EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000006945 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 12624 bases
Position: chr2:43226717-43239340
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000009690	RTC	PF01137.21	5.6e-88	1	1
ENSAPEP00000009690	RTC_insert	PF05189.13	2.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009954	-	4223	-	ENSAPEP00000009690	366 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006945	rtca	99	71.038	ENSG00000137996	RTCA	100	71.038	Homo_sapiens
ENSAPEG00000006945	rtca	100	97.541	ENSAPOG00000001345	rtca	100	97.541	Acanthochromis_polyacanthus
ENSAPEG00000006945	rtca	73	72.119	ENSAMEG00000008855	RTCA	100	72.119	Ailuropoda_melanoleuca
ENSAPEG00000006945	rtca	99	93.132	ENSACIG00000019643	rtca	100	93.132	Amphilophus_citrinellus
ENSAPEG00000006945	rtca	100	99.727	ENSAOCG00000014979	rtca	100	99.727	Amphiprion_ocellaris
ENSAPEG00000006945	rtca	95	93.696	ENSATEG00000006315	rtca	96	93.696	Anabas_testudineus
ENSAPEG00000006945	rtca	95	67.422	ENSAPLG00000015430	RTCA	100	67.422	Anas_platyrhynchos
ENSAPEG00000006945	rtca	99	71.038	ENSANAG00000025446	RTCA	100	71.038	Aotus_nancymaae
ENSAPEG00000006945	rtca	100	92.896	ENSACLG00000020770	rtca	100	92.896	Astatotilapia_calliptera
ENSAPEG00000006945	rtca	99	79.121	ENSAMXG00000043271	rtca	100	79.121	Astyanax_mexicanus
ENSAPEG00000006945	rtca	99	71.858	ENSBTAG00000006321	RTCA	100	71.858	Bos_taurus
ENSAPEG00000006945	rtca	99	71.038	ENSCJAG00000003398	RTCA	100	71.038	Callithrix_jacchus
ENSAPEG00000006945	rtca	99	70.765	ENSCAFG00000020010	RTCA	68	70.765	Canis_familiaris
ENSAPEG00000006945	rtca	99	70.765	ENSCAFG00020011528	RTCA	57	70.765	Canis_lupus_dingo
ENSAPEG00000006945	rtca	99	71.585	ENSCHIG00000018937	RTCA	100	71.585	Capra_hircus
ENSAPEG00000006945	rtca	99	70.492	ENSTSYG00000011305	RTCA	100	70.492	Carlito_syrichta
ENSAPEG00000006945	rtca	99	70.765	ENSCCAG00000021844	RTCA	99	71.772	Cebus_capucinus
ENSAPEG00000006945	rtca	99	68.865	ENSCATG00000019364	RTCA	100	71.197	Cercocebus_atys
ENSAPEG00000006945	rtca	86	72.468	ENSCLAG00000006125	RTCA	100	72.468	Chinchilla_lanigera
ENSAPEG00000006945	rtca	99	71.038	ENSCSAG00000001509	RTCA	100	71.038	Chlorocebus_sabaeus
ENSAPEG00000006945	rtca	99	69.672	ENSCHOG00000005211	RTCA	100	69.672	Choloepus_hoffmanni
ENSAPEG00000006945	rtca	99	68.493	ENSCPBG00000026658	RTCA	100	68.493	Chrysemys_picta_bellii
ENSAPEG00000006945	rtca	98	55.432	ENSCING00000007875	-	98	55.432	Ciona_intestinalis
ENSAPEG00000006945	rtca	98	54.875	ENSCSAVG00000007269	-	98	54.875	Ciona_savignyi
ENSAPEG00000006945	rtca	99	70.765	ENSCANG00000040106	RTCA	100	70.765	Colobus_angolensis_palliatus
ENSAPEG00000006945	rtca	73	71.375	ENSCGRG00001013163	Rtca	85	71.375	Cricetulus_griseus_chok1gshd
ENSAPEG00000006945	rtca	98	85.754	ENSCSEG00000000530	rtca	96	85.754	Cynoglossus_semilaevis
