EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006533 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 7039 bases
Position: chr3:35348621-35355659
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000009151	MMR_HSR1	PF01926.23	2.9e-09	1	1
ENSAPEP00000009141	MMR_HSR1	PF01926.23	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009392	SRL (1 of many)-201	1356	-	ENSAPEP00000009141	451 (aa)	-	-
ENSAPET00000009402	SRL (1 of many)-202	1344	-	ENSAPEP00000009151	447 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006533	SRL	88	31.785	ENSAPEG00000013326	ehd4	64	33.702
ENSAPEG00000006533	SRL	77	33.815	ENSAPEG00000018380	ehd3	67	33.425
ENSAPEG00000006533	SRL	84	34.293	ENSAPEG00000013956	ehd2b	65	34.530
ENSAPEG00000006533	SRL	100	72.609	ENSAPEG00000006911	srl	97	71.460
ENSAPEG00000006533	SRL	93	31.148	ENSAPEG00000019382	-	68	32.181
ENSAPEG00000006533	SRL	82	31.436	ENSAPEG00000010363	ehd1a	67	31.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006533	SRL	99	70.110	ENSG00000185739	SRL	99	71.628	Homo_sapiens
ENSAPEG00000006533	SRL	100	72.391	ENSAPOG00000018093	srl	99	73.696	Acanthochromis_polyacanthus
ENSAPEG00000006533	SRL	98	91.778	ENSAPOG00000012432	SRL	100	91.629	Acanthochromis_polyacanthus
ENSAPEG00000006533	SRL	99	68.365	ENSAMEG00000010862	SRL	52	70.524	Ailuropoda_melanoleuca
ENSAPEG00000006533	SRL	96	75.000	ENSACIG00000015799	srl	98	74.492	Amphilophus_citrinellus
ENSAPEG00000006533	SRL	98	83.964	ENSACIG00000015419	SRL	99	84.580	Amphilophus_citrinellus
ENSAPEG00000006533	SRL	100	95.690	ENSAOCG00000017049	SRL	100	95.690	Amphiprion_ocellaris
ENSAPEG00000006533	SRL	94	74.483	ENSAOCG00000007574	srl	100	73.963	Amphiprion_ocellaris
ENSAPEG00000006533	SRL	100	73.043	ENSATEG00000024315	srl	97	72.549	Anabas_testudineus
ENSAPEG00000006533	SRL	99	84.188	ENSATEG00000009643	SRL	53	84.165	Anabas_testudineus
ENSAPEG00000006533	SRL	96	70.705	ENSACAG00000016380	SRL	86	68.432	Anolis_carolinensis
ENSAPEG00000006533	SRL	99	82.692	ENSACLG00000024674	SRL	58	81.410	Astatotilapia_calliptera
ENSAPEG00000006533	SRL	100	73.043	ENSACLG00000027685	srl	99	73.230	Astatotilapia_calliptera
ENSAPEG00000006533	SRL	96	75.339	ENSAMXG00000018789	srl	86	74.150	Astyanax_mexicanus
ENSAPEG00000006533	SRL	90	80.048	ENSAMXG00000038693	SRL	100	75.276	Astyanax_mexicanus
ENSAPEG00000006533	SRL	96	71.429	ENSBTAG00000001078	SRL	56	71.882	Bos_taurus
ENSAPEG00000006533	SRL	96	71.946	ENSCJAG00000019750	SRL	96	70.549	Callithrix_jacchus
