EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006911 (Gene tree)
Gene ID: -
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 14054 bases
Position: chr14:672080-686133
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000009630	MMR_HSR1	PF01926.23	1.8e-08	1	1
ENSAPEP00000009639	MMR_HSR1	PF01926.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009893	-	4096	-	ENSAPEP00000009630	483 (aa)	-	UPI000C315D59
ENSAPET00000009903	-	4060	-	ENSAPEP00000009639	471 (aa)	-	UPI000C3110F1

Gene Model

Click here to download ENSAPEG00000006911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006911	srl	87	32.394	ENSAPEG00000013956	ehd2b	74	33.092
ENSAPEG00000006911	srl	97	71.460	ENSAPEG00000006533	SRL	100	72.609
ENSAPEG00000006911	srl	53	38.645	ENSAPEG00000019382	-	77	30.115
ENSAPEG00000006911	srl	79	33.780	ENSAPEG00000018380	ehd3	69	34.026
ENSAPEG00000006911	srl	83	30.750	ENSAPEG00000010363	ehd1a	70	31.701
ENSAPEG00000006911	srl	85	31.762	ENSAPEG00000013326	ehd4	71	31.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006911	srl	100	80.338	ENSG00000185739	SRL	99	83.721	Homo_sapiens
ENSAPEG00000006911	srl	100	99.788	ENSAPOG00000018093	srl	100	99.788	Acanthochromis_polyacanthus
ENSAPEG00000006911	srl	94	77.149	ENSAPOG00000012432	SRL	98	77.149	Acanthochromis_polyacanthus
ENSAPEG00000006911	srl	98	81.210	ENSAMEG00000010862	SRL	52	81.210	Ailuropoda_melanoleuca
ENSAPEG00000006911	srl	96	97.339	ENSACIG00000015799	srl	100	97.339	Amphilophus_citrinellus
ENSAPEG00000006911	srl	95	74.777	ENSACIG00000015419	SRL	99	74.777	Amphilophus_citrinellus
ENSAPEG00000006911	srl	92	100.000	ENSAOCG00000007574	srl	100	100.000	Amphiprion_ocellaris
ENSAPEG00000006911	srl	97	75.435	ENSAOCG00000017049	SRL	100	75.652	Amphiprion_ocellaris
ENSAPEG00000006911	srl	100	97.723	ENSATEG00000024315	srl	100	97.723	Anabas_testudineus
ENSAPEG00000006911	srl	97	75.000	ENSATEG00000009643	SRL	52	76.535	Anabas_testudineus
ENSAPEG00000006911	srl	94	84.768	ENSACAG00000016380	SRL	89	81.557	Anolis_carolinensis
ENSAPEG00000006911	srl	97	73.077	ENSACLG00000024674	SRL	54	77.250	Astatotilapia_calliptera
ENSAPEG00000006911	srl	100	97.101	ENSACLG00000027685	srl	100	97.101	Astatotilapia_calliptera
ENSAPEG00000006911	srl	99	92.739	ENSAMXG00000018789	srl	92	92.739	Astyanax_mexicanus
ENSAPEG00000006911	srl	93	75.399	ENSAMXG00000038693	SRL	100	74.834	Astyanax_mexicanus
ENSAPEG00000006911	srl	96	82.456	ENSBTAG00000001078	SRL	58	82.456	Bos_taurus
ENSAPEG00000006911	srl	94	83.484	ENSCJAG00000019750	SRL	100	80.550	Callithrix_jacchus
