EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006341 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 51014 bases
Position: chr23:16165248-16216261
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008788	ResIII	PF04851.15	1.5e-06	1	1
ENSAPEP00000008832	ResIII	PF04851.15	1.5e-06	1	1
ENSAPEP00000008888	ResIII	PF04851.15	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009080	-	11113	-	ENSAPEP00000008832	2095 (aa)	-	-
ENSAPET00000009036	-	8920	-	ENSAPEP00000008788	2064 (aa)	-	-
ENSAPET00000009136	-	11736	-	ENSAPEP00000008888	2119 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006341	chd3	85	71.458	ENSAPEG00000020306	-	95	71.025
ENSAPEG00000006341	chd3	74	68.564	ENSAPEG00000001757	chd4a	96	66.345
ENSAPEG00000006341	chd3	83	71.937	ENSAPEG00000005957	-	98	63.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006341	chd3	95	77.728	ENSG00000170004	CHD3	91	80.756	Homo_sapiens
ENSAPEG00000006341	chd3	76	98.947	ENSAPOG00000005614	chd3	94	98.947	Acanthochromis_polyacanthus
ENSAPEG00000006341	chd3	68	76.275	ENSAMEG00000003025	-	68	86.247	Ailuropoda_melanoleuca
ENSAPEG00000006341	chd3	77	97.297	ENSACIG00000019671	chd3	99	97.297	Amphilophus_citrinellus
ENSAPEG00000006341	chd3	100	99.528	ENSAOCG00000023784	chd3	100	99.528	Amphiprion_ocellaris
ENSAPEG00000006341	chd3	100	93.142	ENSATEG00000000848	chd3	100	92.864	Anabas_testudineus
ENSAPEG00000006341	chd3	93	76.355	ENSACAG00000004276	CHD3	94	74.962	Anolis_carolinensis
ENSAPEG00000006341	chd3	95	73.755	ENSANAG00000034323	CHD3	89	80.756	Aotus_nancymaae
ENSAPEG00000006341	chd3	91	96.203	ENSACLG00000009222	chd3	99	91.642	Astatotilapia_calliptera
ENSAPEG00000006341	chd3	96	73.570	ENSBTAG00000014377	CHD3	76	77.567	Bos_taurus
ENSAPEG00000006341	chd3	95	77.664	ENSCJAG00000014766	CHD3	91	80.756	Callithrix_jacchus
ENSAPEG00000006341	chd3	96	73.619	ENSCAFG00000016859	CHD3	75	77.495	Canis_familiaris
ENSAPEG00000006341	chd3	92	79.253	ENSCAFG00020007422	CHD3	96	79.578	Canis_lupus_dingo
ENSAPEG00000006341	chd3	96	73.560	ENSCHIG00000016737	CHD3	75	77.234	Capra_hircus
ENSAPEG00000006341	chd3	95	77.792	ENSTSYG00000035658	CHD3	91	79.522	Carlito_syrichta
ENSAPEG00000006341	chd3	96	70.522	ENSCAPG00000014864	CHD3	89	78.405	Cavia_aperea
ENSAPEG00000006341	chd3	96	72.933	ENSCPOG00000022653	CHD3	74	76.712	Cavia_porcellus
ENSAPEG00000006341	chd3	95	77.664	ENSCCAG00000034792	CHD3	88	80.756	Cebus_capucinus
ENSAPEG00000006341	chd3	95	77.728	ENSCATG00000041717	CHD3	91	80.756	Cercocebus_atys
ENSAPEG00000006341	chd3	96	76.497	ENSCLAG00000010523	CHD3	92	80.069	Chinchilla_lanigera
ENSAPEG00000006341	chd3	96	73.495	ENSCSAG00000011122	CHD3	76	77.763	Chlorocebus_sabaeus
ENSAPEG00000006341	chd3	79	93.151	ENSCPBG00000011966	CHD3	95	84.456	Chrysemys_picta_bellii
