EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006572 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 2048 bases
Position: chr1:29146868-29148915
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000009153	zf-C2H2	PF00096.26	6.1e-09	1	2
ENSAPEP00000009153	zf-C2H2	PF00096.26	6.1e-09	2	2
ENSAPEP00000009153	zf-met	PF12874.7	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009404	-	633	-	ENSAPEP00000009153	210 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006572	-	52	57.812	ENSAPEG00000016536	-	93	57.812
ENSAPEG00000006572	-	77	50.769	ENSAPEG00000015593	-	84	50.769
ENSAPEG00000006572	-	83	53.521	ENSAPEG00000006650	-	85	54.688
ENSAPEG00000006572	-	87	51.667	ENSAPEG00000007141	-	65	51.667
ENSAPEG00000006572	-	87	46.154	ENSAPEG00000001556	-	79	48.438
ENSAPEG00000006572	-	88	47.692	ENSAPEG00000009553	-	58	49.231
ENSAPEG00000006572	-	79	57.812	ENSAPEG00000013550	-	96	59.375
ENSAPEG00000006572	-	83	56.061	ENSAPEG00000018332	-	70	56.250
ENSAPEG00000006572	-	60	44.444	ENSAPEG00000000208	ZNF319	66	46.154
ENSAPEG00000006572	-	90	48.485	ENSAPEG00000011635	-	88	49.231
ENSAPEG00000006572	-	51	48.438	ENSAPEG00000005677	-	60	48.438
ENSAPEG00000006572	-	76	52.308	ENSAPEG00000016118	-	94	60.000
ENSAPEG00000006572	-	89	59.375	ENSAPEG00000009383	-	87	59.375
ENSAPEG00000006572	-	83	56.061	ENSAPEG00000018316	-	70	56.250
ENSAPEG00000006572	-	78	56.250	ENSAPEG00000015337	-	93	58.065
ENSAPEG00000006572	-	50	52.308	ENSAPEG00000009997	-	74	52.308
ENSAPEG00000006572	-	79	50.633	ENSAPEG00000005566	-	75	50.769
ENSAPEG00000006572	-	89	54.237	ENSAPEG00000008020	-	98	54.688
ENSAPEG00000006572	-	84	53.125	ENSAPEG00000007389	-	93	52.308
ENSAPEG00000006572	-	89	56.250	ENSAPEG00000005462	-	91	52.308
ENSAPEG00000006572	-	78	54.688	ENSAPEG00000017116	-	79	54.688
ENSAPEG00000006572	-	79	53.125	ENSAPEG00000011020	-	95	58.824
ENSAPEG00000006572	-	87	50.000	ENSAPEG00000011646	-	75	51.562
ENSAPEG00000006572	-	81	59.375	ENSAPEG00000013031	-	72	59.375
ENSAPEG00000006572	-	87	54.688	ENSAPEG00000003892	-	73	55.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006572	-	80	83.243	ENSAPOG00000021966	-	74	83.152	Acanthochromis_polyacanthus
ENSAPEG00000006572	-	80	89.730	ENSAOCG00000022529	-	74	89.730	Amphiprion_ocellaris
ENSAPEG00000006572	-	77	32.530	ENSAOCG00000020652	-	59	32.530	Amphiprion_ocellaris
ENSAPEG00000006572	-	61	49.231	ENSATEG00000022064	-	92	49.231	Anabas_testudineus
ENSAPEG00000006572	-	59	47.170	ENSATEG00000014684	-	88	47.170	Anabas_testudineus
ENSAPEG00000006572	-	77	46.667	ENSACLG00000020333	-	87	46.667	Astatotilapia_calliptera
ENSAPEG00000006572	-	69	46.875	ENSACLG00000005795	-	85	48.077	Astatotilapia_calliptera