ENSAPEG00000006911	srl	97	81.004	ENSCAFG00000019233	SRL	85	81.004	Canis_familiaris
ENSAPEG00000006911	srl	96	81.898	ENSCAFG00020025024	SRL	56	81.898	Canis_lupus_dingo
ENSAPEG00000006911	srl	99	81.545	ENSCHIG00000017927	SRL	57	82.857	Capra_hircus
ENSAPEG00000006911	srl	100	80.550	ENSTSYG00000007919	SRL	99	84.419	Carlito_syrichta
ENSAPEG00000006911	srl	96	82.522	ENSCPOG00000012643	SRL	100	80.720	Cavia_porcellus
ENSAPEG00000006911	srl	94	77.828	ENSCCAG00000032646	SRL	100	84.697	Cebus_capucinus
ENSAPEG00000006911	srl	96	82.379	ENSCATG00000032227	-	100	80.550	Cercocebus_atys
ENSAPEG00000006911	srl	96	82.743	ENSCLAG00000016242	SRL	100	80.932	Chinchilla_lanigera
ENSAPEG00000006911	srl	82	86.234	ENSCHOG00000001618	SRL	52	86.234	Choloepus_hoffmanni
ENSAPEG00000006911	srl	96	85.751	ENSCPBG00000026371	SRL	99	80.952	Chrysemys_picta_bellii
ENSAPEG00000006911	srl	89	60.047	ENSCING00000005231	-	93	60.671	Ciona_intestinalis
ENSAPEG00000006911	srl	96	82.379	ENSCANG00000035872	SRL	99	83.721	Colobus_angolensis_palliatus
ENSAPEG00000006911	srl	96	83.407	ENSCGRG00001016630	Srl	100	81.356	Cricetulus_griseus_chok1gshd
ENSAPEG00000006911	srl	96	83.407	ENSCGRG00000005458	Srl	100	81.356	Cricetulus_griseus_crigri
ENSAPEG00000006911	srl	100	95.754	ENSCSEG00000016151	srl	100	95.754	Cynoglossus_semilaevis
ENSAPEG00000006911	srl	99	72.921	ENSCSEG00000011866	SRL	94	73.134	Cynoglossus_semilaevis
ENSAPEG00000006911	srl	97	75.000	ENSCVAG00000022465	SRL	62	75.000	Cyprinodon_variegatus
ENSAPEG00000006911	srl	100	94.824	ENSCVAG00000003513	srl	100	94.824	Cyprinodon_variegatus
ENSAPEG00000006911	srl	80	78.125	ENSDARG00000112959	CABZ01072309.1	100	78.125	Danio_rerio
ENSAPEG00000006911	srl	100	91.511	ENSDARG00000104587	srl	100	91.511	Danio_rerio
ENSAPEG00000006911	srl	95	82.889	ENSDNOG00000011643	SRL	54	82.781	Dasypus_novemcinctus
ENSAPEG00000006911	srl	96	82.675	ENSDORG00000014807	Srl	100	81.356	Dipodomys_ordii
ENSAPEG00000006911	srl	79	65.775	ENSEBUG00000015937	srl	94	65.775	Eptatretus_burgeri
ENSAPEG00000006911	srl	94	83.900	ENSEASG00005000942	SRL	55	82.018	Equus_asinus_asinus
ENSAPEG00000006911	srl	99	81.144	ENSECAG00000024219	SRL	99	81.144	Equus_caballus
ENSAPEG00000006911	srl	100	87.295	ENSELUG00000015616	srl	100	87.295	Esox_lucius
ENSAPEG00000006911	srl	100	79.704	ENSFCAG00000022075	SRL	100	80.127	Felis_catus
ENSAPEG00000006911	srl	96	82.262	ENSFALG00000004328	SRL	64	82.262	Ficedula_albicollis
ENSAPEG00000006911	srl	96	83.407	ENSFDAG00000006199	SRL	100	81.780	Fukomys_damarensis
ENSAPEG00000006911	srl	100	72.990	ENSFHEG00000011854	SRL	99	76.802	Fundulus_heteroclitus
