENSAPEG00000006292	-	100	91.696	ENSPPRG00000023470	UPF1	100	91.696	Panthera_pardus
ENSAPEG00000006292	-	100	90.458	ENSPTIG00000010159	UPF1	99	92.720	Panthera_tigris_altaica
ENSAPEG00000006292	-	100	92.349	ENSPTRG00000010721	UPF1	100	92.349	Pan_troglodytes
ENSAPEG00000006292	-	100	92.349	ENSPANG00000008847	UPF1	100	92.349	Papio_anubis
ENSAPEG00000006292	-	91	95.337	ENSPKIG00000006069	upf1	96	95.892	Paramormyrops_kingsleyae
ENSAPEG00000006292	-	74	89.700	ENSPSIG00000009491	UPF1	100	93.481	Pelodiscus_sinensis
ENSAPEG00000006292	-	100	91.403	ENSPMGG00000017327	upf1	100	91.493	Periophthalmus_magnuspinnatus
ENSAPEG00000006292	-	100	91.571	ENSPEMG00000001085	Upf1	100	91.571	Peromyscus_maniculatus_bairdii
ENSAPEG00000006292	-	100	87.658	ENSPMAG00000001206	upf1	100	87.207	Petromyzon_marinus
ENSAPEG00000006292	-	100	92.768	ENSPCIG00000006156	UPF1	100	92.768	Phascolarctos_cinereus
ENSAPEG00000006292	-	100	91.539	ENSPLAG00000018155	-	100	90.950	Poecilia_latipinna
ENSAPEG00000006292	-	100	98.183	ENSPLAG00000016232	-	100	98.183	Poecilia_latipinna
ENSAPEG00000006292	-	100	92.112	ENSPMEG00000011443	-	100	91.644	Poecilia_mexicana
ENSAPEG00000006292	-	100	98.094	ENSPMEG00000016319	-	100	98.094	Poecilia_mexicana
ENSAPEG00000006292	-	100	97.911	ENSPREG00000011247	-	100	97.911	Poecilia_reticulata
ENSAPEG00000006292	-	100	91.644	ENSPREG00000009940	upf1	100	91.285	Poecilia_reticulata
ENSAPEG00000006292	-	100	86.837	ENSPPYG00000009752	UPF1	100	86.661	Pongo_abelii
ENSAPEG00000006292	-	75	98.653	ENSPCAG00000012962	UPF1	76	98.653	Procavia_capensis
ENSAPEG00000006292	-	100	92.185	ENSPCOG00000023813	UPF1	100	92.185	Propithecus_coquereli
ENSAPEG00000006292	-	68	100.000	ENSPVAG00000003183	UPF1	69	100.000	Pteropus_vampyrus
ENSAPEG00000006292	-	100	98.820	ENSPNYG00000016731	-	100	98.820	Pundamilia_nyererei
ENSAPEG00000006292	-	100	92.273	ENSPNYG00000003694	upf1	100	92.543	Pundamilia_nyererei
ENSAPEG00000006292	-	100	94.560	ENSPNAG00000025614	upf1	100	94.742	Pygocentrus_nattereri
ENSAPEG00000006292	-	100	92.384	ENSRNOG00000020134	Upf1	100	92.384	Rattus_norvegicus
ENSAPEG00000006292	-	100	89.017	ENSRBIG00000013894	UPF1	98	94.645	Rhinopithecus_bieti
ENSAPEG00000006292	-	100	91.426	ENSRROG00000040935	UPF1	98	94.645	Rhinopithecus_roxellana
ENSAPEG00000006292	-	77	56.821	YMR080C	NAM7	82	57.822	Saccharomyces_cerevisiae
ENSAPEG00000006292	-	100	91.426	ENSSBOG00000023632	UPF1	96	94.084	Saimiri_boliviensis_boliviensis
ENSAPEG00000006292	-	100	91.154	ENSSHAG00000010499	UPF1	100	93.649	Sarcophilus_harrisii
ENSAPEG00000006292	-	100	95.735	ENSSFOG00015021095	upf1	100	95.735	Scleropages_formosus
ENSAPEG00000006292	-	100	99.183	ENSSMAG00000021018	-	100	99.183	Scophthalmus_maximus
ENSAPEG00000006292	-	100	91.308	ENSSMAG00000005055	upf1	100	91.935	Scophthalmus_maximus
ENSAPEG00000006292	-	100	99.365	ENSSDUG00000009629	-	100	99.365	Seriola_dumerili
ENSAPEG00000006292	-	100	92.039	ENSSDUG00000013320	upf1	100	92.665	Seriola_dumerili
ENSAPEG00000006292	-	100	92.870	ENSSLDG00000020868	upf1	100	93.231	Seriola_lalandi_dorsalis
ENSAPEG00000006292	-	100	99.365	ENSSLDG00000006878	-	100	99.365	Seriola_lalandi_dorsalis
ENSAPEG00000006292	-	100	93.076	ENSSPUG00000010538	UPF1	100	93.076	Sphenodon_punctatus
ENSAPEG00000006292	-	100	99.183	ENSSPAG00000011521	-	100	99.183	Stegastes_partitus
ENSAPEG00000006292	-	100	91.123	ENSSPAG00000000003	upf1	100	91.008	Stegastes_partitus
ENSAPEG00000006292	-	100	92.844	ENSSSCG00000039301	UPF1	99	94.732	Sus_scrofa
ENSAPEG00000006292	-	82	86.809	ENSTGUG00000001057	UPF1	100	91.124	Taeniopygia_guttata
ENSAPEG00000006292	-	100	97.275	ENSTRUG00000005131	-	100	97.275	Takifugu_rubripes
ENSAPEG00000006292	-	100	92.468	ENSTRUG00000000150	upf1	100	92.287	Takifugu_rubripes
ENSAPEG00000006292	-	100	89.267	ENSTTRG00000011544	UPF1	100	89.177	Tursiops_truncatus
ENSAPEG00000006292	-	100	92.596	ENSUAMG00000007093	UPF1	100	92.596	Ursus_americanus
ENSAPEG00000006292	-	100	92.502	ENSUMAG00000006652	UPF1	99	95.238	Ursus_maritimus
ENSAPEG00000006292	-	100	92.685	ENSVVUG00000007797	UPF1	100	92.685	Vulpes_vulpes
ENSAPEG00000006292	-	100	79.736	ENSXETG00000013602	upf1	100	79.736	Xenopus_tropicalis
ENSAPEG00000006292	-	100	95.229	ENSXCOG00000005764	-	100	98.159	Xiphophorus_couchianus
ENSAPEG00000006292	-	97	91.635	ENSXCOG00000015275	-	96	91.635	Xiphophorus_couchianus
ENSAPEG00000006292	-	100	91.826	ENSXMAG00000001703	-	100	91.826	Xiphophorus_maculatus
ENSAPEG00000006292	-	100	97.913	ENSXMAG00000002540	-	100	97.913	Xiphophorus_maculatus