ENSAPEG00000006341	chd3	95	77.728	ENSCANG00000037641	CHD3	91	80.756	Colobus_angolensis_palliatus
ENSAPEG00000006341	chd3	96	75.471	ENSCGRG00001011306	Chd3	92	79.863	Cricetulus_griseus_chok1gshd
ENSAPEG00000006341	chd3	92	69.300	ENSCGRG00000007878	Chd3	93	76.782	Cricetulus_griseus_crigri
ENSAPEG00000006341	chd3	91	88.107	ENSCSEG00000004489	chd3	100	91.270	Cynoglossus_semilaevis
ENSAPEG00000006341	chd3	84	93.976	ENSCVAG00000007293	chd3	95	94.694	Cyprinodon_variegatus
ENSAPEG00000006341	chd3	93	85.010	ENSDARG00000021405	chd3	97	90.446	Danio_rerio
ENSAPEG00000006341	chd3	96	73.484	ENSDORG00000010713	Chd3	92	80.069	Dipodomys_ordii
ENSAPEG00000006341	chd3	95	69.296	ENSETEG00000017733	CHD3	90	77.409	Echinops_telfairi
ENSAPEG00000006341	chd3	75	68.350	ENSEBUG00000008310	chd3	99	67.338	Eptatretus_burgeri
ENSAPEG00000006341	chd3	90	74.882	ENSEASG00005019360	CHD3	76	79.762	Equus_asinus_asinus
ENSAPEG00000006341	chd3	90	74.934	ENSECAG00000010051	CHD3	76	79.762	Equus_caballus
ENSAPEG00000006341	chd3	82	91.667	ENSEEUG00000015205	CHD3	84	91.667	Erinaceus_europaeus
ENSAPEG00000006341	chd3	75	97.279	ENSELUG00000019499	chd3	99	97.279	Esox_lucius
ENSAPEG00000006341	chd3	96	73.547	ENSFCAG00000009629	CHD3	73	77.756	Felis_catus
ENSAPEG00000006341	chd3	92	74.987	ENSFDAG00000008220	CHD3	72	79.292	Fukomys_damarensis
ENSAPEG00000006341	chd3	85	86.869	ENSGMOG00000013599	chd3	91	87.273	Gadus_morhua
ENSAPEG00000006341	chd3	56	86.387	ENSGAFG00000004055	chd3	99	89.897	Gambusia_affinis
ENSAPEG00000006341	chd3	96	83.457	ENSGACG00000019275	chd3	99	82.570	Gasterosteus_aculeatus
ENSAPEG00000006341	chd3	67	82.492	ENSGAGG00000013164	CHD3	97	77.752	Gopherus_agassizii
ENSAPEG00000006341	chd3	95	77.664	ENSGGOG00000013496	CHD3	91	80.756	Gorilla_gorilla
ENSAPEG00000006341	chd3	96	76.656	ENSHGLG00000012017	CHD3	88	80.412	Heterocephalus_glaber_female
ENSAPEG00000006341	chd3	86	79.239	ENSHGLG00100013902	CHD3	93	85.000	Heterocephalus_glaber_male
ENSAPEG00000006341	chd3	97	86.424	ENSHCOG00000010170	chd3	99	86.547	Hippocampus_comes
ENSAPEG00000006341	chd3	88	85.854	ENSIPUG00000003271	chd3	93	86.719	Ictalurus_punctatus
ENSAPEG00000006341	chd3	96	73.448	ENSSTOG00000025907	CHD3	95	77.299	Ictidomys_tridecemlineatus
ENSAPEG00000006341	chd3	96	76.522	ENSJJAG00000017633	Chd3	92	80.756	Jaculus_jaculus
ENSAPEG00000006341	chd3	91	93.333	ENSKMAG00000019292	chd3	96	98.500	Kryptolebias_marmoratus
ENSAPEG00000006341	chd3	89	94.841	ENSLBEG00000028485	chd3	93	95.935	Labrus_bergylta
ENSAPEG00000006341	chd3	94	71.067	ENSLACG00000008031	CHD3	92	77.815	Latimeria_chalumnae
ENSAPEG00000006341	chd3	100	80.086	ENSLOCG00000013965	chd3	78	83.520	Lepisosteus_oculatus
ENSAPEG00000006341	chd3	93	72.690	ENSLAFG00000000572	CHD3	89	82.435	Loxodonta_africana
ENSAPEG00000006341	chd3	95	77.728	ENSMFAG00000020113	CHD3	91	80.756	Macaca_fascicularis