ENSAPEG00000006911	srl	100	94.824	ENSFHEG00000011239	srl	100	94.824	Fundulus_heteroclitus
ENSAPEG00000006911	srl	94	92.731	ENSGMOG00000014954	srl	100	92.731	Gadus_morhua
ENSAPEG00000006911	srl	99	80.892	ENSGALG00000038884	SRL	99	80.892	Gallus_gallus
ENSAPEG00000006911	srl	100	95.238	ENSGAFG00000000010	srl	100	95.238	Gambusia_affinis
ENSAPEG00000006911	srl	95	77.283	ENSGAFG00000016984	SRL	100	77.283	Gambusia_affinis
ENSAPEG00000006911	srl	94	97.143	ENSGACG00000011332	srl	100	97.143	Gasterosteus_aculeatus
ENSAPEG00000006911	srl	100	80.338	ENSGGOG00000011312	-	100	80.338	Gorilla_gorilla
ENSAPEG00000006911	srl	100	97.101	ENSHBUG00000007581	srl	100	97.101	Haplochromis_burtoni
ENSAPEG00000006911	srl	97	73.504	ENSHBUG00000015710	SRL	58	73.504	Haplochromis_burtoni
ENSAPEG00000006911	srl	96	83.186	ENSHGLG00000015271	SRL	100	81.356	Heterocephalus_glaber_female
ENSAPEG00000006911	srl	96	83.186	ENSHGLG00100019378	SRL	100	81.356	Heterocephalus_glaber_male
ENSAPEG00000006911	srl	94	74.725	ENSHCOG00000001012	SRL	50	74.725	Hippocampus_comes
ENSAPEG00000006911	srl	100	95.975	ENSHCOG00000008687	srl	99	96.875	Hippocampus_comes
ENSAPEG00000006911	srl	100	91.925	ENSIPUG00000012513	srl	100	91.925	Ictalurus_punctatus
ENSAPEG00000006911	srl	93	70.183	ENSIPUG00000011609	SRL	95	70.183	Ictalurus_punctatus
ENSAPEG00000006911	srl	96	82.965	ENSSTOG00000021151	-	100	80.932	Ictidomys_tridecemlineatus
ENSAPEG00000006911	srl	100	81.992	ENSJJAG00000016400	Srl	100	81.992	Jaculus_jaculus
ENSAPEG00000006911	srl	94	77.098	ENSKMAG00000019537	SRL	100	77.098	Kryptolebias_marmoratus
ENSAPEG00000006911	srl	98	95.349	ENSKMAG00000014115	srl	95	95.349	Kryptolebias_marmoratus
ENSAPEG00000006911	srl	100	95.966	ENSLBEG00000026643	srl	100	95.966	Labrus_bergylta
ENSAPEG00000006911	srl	97	74.074	ENSLBEG00000013811	SRL	99	74.292	Labrus_bergylta
ENSAPEG00000006911	srl	100	82.851	ENSLACG00000002825	SRL	100	84.071	Latimeria_chalumnae
ENSAPEG00000006911	srl	99	87.794	ENSLOCG00000002644	srl	99	87.794	Lepisosteus_oculatus
ENSAPEG00000006911	srl	96	82.119	ENSLAFG00000006329	SRL	52	82.119	Loxodonta_africana
ENSAPEG00000006911	srl	91	83.721	ENSMFAG00000037383	SRL	99	83.721	Macaca_fascicularis
ENSAPEG00000006911	srl	97	81.441	ENSMNEG00000019236	-	97	81.441	Macaca_nemestrina
ENSAPEG00000006911	srl	96	75.330	ENSMLEG00000032156	SRL	100	73.784	Mandrillus_leucophaeus
ENSAPEG00000006911	srl	99	95.717	ENSMAMG00000023322	srl	99	95.717	Mastacembelus_armatus
ENSAPEG00000006911	srl	94	75.771	ENSMAMG00000013756	SRL	53	75.771	Mastacembelus_armatus
ENSAPEG00000006911	srl	100	97.101	ENSMZEG00005004548	srl	100	97.101	Maylandia_zebra