ENSAPEG00000006533	SRL	99	70.485	ENSCAFG00000019233	SRL	84	70.485	Canis_familiaris
ENSAPEG00000006533	SRL	96	71.946	ENSCAFG00020025024	SRL	54	72.398	Canis_lupus_dingo
ENSAPEG00000006533	SRL	96	71.429	ENSCHIG00000017927	SRL	55	71.882	Capra_hircus
ENSAPEG00000006533	SRL	99	70.989	ENSTSYG00000007919	SRL	99	72.326	Carlito_syrichta
ENSAPEG00000006533	SRL	99	70.769	ENSCPOG00000012643	SRL	96	70.989	Cavia_porcellus
ENSAPEG00000006533	SRL	96	67.873	ENSCCAG00000032646	SRL	100	73.351	Cebus_capucinus
ENSAPEG00000006533	SRL	99	70.110	ENSCATG00000032227	-	96	70.110	Cercocebus_atys
ENSAPEG00000006533	SRL	99	70.769	ENSCLAG00000016242	SRL	96	70.989	Chinchilla_lanigera
ENSAPEG00000006533	SRL	83	75.325	ENSCHOG00000001618	SRL	52	74.286	Choloepus_hoffmanni
ENSAPEG00000006533	SRL	96	74.550	ENSCPBG00000026371	SRL	97	67.872	Chrysemys_picta_bellii
ENSAPEG00000006533	SRL	91	54.964	ENSCING00000005231	-	86	57.364	Ciona_intestinalis
ENSAPEG00000006533	SRL	99	70.110	ENSCANG00000035872	SRL	99	71.628	Colobus_angolensis_palliatus
ENSAPEG00000006533	SRL	99	71.209	ENSCGRG00001016630	Srl	96	71.209	Cricetulus_griseus_chok1gshd
ENSAPEG00000006533	SRL	99	71.209	ENSCGRG00000005458	Srl	96	71.209	Cricetulus_griseus_crigri
ENSAPEG00000006533	SRL	100	83.261	ENSCSEG00000011866	SRL	92	80.217	Cynoglossus_semilaevis
ENSAPEG00000006533	SRL	100	72.174	ENSCSEG00000016151	srl	97	71.678	Cynoglossus_semilaevis
ENSAPEG00000006533	SRL	96	75.000	ENSCVAG00000003513	srl	96	74.041	Cyprinodon_variegatus
ENSAPEG00000006533	SRL	98	82.391	ENSCVAG00000022465	SRL	61	80.652	Cyprinodon_variegatus
ENSAPEG00000006533	SRL	96	75.395	ENSDARG00000104587	srl	94	74.434	Danio_rerio
ENSAPEG00000006533	SRL	82	78.811	ENSDARG00000112959	CABZ01072309.1	100	78.906	Danio_rerio
ENSAPEG00000006533	SRL	96	69.451	ENSDNOG00000011643	SRL	54	70.110	Dasypus_novemcinctus
ENSAPEG00000006533	SRL	99	71.053	ENSDORG00000014807	Srl	97	69.935	Dipodomys_ordii
ENSAPEG00000006533	SRL	79	61.003	ENSEBUG00000015937	srl	82	65.138	Eptatretus_burgeri
ENSAPEG00000006533	SRL	96	70.044	ENSEASG00005000942	SRL	53	72.336	Equus_asinus_asinus
ENSAPEG00000006533	SRL	99	70.264	ENSECAG00000024219	SRL	96	70.264	Equus_caballus
ENSAPEG00000006533	SRL	100	71.158	ENSELUG00000015616	srl	98	69.474	Esox_lucius
ENSAPEG00000006533	SRL	96	71.946	ENSFCAG00000022075	SRL	96	70.330	Felis_catus
ENSAPEG00000006533	SRL	97	72.768	ENSFALG00000004328	SRL	63	72.036	Ficedula_albicollis
ENSAPEG00000006533	SRL	99	70.833	ENSFDAG00000006199	SRL	97	70.588	Fukomys_damarensis