ENSAPEG00000006572	-	77	46.667	ENSACLG00000006718	-	87	46.667	Astatotilapia_calliptera
ENSAPEG00000006572	-	88	59.563	ENSACLG00000008374	-	78	59.890	Astatotilapia_calliptera
ENSAPEG00000006572	-	53	53.061	ENSAMXG00000007973	-	88	48.438	Astyanax_mexicanus
ENSAPEG00000006572	-	57	50.000	ENSCSEG00000019848	-	64	49.206	Cynoglossus_semilaevis
ENSAPEG00000006572	-	53	40.625	ENSCVAG00000000161	-	51	40.625	Cyprinodon_variegatus
ENSAPEG00000006572	-	79	45.312	ENSHBUG00000013065	-	78	48.077	Haplochromis_burtoni
ENSAPEG00000006572	-	61	39.744	ENSHBUG00000020527	-	93	40.789	Haplochromis_burtoni
ENSAPEG00000006572	-	81	46.154	ENSHBUG00000011944	-	79	46.154	Haplochromis_burtoni
ENSAPEG00000006572	-	88	59.016	ENSHBUG00000017924	-	78	59.341	Haplochromis_burtoni
ENSAPEG00000006572	-	81	57.838	ENSLBEG00000008850	-	77	57.923	Labrus_bergylta
ENSAPEG00000006572	-	54	34.426	ENSLBEG00000008909	-	92	36.232	Labrus_bergylta
ENSAPEG00000006572	-	81	46.154	ENSMZEG00005025965	-	79	46.154	Maylandia_zebra
ENSAPEG00000006572	-	88	59.563	ENSMZEG00005011431	-	73	91.429	Maylandia_zebra
ENSAPEG00000006572	-	79	46.875	ENSMZEG00005011812	-	78	48.077	Maylandia_zebra
ENSAPEG00000006572	-	55	43.939	ENSMZEG00005027551	-	89	45.312	Maylandia_zebra
ENSAPEG00000006572	-	77	38.095	ENSMALG00000012840	-	70	38.095	Monopterus_albus
ENSAPEG00000006572	-	78	60.976	ENSMALG00000005696	-	78	62.431	Monopterus_albus
ENSAPEG00000006572	-	88	60.355	ENSNBRG00000004792	-	77	60.714	Neolamprologus_brichardi
ENSAPEG00000006572	-	75	47.541	ENSPLAG00000013745	-	82	45.312	Poecilia_latipinna
ENSAPEG00000006572	-	81	46.154	ENSPNYG00000019325	-	91	46.154	Pundamilia_nyererei
ENSAPEG00000006572	-	88	59.016	ENSPNYG00000016157	-	78	59.341	Pundamilia_nyererei
ENSAPEG00000006572	-	69	45.312	ENSPNYG00000011024	-	85	48.077	Pundamilia_nyererei
ENSAPEG00000006572	-	90	50.000	ENSPNAG00000011660	-	57	50.000	Pygocentrus_nattereri
ENSAPEG00000006572	-	77	50.769	ENSSMAG00000006902	-	76	50.769	Scophthalmus_maximus
ENSAPEG00000006572	-	79	45.161	ENSSMAG00000013663	-	86	49.231	Scophthalmus_maximus
ENSAPEG00000006572	-	79	69.355	ENSSDUG00000022035	-	72	69.189	Seriola_dumerili
ENSAPEG00000006572	-	79	68.817	ENSSLDG00000025676	-	72	68.649	Seriola_lalandi_dorsalis
ENSAPEG00000006572	-	79	67.647	ENSSPAG00000007691	-	92	67.327	Stegastes_partitus
ENSAPEG00000006572	-	60	48.387	ENSSPAG00000007403	-	79	47.917	Stegastes_partitus
ENSAPEG00000006572	-	75	62.500	ENSTRUG00000023491	-	88	62.500	Takifugu_rubripes
ENSAPEG00000006572	-	50	44.444	ENSTRUG00000021167	-	67	46.667	Takifugu_rubripes
ENSAPEG00000006572	-	51	36.111	ENSXCOG00000020769	-	88	41.538	Xiphophorus_couchianus
ENSAPEG00000006572	-	55	55.556	ENSXCOG00000011372	-	71	55.556	Xiphophorus_couchianus