ENSAPEG00000006911	srl	97	73.291	ENSMZEG00005004010	SRL	59	73.291	Maylandia_zebra
ENSAPEG00000006911	srl	96	82.159	ENSMGAG00000009342	SRL	97	83.290	Meleagris_gallopavo
ENSAPEG00000006911	srl	96	82.237	ENSMICG00000032307	SRL	100	80.761	Microcebus_murinus
ENSAPEG00000006911	srl	100	80.508	ENSMOCG00000008208	Srl	100	80.508	Microtus_ochrogaster
ENSAPEG00000006911	srl	96	96.889	ENSMMOG00000013970	srl	100	96.889	Mola_mola
ENSAPEG00000006911	srl	94	74.725	ENSMMOG00000021572	SRL	99	74.725	Mola_mola
ENSAPEG00000006911	srl	96	83.592	ENSMODG00000016380	-	51	83.592	Monodelphis_domestica
ENSAPEG00000006911	srl	100	95.541	ENSMALG00000005039	srl	100	95.541	Monopterus_albus
ENSAPEG00000006911	srl	89	76.850	ENSMALG00000000670	SRL	98	76.850	Monopterus_albus
ENSAPEG00000006911	srl	97	83.516	MGP_CAROLIEiJ_G0020400	Srl	100	82.415	Mus_caroli
ENSAPEG00000006911	srl	97	83.516	ENSMUSG00000022519	Srl	100	82.415	Mus_musculus
ENSAPEG00000006911	srl	97	83.516	MGP_SPRETEiJ_G0021294	Srl	100	82.415	Mus_spretus
ENSAPEG00000006911	srl	96	82.119	ENSMPUG00000015025	SRL	55	82.119	Mustela_putorius_furo
ENSAPEG00000006911	srl	97	82.533	ENSMLUG00000030733	SRL	58	82.533	Myotis_lucifugus
ENSAPEG00000006911	srl	94	85.068	ENSNGAG00000019741	Srl	100	81.992	Nannospalax_galili
ENSAPEG00000006911	srl	97	73.291	ENSNBRG00000002422	SRL	56	75.926	Neolamprologus_brichardi
ENSAPEG00000006911	srl	100	96.603	ENSNBRG00000023775	srl	100	96.603	Neolamprologus_brichardi
ENSAPEG00000006911	srl	97	76.044	ENSNLEG00000029051	SRL	100	74.630	Nomascus_leucogenys
ENSAPEG00000006911	srl	96	76.600	ENSOPRG00000000477	-	53	76.600	Ochotona_princeps
ENSAPEG00000006911	srl	97	82.637	ENSODEG00000013256	SRL	100	81.144	Octodon_degus
ENSAPEG00000006911	srl	100	97.101	ENSONIG00000005192	srl	100	97.101	Oreochromis_niloticus
ENSAPEG00000006911	srl	97	81.441	ENSOCUG00000025140	SRL	50	81.441	Oryctolagus_cuniculus
ENSAPEG00000006911	srl	100	96.066	ENSORLG00000008291	srl	97	96.066	Oryzias_latipes
ENSAPEG00000006911	srl	94	75.169	ENSORLG00000015064	SRL	97	75.169	Oryzias_latipes
ENSAPEG00000006911	srl	100	96.480	ENSORLG00020019784	srl	85	96.480	Oryzias_latipes_hni
ENSAPEG00000006911	srl	94	75.395	ENSORLG00020018173	SRL	97	75.395	Oryzias_latipes_hni
ENSAPEG00000006911	srl	100	96.480	ENSORLG00015009342	srl	97	96.480	Oryzias_latipes_hsok
ENSAPEG00000006911	srl	94	75.395	ENSORLG00015019063	SRL	97	75.395	Oryzias_latipes_hsok
ENSAPEG00000006911	srl	94	73.904	ENSOMEG00000005682	SRL	53	74.179	Oryzias_melastigma
ENSAPEG00000006911	srl	100	95.859	ENSOMEG00000010006	srl	100	95.859	Oryzias_melastigma