ENSAPEG00000006533	SRL	98	84.719	ENSFHEG00000011854	SRL	100	84.270	Fundulus_heteroclitus
ENSAPEG00000006533	SRL	96	74.550	ENSFHEG00000011239	srl	96	74.041	Fundulus_heteroclitus
ENSAPEG00000006533	SRL	96	73.187	ENSGMOG00000014954	srl	100	72.687	Gadus_morhua
ENSAPEG00000006533	SRL	99	71.024	ENSGALG00000038884	SRL	97	70.306	Gallus_gallus
ENSAPEG00000006533	SRL	98	84.698	ENSGAFG00000016984	SRL	99	84.615	Gambusia_affinis
ENSAPEG00000006533	SRL	96	75.225	ENSGAFG00000000010	srl	96	74.718	Gambusia_affinis
ENSAPEG00000006533	SRL	96	72.747	ENSGACG00000011332	srl	99	71.586	Gasterosteus_aculeatus
ENSAPEG00000006533	SRL	99	70.110	ENSGGOG00000011312	-	96	70.110	Gorilla_gorilla
ENSAPEG00000006533	SRL	99	82.906	ENSHBUG00000015710	SRL	58	81.624	Haplochromis_burtoni
ENSAPEG00000006533	SRL	100	73.043	ENSHBUG00000007581	srl	99	73.230	Haplochromis_burtoni
ENSAPEG00000006533	SRL	99	70.989	ENSHGLG00000015271	SRL	96	70.989	Heterocephalus_glaber_female
ENSAPEG00000006533	SRL	99	70.989	ENSHGLG00100019378	SRL	96	70.989	Heterocephalus_glaber_male
ENSAPEG00000006533	SRL	100	72.826	ENSHCOG00000008687	srl	98	74.041	Hippocampus_comes
ENSAPEG00000006533	SRL	99	82.227	ENSHCOG00000001012	SRL	52	80.300	Hippocampus_comes
ENSAPEG00000006533	SRL	96	68.996	ENSIPUG00000011609	SRL	84	77.143	Ictalurus_punctatus
ENSAPEG00000006533	SRL	100	71.957	ENSIPUG00000012513	srl	96	72.321	Ictalurus_punctatus
ENSAPEG00000006533	SRL	99	71.209	ENSSTOG00000021151	-	96	71.429	Ictidomys_tridecemlineatus
ENSAPEG00000006533	SRL	99	69.481	ENSJJAG00000016400	Srl	96	70.330	Jaculus_jaculus
ENSAPEG00000006533	SRL	98	73.274	ENSKMAG00000014115	srl	93	75.059	Kryptolebias_marmoratus
ENSAPEG00000006533	SRL	99	81.303	ENSKMAG00000019537	SRL	100	84.793	Kryptolebias_marmoratus
ENSAPEG00000006533	SRL	99	87.146	ENSLBEG00000013811	SRL	99	84.532	Labrus_bergylta
ENSAPEG00000006533	SRL	100	72.826	ENSLBEG00000026643	srl	97	71.678	Labrus_bergylta
ENSAPEG00000006533	SRL	97	71.685	ENSLACG00000002825	SRL	98	70.721	Latimeria_chalumnae
ENSAPEG00000006533	SRL	97	74.157	ENSLOCG00000002644	srl	95	73.198	Lepisosteus_oculatus
ENSAPEG00000006533	SRL	96	71.719	ENSLAFG00000006329	SRL	50	72.336	Loxodonta_africana
ENSAPEG00000006533	SRL	94	71.628	ENSMFAG00000037383	SRL	99	71.628	Macaca_fascicularis
ENSAPEG00000006533	SRL	99	69.869	ENSMNEG00000019236	-	97	69.869	Macaca_nemestrina
ENSAPEG00000006533	SRL	99	64.396	ENSMLEG00000032156	SRL	96	64.396	Mandrillus_leucophaeus
ENSAPEG00000006533	SRL	97	83.696	ENSMAMG00000013756	SRL	54	84.130	Mastacembelus_armatus