ENSAPEG00000006341	chd3	96	72.118	ENSMMUG00000022221	CHD3	89	79.070	Macaca_mulatta
ENSAPEG00000006341	chd3	95	77.728	ENSMNEG00000001728	CHD3	91	80.756	Macaca_nemestrina
ENSAPEG00000006341	chd3	95	77.728	ENSMLEG00000032249	CHD3	91	80.756	Mandrillus_leucophaeus
ENSAPEG00000006341	chd3	77	96.842	ENSMAMG00000000564	chd3	95	96.842	Mastacembelus_armatus
ENSAPEG00000006341	chd3	96	75.376	ENSMAUG00000013873	Chd3	89	79.863	Mesocricetus_auratus
ENSAPEG00000006341	chd3	96	73.984	ENSMICG00000008741	CHD3	88	80.069	Microcebus_murinus
ENSAPEG00000006341	chd3	96	72.821	ENSMOCG00000004848	Chd3	93	79.522	Microtus_ochrogaster
ENSAPEG00000006341	chd3	93	85.522	ENSMMOG00000012699	chd3	98	86.192	Mola_mola
ENSAPEG00000006341	chd3	90	78.929	ENSMODG00000007509	CHD3	96	80.141	Monodelphis_domestica
ENSAPEG00000006341	chd3	96	76.337	MGP_CAROLIEiJ_G0016564	Chd3	95	79.863	Mus_caroli
ENSAPEG00000006341	chd3	96	76.098	ENSMUSG00000018474	Chd3	95	79.863	Mus_musculus
ENSAPEG00000006341	chd3	95	76.952	MGP_PahariEiJ_G0017695	Chd3	95	79.863	Mus_pahari
ENSAPEG00000006341	chd3	96	76.023	MGP_SPRETEiJ_G0017400	Chd3	95	79.863	Mus_spretus
ENSAPEG00000006341	chd3	85	75.829	ENSMPUG00000008861	CHD3	74	81.496	Mustela_putorius_furo
ENSAPEG00000006341	chd3	96	73.153	ENSMLUG00000014643	-	75	77.445	Myotis_lucifugus
ENSAPEG00000006341	chd3	96	73.186	ENSNGAG00000000773	Chd3	74	77.299	Nannospalax_galili
ENSAPEG00000006341	chd3	84	89.204	ENSNBRG00000000636	chd3	98	89.946	Neolamprologus_brichardi
ENSAPEG00000006341	chd3	86	86.122	ENSNLEG00000009770	CHD3	91	83.071	Nomascus_leucogenys
ENSAPEG00000006341	chd3	78	80.268	ENSMEUG00000005852	CHD3	84	80.405	Notamacropus_eugenii
ENSAPEG00000006341	chd3	92	74.497	ENSOPRG00000011069	CHD3	77	78.649	Ochotona_princeps
ENSAPEG00000006341	chd3	96	73.560	ENSODEG00000017785	CHD3	75	77.169	Octodon_degus
ENSAPEG00000006341	chd3	94	91.094	ENSONIG00000009292	chd3	99	90.367	Oreochromis_niloticus
ENSAPEG00000006341	chd3	96	69.877	ENSOCUG00000029299	CHD3	76	75.553	Oryctolagus_cuniculus
ENSAPEG00000006341	chd3	79	89.104	ENSORLG00000007107	chd3	91	89.382	Oryzias_latipes
ENSAPEG00000006341	chd3	55	87.556	ENSORLG00020008387	chd3	95	88.711	Oryzias_latipes_hni
ENSAPEG00000006341	chd3	79	93.853	ENSOMEG00000013691	chd3	99	87.493	Oryzias_melastigma
ENSAPEG00000006341	chd3	96	73.596	ENSOGAG00000003216	CHD3	76	77.756	Otolemur_garnettii
ENSAPEG00000006341	chd3	96	72.493	ENSOARG00000017855	CHD3	74	76.948	Ovis_aries
ENSAPEG00000006341	chd3	96	71.928	ENSPPAG00000032886	CHD3	91	78.788	Pan_paniscus
ENSAPEG00000006341	chd3	96	76.788	ENSPPRG00000000626	CHD3	91	80.069	Panthera_pardus
ENSAPEG00000006341	chd3	95	77.728	ENSPTRG00000008714	CHD3	91	80.756	Pan_troglodytes
ENSAPEG00000006341	chd3	95	75.802	ENSPANG00000023938	CHD3	88	80.756	Papio_anubis