ENSAPEG00000006911	srl	96	81.798	ENSOGAG00000029266	SRL	56	81.798	Otolemur_garnettii
ENSAPEG00000006911	srl	99	81.585	ENSOARG00000003074	SRL	58	81.585	Ovis_aries
ENSAPEG00000006911	srl	96	82.340	ENSPPAG00000024919	-	99	83.721	Pan_paniscus
ENSAPEG00000006911	srl	100	79.704	ENSPPRG00000010274	SRL	99	83.488	Panthera_pardus
ENSAPEG00000006911	srl	100	79.704	ENSPTIG00000015162	SRL	99	83.488	Panthera_tigris_altaica
ENSAPEG00000006911	srl	100	80.338	ENSPTRG00000007712	SRL	99	83.721	Pan_troglodytes
ENSAPEG00000006911	srl	97	81.441	ENSPANG00000013804	SRL	98	81.441	Papio_anubis
ENSAPEG00000006911	srl	100	91.772	ENSPKIG00000006405	srl	100	91.772	Paramormyrops_kingsleyae
ENSAPEG00000006911	srl	100	78.556	ENSPKIG00000024974	SRL	94	78.556	Paramormyrops_kingsleyae
ENSAPEG00000006911	srl	94	83.296	ENSPSIG00000008586	SRL	50	83.296	Pelodiscus_sinensis
ENSAPEG00000006911	srl	97	93.231	ENSPMGG00000021081	srl	99	93.231	Periophthalmus_magnuspinnatus
ENSAPEG00000006911	srl	94	75.566	ENSPMGG00000023505	-	99	75.566	Periophthalmus_magnuspinnatus
ENSAPEG00000006911	srl	96	82.965	ENSPEMG00000015842	Srl	100	81.144	Peromyscus_maniculatus_bairdii
ENSAPEG00000006911	srl	89	69.108	ENSPMAG00000004786	srl	99	69.108	Petromyzon_marinus
ENSAPEG00000006911	srl	96	83.149	ENSPCIG00000012128	SRL	99	83.149	Phascolarctos_cinereus
ENSAPEG00000006911	srl	100	95.445	ENSPFOG00000011408	srl	98	93.096	Poecilia_formosa
ENSAPEG00000006911	srl	95	75.947	ENSPLAG00000002932	SRL	100	75.947	Poecilia_latipinna
ENSAPEG00000006911	srl	98	93.926	ENSPLAG00000008017	srl	100	93.926	Poecilia_latipinna
ENSAPEG00000006911	srl	97	74.145	ENSPMEG00000005890	SRL	61	73.718	Poecilia_mexicana
ENSAPEG00000006911	srl	100	95.329	ENSPMEG00000006745	srl	100	93.926	Poecilia_mexicana
ENSAPEG00000006911	srl	100	95.445	ENSPREG00000007751	srl	99	95.778	Poecilia_reticulata
ENSAPEG00000006911	srl	97	75.214	ENSPREG00000000315	SRL	100	77.060	Poecilia_reticulata
ENSAPEG00000006911	srl	89	85.203	ENSPPYG00000007053	SRL	98	85.203	Pongo_abelii
ENSAPEG00000006911	srl	96	82.418	ENSPCAG00000003378	-	51	82.418	Procavia_capensis
ENSAPEG00000006911	srl	97	81.878	ENSPCOG00000023135	SRL	99	84.186	Propithecus_coquereli
ENSAPEG00000006911	srl	96	82.781	ENSPVAG00000006586	SRL	56	82.781	Pteropus_vampyrus
ENSAPEG00000006911	srl	100	96.894	ENSPNYG00000001200	srl	100	96.894	Pundamilia_nyererei
ENSAPEG00000006911	srl	97	73.291	ENSPNYG00000003423	SRL	58	73.291	Pundamilia_nyererei
ENSAPEG00000006911	srl	94	75.964	ENSPNAG00000007361	-	91	75.964	Pygocentrus_nattereri