ENSAPEG00000006533	SRL	96	74.324	ENSMAMG00000023322	srl	94	73.138	Mastacembelus_armatus
ENSAPEG00000006533	SRL	99	82.906	ENSMZEG00005004010	SRL	59	81.624	Maylandia_zebra
ENSAPEG00000006533	SRL	100	73.043	ENSMZEG00005004548	srl	99	73.230	Maylandia_zebra
ENSAPEG00000006533	SRL	99	71.586	ENSMGAG00000009342	SRL	97	77.546	Meleagris_gallopavo
ENSAPEG00000006533	SRL	99	71.648	ENSMICG00000032307	SRL	96	71.648	Microcebus_murinus
ENSAPEG00000006533	SRL	99	70.370	ENSMOCG00000008208	Srl	96	70.769	Microtus_ochrogaster
ENSAPEG00000006533	SRL	96	74.492	ENSMMOG00000013970	srl	98	73.982	Mola_mola
ENSAPEG00000006533	SRL	97	83.878	ENSMMOG00000021572	SRL	100	82.713	Mola_mola
ENSAPEG00000006533	SRL	96	73.982	ENSMODG00000016380	-	50	73.696	Monodelphis_domestica
ENSAPEG00000006533	SRL	98	73.942	ENSMALG00000005039	srl	100	73.230	Monopterus_albus
ENSAPEG00000006533	SRL	92	85.542	ENSMALG00000000670	SRL	99	84.746	Monopterus_albus
ENSAPEG00000006533	SRL	99	71.272	MGP_CAROLIEiJ_G0020400	Srl	97	70.153	Mus_caroli
ENSAPEG00000006533	SRL	99	71.272	ENSMUSG00000022519	Srl	97	70.153	Mus_musculus
ENSAPEG00000006533	SRL	99	71.272	MGP_SPRETEiJ_G0021294	Srl	97	70.153	Mus_spretus
ENSAPEG00000006533	SRL	96	71.946	ENSMPUG00000015025	SRL	53	72.109	Mustela_putorius_furo
ENSAPEG00000006533	SRL	96	69.890	ENSMLUG00000030733	SRL	56	71.719	Myotis_lucifugus
ENSAPEG00000006533	SRL	96	71.946	ENSNGAG00000019741	Srl	94	71.946	Nannospalax_galili
ENSAPEG00000006533	SRL	100	73.043	ENSNBRG00000023775	srl	98	72.549	Neolamprologus_brichardi
ENSAPEG00000006533	SRL	99	82.479	ENSNBRG00000002422	SRL	58	81.197	Neolamprologus_brichardi
ENSAPEG00000006533	SRL	96	67.195	ENSNLEG00000029051	SRL	95	65.934	Nomascus_leucogenys
ENSAPEG00000006533	SRL	96	67.195	ENSOPRG00000000477	-	52	67.647	Ochotona_princeps
ENSAPEG00000006533	SRL	99	70.769	ENSODEG00000013256	SRL	97	71.024	Octodon_degus
ENSAPEG00000006533	SRL	99	72.985	ENSONIG00000005192	srl	97	72.489	Oreochromis_niloticus
ENSAPEG00000006533	SRL	98	73.731	ENSORLG00000008291	srl	93	75.381	Oryzias_latipes
ENSAPEG00000006533	SRL	99	81.699	ENSORLG00000015064	SRL	100	81.938	Oryzias_latipes
ENSAPEG00000006533	SRL	98	83.296	ENSORLG00020018173	SRL	98	83.108	Oryzias_latipes_hni
ENSAPEG00000006533	SRL	96	75.450	ENSORLG00020019784	srl	81	75.381	Oryzias_latipes_hni
ENSAPEG00000006533	SRL	99	81.481	ENSORLG00015019063	SRL	100	81.938	Oryzias_latipes_hsok
ENSAPEG00000006533	SRL	96	75.225	ENSORLG00015009342	srl	94	72.113	Oryzias_latipes_hsok
