EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006355 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 12369 bases
Position: chr5:31523613-31535981
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000008807	HABP4_PAI-RBP1	PF04774.15	6.9e-25	1	1
ENSAPEP00000008796	HABP4_PAI-RBP1	PF04774.15	7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009044	-	1110	-	ENSAPEP00000008796	369 (aa)	-	-
ENSAPET00000009055	-	1162	-	ENSAPEP00000008807	366 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006355	-	56	39.407	ENSAPEG00000002960	serbp1b	91	36.930
ENSAPEG00000006355	-	99	34.804	ENSAPEG00000009604	serbp1a	100	37.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006355	-	100	89.071	ENSAPOG00000018926	-	100	90.984	Acanthochromis_polyacanthus
ENSAPEG00000006355	-	100	99.185	ENSAOCG00000011621	-	100	99.185	Amphiprion_ocellaris
ENSAPEG00000006355	-	99	45.013	ENSAMXG00000000297	-	96	45.052	Astyanax_mexicanus
ENSAPEG00000006355	-	100	63.926	ENSCSEG00000017753	-	100	62.234	Cynoglossus_semilaevis
ENSAPEG00000006355	-	97	53.846	ENSGAFG00000012163	-	99	53.543	Gambusia_affinis
ENSAPEG00000006355	-	100	73.098	ENSMAMG00000020735	-	98	73.784	Mastacembelus_armatus
ENSAPEG00000006355	-	99	34.783	ENSMODG00000000514	-	52	40.870	Monodelphis_domestica
ENSAPEG00000006355	-	99	48.219	ENSPMGG00000017136	-	99	46.575	Periophthalmus_magnuspinnatus
ENSAPEG00000006355	-	100	71.925	ENSSMAG00000003212	-	100	71.925	Scophthalmus_maximus
ENSAPEG00000006355	-	100	76.253	ENSSDUG00000002625	-	100	75.726	Seriola_dumerili
ENSAPEG00000006355	-	72	77.358	ENSSLDG00000019167	-	96	77.470	Seriola_lalandi_dorsalis
ENSAPEG00000006355	-	100	80.541	ENSSPAG00000009182	-	100	80.811	Stegastes_partitus
ENSAPEG00000006355	-	100	63.144	ENSTRUG00000015277	IHABP	100	62.331	Takifugu_rubripes
ENSAPEG00000006355	-	99	36.029	ENSTTRG00000005786	-	96	35.154	Tursiops_truncatus