ENSAPEG00000006911	srl	100	92.340	ENSPNAG00000023106	srl	100	92.340	Pygocentrus_nattereri
ENSAPEG00000006911	srl	96	83.114	ENSRNOG00000005269	Srl	50	83.114	Rattus_norvegicus
ENSAPEG00000006911	srl	96	82.018	ENSRBIG00000042358	SRL	51	82.018	Rhinopithecus_bieti
ENSAPEG00000006911	srl	94	83.484	ENSSBOG00000029273	SRL	100	80.550	Saimiri_boliviensis_boliviensis
ENSAPEG00000006911	srl	96	82.819	ENSSHAG00000011715	-	51	83.333	Sarcophilus_harrisii
ENSAPEG00000006911	srl	94	78.153	ENSSFOG00015021327	SRL	50	77.679	Scleropages_formosus
ENSAPEG00000006911	srl	100	91.529	ENSSFOG00015009773	srl	100	91.529	Scleropages_formosus
ENSAPEG00000006911	srl	94	75.165	ENSSMAG00000002232	SRL	50	75.165	Scophthalmus_maximus
ENSAPEG00000006911	srl	100	96.603	ENSSMAG00000016274	srl	100	96.603	Scophthalmus_maximus
ENSAPEG00000006911	srl	94	77.111	ENSSDUG00000009161	SRL	99	77.111	Seriola_dumerili
ENSAPEG00000006911	srl	94	97.748	ENSSDUG00000010808	srl	98	97.748	Seriola_dumerili
ENSAPEG00000006911	srl	94	76.856	ENSSLDG00000014601	SRL	100	77.412	Seriola_lalandi_dorsalis
ENSAPEG00000006911	srl	100	96.894	ENSSLDG00000022024	srl	100	96.894	Seriola_lalandi_dorsalis
ENSAPEG00000006911	srl	96	82.743	ENSSPUG00000016859	SRL	99	82.743	Sphenodon_punctatus
ENSAPEG00000006911	srl	94	78.231	ENSSPAG00000014254	SRL	98	78.231	Stegastes_partitus
ENSAPEG00000006911	srl	100	98.967	ENSSPAG00000019105	srl	100	98.967	Stegastes_partitus
ENSAPEG00000006911	srl	96	82.018	ENSSSCG00000007949	SRL	98	83.673	Sus_scrofa
ENSAPEG00000006911	srl	77	85.912	ENSTGUG00000016121	-	100	85.912	Taeniopygia_guttata
ENSAPEG00000006911	srl	96	82.483	ENSTGUG00000003951	-	99	82.483	Taeniopygia_guttata
ENSAPEG00000006911	srl	89	78.282	ENSTRUG00000013310	SRL	55	78.282	Takifugu_rubripes
ENSAPEG00000006911	srl	100	96.815	ENSTRUG00000006005	srl	100	96.815	Takifugu_rubripes
ENSAPEG00000006911	srl	100	96.178	ENSTNIG00000009739	srl	100	96.178	Tetraodon_nigroviridis
ENSAPEG00000006911	srl	96	81.718	ENSUAMG00000005701	SRL	56	81.718	Ursus_americanus
ENSAPEG00000006911	srl	96	81.718	ENSUMAG00000002574	SRL	56	81.718	Ursus_maritimus
ENSAPEG00000006911	srl	97	81.182	ENSVVUG00000016331	-	50	81.182	Vulpes_vulpes
ENSAPEG00000006911	srl	99	78.891	ENSXETG00000017313	srl	99	81.416	Xenopus_tropicalis
ENSAPEG00000006911	srl	89	95.724	ENSXCOG00000010424	srl	97	95.724	Xiphophorus_couchianus
ENSAPEG00000006911	srl	96	77.111	ENSXCOG00000014584	SRL	99	77.111	Xiphophorus_couchianus
ENSAPEG00000006911	srl	100	95.238	ENSXMAG00000004625	srl	95	95.238	Xiphophorus_maculatus
ENSAPEG00000006911	srl	97	74.359	ENSXMAG00000027598	SRL	64	74.359	Xiphophorus_maculatus