ENSAPEG00000006533	SRL	98	83.369	ENSOMEG00000005682	SRL	54	82.505	Oryzias_melastigma
ENSAPEG00000006533	SRL	97	75.168	ENSOMEG00000010006	srl	99	74.664	Oryzias_melastigma
ENSAPEG00000006533	SRL	96	72.172	ENSOGAG00000029266	SRL	54	72.398	Otolemur_garnettii
ENSAPEG00000006533	SRL	99	69.584	ENSOARG00000003074	SRL	57	70.022	Ovis_aries
ENSAPEG00000006533	SRL	99	70.110	ENSPPAG00000024919	-	99	71.628	Pan_paniscus
ENSAPEG00000006533	SRL	96	71.946	ENSPPRG00000010274	SRL	99	71.628	Panthera_pardus
ENSAPEG00000006533	SRL	96	71.946	ENSPTIG00000015162	SRL	99	71.628	Panthera_tigris_altaica
ENSAPEG00000006533	SRL	99	70.110	ENSPTRG00000007712	SRL	99	71.628	Pan_troglodytes
ENSAPEG00000006533	SRL	99	69.869	ENSPANG00000013804	SRL	98	69.869	Papio_anubis
ENSAPEG00000006533	SRL	100	71.957	ENSPKIG00000024974	SRL	91	70.742	Paramormyrops_kingsleyae
ENSAPEG00000006533	SRL	100	74.675	ENSPKIG00000006405	srl	97	73.536	Paramormyrops_kingsleyae
ENSAPEG00000006533	SRL	96	82.844	ENSPMGG00000023505	-	99	83.834	Periophthalmus_magnuspinnatus
ENSAPEG00000006533	SRL	96	75.169	ENSPMGG00000021081	srl	99	72.489	Periophthalmus_magnuspinnatus
ENSAPEG00000006533	SRL	99	70.989	ENSPEMG00000015842	Srl	96	70.989	Peromyscus_maniculatus_bairdii
ENSAPEG00000006533	SRL	91	62.903	ENSPMAG00000004786	srl	86	67.639	Petromyzon_marinus
ENSAPEG00000006533	SRL	97	72.991	ENSPCIG00000012128	SRL	98	72.483	Phascolarctos_cinereus
ENSAPEG00000006533	SRL	96	73.684	ENSPFOG00000011408	srl	94	73.187	Poecilia_formosa
ENSAPEG00000006533	SRL	98	83.519	ENSPLAG00000002932	SRL	99	82.697	Poecilia_latipinna
ENSAPEG00000006533	SRL	96	75.225	ENSPLAG00000008017	srl	96	74.718	Poecilia_latipinna
ENSAPEG00000006533	SRL	96	75.225	ENSPMEG00000006745	srl	96	74.718	Poecilia_mexicana
ENSAPEG00000006533	SRL	99	82.479	ENSPMEG00000005890	SRL	61	81.624	Poecilia_mexicana
ENSAPEG00000006533	SRL	98	84.410	ENSPREG00000000315	SRL	99	83.596	Poecilia_reticulata
ENSAPEG00000006533	SRL	96	75.000	ENSPREG00000007751	srl	98	74.492	Poecilia_reticulata
ENSAPEG00000006533	SRL	94	71.628	ENSPPYG00000007053	SRL	100	71.628	Pongo_abelii
ENSAPEG00000006533	SRL	96	70.705	ENSPCAG00000003378	-	50	73.016	Procavia_capensis
ENSAPEG00000006533	SRL	99	71.209	ENSPCOG00000023135	SRL	99	72.326	Propithecus_coquereli
ENSAPEG00000006533	SRL	96	70.110	ENSPVAG00000006586	SRL	54	71.946	Pteropus_vampyrus
ENSAPEG00000006533	SRL	100	73.043	ENSPNYG00000001200	srl	99	73.230	Pundamilia_nyererei
ENSAPEG00000006533	SRL	99	82.906	ENSPNYG00000003423	SRL	58	81.624	Pundamilia_nyererei