ENSAPEG00000006341	chd3	100	83.133	ENSPKIG00000006305	chd3	95	89.720	Paramormyrops_kingsleyae
ENSAPEG00000006341	chd3	53	81.025	ENSPSIG00000010177	CHD3	97	81.176	Pelodiscus_sinensis
ENSAPEG00000006341	chd3	96	72.920	ENSPEMG00000014262	Chd3	75	77.053	Peromyscus_maniculatus_bairdii
ENSAPEG00000006341	chd3	89	82.489	ENSPCIG00000005442	CHD3	90	90.955	Phascolarctos_cinereus
ENSAPEG00000006341	chd3	100	92.088	ENSPFOG00000012464	chd3	100	91.386	Poecilia_formosa
ENSAPEG00000006341	chd3	86	94.422	ENSPLAG00000002887	chd3	97	94.378	Poecilia_latipinna
ENSAPEG00000006341	chd3	53	90.636	ENSPMEG00000016725	chd3	95	88.007	Poecilia_mexicana
ENSAPEG00000006341	chd3	89	97.101	ENSPREG00000011044	chd3	97	94.845	Poecilia_reticulata
ENSAPEG00000006341	chd3	95	71.550	ENSPPYG00000007940	CHD3	76	74.511	Pongo_abelii
ENSAPEG00000006341	chd3	93	77.179	ENSPCAG00000004350	CHD3	72	86.019	Procavia_capensis
ENSAPEG00000006341	chd3	95	77.599	ENSPCOG00000020952	CHD3	89	80.069	Propithecus_coquereli
ENSAPEG00000006341	chd3	79	75.102	ENSPVAG00000016344	CHD3	63	79.461	Pteropus_vampyrus
ENSAPEG00000006341	chd3	100	84.945	ENSPNAG00000020393	chd3	98	92.933	Pygocentrus_nattereri
ENSAPEG00000006341	chd3	96	71.484	ENSRBIG00000033562	CHD3	91	80.756	Rhinopithecus_bieti
ENSAPEG00000006341	chd3	95	77.728	ENSRROG00000029554	CHD3	91	80.756	Rhinopithecus_roxellana
ENSAPEG00000006341	chd3	95	77.728	ENSSBOG00000020719	CHD3	91	80.756	Saimiri_boliviensis_boliviensis
ENSAPEG00000006341	chd3	96	72.741	ENSSHAG00000014412	CHD3	93	80.137	Sarcophilus_harrisii
ENSAPEG00000006341	chd3	85	79.848	ENSSFOG00015023123	chd3	92	88.552	Scleropages_formosus
ENSAPEG00000006341	chd3	90	93.433	ENSSMAG00000006451	chd3	100	92.846	Scophthalmus_maximus
ENSAPEG00000006341	chd3	53	90.826	ENSSDUG00000005792	chd3	96	90.826	Seriola_dumerili
ENSAPEG00000006341	chd3	99	97.633	ENSSPAG00000013694	chd3	99	98.936	Stegastes_partitus
ENSAPEG00000006341	chd3	96	75.369	ENSSSCG00000021363	CHD3	92	77.727	Sus_scrofa
ENSAPEG00000006341	chd3	79	85.714	ENSTRUG00000014990	chd3	92	88.053	Takifugu_rubripes
ENSAPEG00000006341	chd3	95	85.968	ENSTNIG00000012998	chd3	99	91.046	Tetraodon_nigroviridis
ENSAPEG00000006341	chd3	58	91.667	ENSTBEG00000011454	-	69	91.667	Tupaia_belangeri
ENSAPEG00000006341	chd3	93	76.966	ENSTTRG00000010295	CHD3	73	82.821	Tursiops_truncatus
ENSAPEG00000006341	chd3	82	83.830	ENSUAMG00000005475	CHD3	95	83.830	Ursus_americanus
ENSAPEG00000006341	chd3	93	77.049	ENSVVUG00000028011	CHD3	86	84.016	Vulpes_vulpes
ENSAPEG00000006341	chd3	96	67.932	ENSXETG00000012991	chd3	70	72.161	Xenopus_tropicalis
ENSAPEG00000006341	chd3	58	92.076	ENSXCOG00000000809	chd3	99	92.076	Xiphophorus_couchianus
ENSAPEG00000006341	chd3	76	95.109	ENSXMAG00000016035	chd3	99	95.109	Xiphophorus_maculatus