ENSAPEG00000006533	SRL	98	76.549	ENSPNAG00000007361	-	93	76.000	Pygocentrus_nattereri
ENSAPEG00000006533	SRL	98	73.230	ENSPNAG00000023106	srl	94	73.303	Pygocentrus_nattereri
ENSAPEG00000006533	SRL	99	68.153	ENSRBIG00000042358	SRL	51	70.306	Rhinopithecus_bieti
ENSAPEG00000006533	SRL	96	71.946	ENSSBOG00000029273	SRL	96	70.549	Saimiri_boliviensis_boliviensis
ENSAPEG00000006533	SRL	99	72.368	ENSSHAG00000011715	-	51	71.429	Sarcophilus_harrisii
ENSAPEG00000006533	SRL	96	72.912	ENSSFOG00015021327	SRL	51	70.199	Scleropages_formosus
ENSAPEG00000006533	SRL	96	74.944	ENSSFOG00015009773	srl	98	71.991	Scleropages_formosus
ENSAPEG00000006533	SRL	98	83.906	ENSSMAG00000002232	SRL	51	83.476	Scophthalmus_maximus
ENSAPEG00000006533	SRL	98	73.719	ENSSMAG00000016274	srl	99	72.210	Scophthalmus_maximus
ENSAPEG00000006533	SRL	98	86.130	ENSSDUG00000009161	SRL	99	85.459	Seriola_dumerili
ENSAPEG00000006533	SRL	96	74.550	ENSSDUG00000010808	srl	98	73.363	Seriola_dumerili
ENSAPEG00000006533	SRL	96	74.550	ENSSLDG00000022024	srl	96	73.363	Seriola_lalandi_dorsalis
ENSAPEG00000006533	SRL	96	86.593	ENSSLDG00000014601	SRL	99	85.934	Seriola_lalandi_dorsalis
ENSAPEG00000006533	SRL	96	72.072	ENSSPUG00000016859	SRL	98	71.332	Sphenodon_punctatus
ENSAPEG00000006533	SRL	100	72.727	ENSSPAG00000019105	srl	98	70.613	Stegastes_partitus
ENSAPEG00000006533	SRL	98	89.111	ENSSPAG00000014254	SRL	100	89.367	Stegastes_partitus
ENSAPEG00000006533	SRL	96	72.336	ENSSSCG00000007949	SRL	98	72.336	Sus_scrofa
ENSAPEG00000006533	SRL	97	72.768	ENSTGUG00000003951	-	98	72.036	Taeniopygia_guttata
ENSAPEG00000006533	SRL	81	76.923	ENSTGUG00000016121	-	91	83.792	Taeniopygia_guttata
ENSAPEG00000006533	SRL	100	73.261	ENSTRUG00000006005	srl	97	72.767	Takifugu_rubripes
ENSAPEG00000006533	SRL	91	83.810	ENSTRUG00000013310	SRL	55	83.575	Takifugu_rubripes
ENSAPEG00000006533	SRL	96	75.000	ENSTNIG00000009739	srl	97	72.926	Tetraodon_nigroviridis
ENSAPEG00000006533	SRL	96	71.946	ENSUAMG00000005701	SRL	55	72.398	Ursus_americanus
ENSAPEG00000006533	SRL	96	71.946	ENSUMAG00000002574	SRL	55	72.398	Ursus_maritimus
ENSAPEG00000006533	SRL	96	73.198	ENSXETG00000017313	srl	98	72.686	Xenopus_tropicalis
ENSAPEG00000006533	SRL	92	75.708	ENSXCOG00000010424	srl	97	75.177	Xiphophorus_couchianus
ENSAPEG00000006533	SRL	98	83.814	ENSXCOG00000014584	SRL	99	83.784	Xiphophorus_couchianus
ENSAPEG00000006533	SRL	99	83.120	ENSXMAG00000027598	SRL	64	82.479	Xiphophorus_maculatus
ENSAPEG00000006533	SRL	96	75.000	ENSXMAG00000004625	srl	93	72.113	Xiphophorus_maculatus