ENSAPEG00000006945	rtca	99	73.770	ENSCVAG00000021809	rtca	100	73.770	Cyprinodon_variegatus
ENSAPEG00000006945	rtca	99	78.846	ENSDARG00000002215	rtca	100	78.846	Danio_rerio
ENSAPEG00000006945	rtca	99	71.858	ENSDNOG00000000456	RTCA	100	71.858	Dasypus_novemcinctus
ENSAPEG00000006945	rtca	99	70.765	ENSDORG00000005448	Rtca	100	70.765	Dipodomys_ordii
ENSAPEG00000006945	rtca	97	39.776	FBgn0025630	Rtca	98	39.776	Drosophila_melanogaster
ENSAPEG00000006945	rtca	93	51.744	ENSEBUG00000008556	rtca	95	51.744	Eptatretus_burgeri
ENSAPEG00000006945	rtca	99	71.311	ENSEASG00005015926	RTCA	100	71.311	Equus_asinus_asinus
ENSAPEG00000006945	rtca	99	71.311	ENSECAG00000019831	RTCA	100	71.311	Equus_caballus
ENSAPEG00000006945	rtca	91	63.873	ENSEEUG00000001165	RTCA	100	63.873	Erinaceus_europaeus
ENSAPEG00000006945	rtca	99	77.624	ENSELUG00000003741	rtca	99	77.624	Esox_lucius
ENSAPEG00000006945	rtca	99	71.311	ENSFCAG00000024460	RTCA	100	71.311	Felis_catus
ENSAPEG00000006945	rtca	92	68.047	ENSFALG00000002443	RTCA	91	68.047	Ficedula_albicollis
ENSAPEG00000006945	rtca	99	70.219	ENSFDAG00000012070	-	100	70.219	Fukomys_damarensis
ENSAPEG00000006945	rtca	98	57.735	ENSFDAG00000016084	-	100	57.735	Fukomys_damarensis
ENSAPEG00000006945	rtca	70	76.265	ENSFHEG00000002868	rtca	91	85.446	Fundulus_heteroclitus
ENSAPEG00000006945	rtca	99	78.846	ENSGMOG00000013264	rtca	100	78.846	Gadus_morhua
ENSAPEG00000006945	rtca	99	67.945	ENSGALG00000005277	RTCA	100	67.945	Gallus_gallus
ENSAPEG00000006945	rtca	100	90.437	ENSGAFG00000011853	rtca	100	90.437	Gambusia_affinis
ENSAPEG00000006945	rtca	99	86.813	ENSGACG00000013497	rtca	100	86.813	Gasterosteus_aculeatus
ENSAPEG00000006945	rtca	80	68.601	ENSGAGG00000023306	RTCA	100	68.601	Gopherus_agassizii
ENSAPEG00000006945	rtca	99	69.945	ENSGGOG00000044018	-	100	69.945	Gorilla_gorilla
ENSAPEG00000006945	rtca	99	70.492	ENSGGOG00000009546	-	100	70.492	Gorilla_gorilla
ENSAPEG00000006945	rtca	100	92.623	ENSHBUG00000002114	rtca	100	92.623	Haplochromis_burtoni
ENSAPEG00000006945	rtca	99	70.765	ENSHGLG00000002617	RTCA	100	70.765	Heterocephalus_glaber_female
ENSAPEG00000006945	rtca	99	70.765	ENSHGLG00100006056	RTCA	100	70.765	Heterocephalus_glaber_male
ENSAPEG00000006945	rtca	99	78.082	ENSHCOG00000020628	rtca	90	78.082	Hippocampus_comes
ENSAPEG00000006945	rtca	99	79.121	ENSIPUG00000024803	rtca	100	79.121	Ictalurus_punctatus
ENSAPEG00000006945	rtca	99	62.568	ENSSTOG00000033099	-	100	62.568	Ictidomys_tridecemlineatus
ENSAPEG00000006945	rtca	99	66.393	ENSSTOG00000013528	-	100	66.393	Ictidomys_tridecemlineatus
ENSAPEG00000006945	rtca	99	50.959	ENSJJAG00000016178	Rtca	100	50.959	Jaculus_jaculus
ENSAPEG00000006945	rtca	100	90.437	ENSKMAG00000006651	rtca	100	90.437	Kryptolebias_marmoratus
ENSAPEG00000006945	rtca	99	86.981	ENSLBEG00000028971	rtca	99	86.981	Labrus_bergylta
ENSAPEG00000006945	rtca	87	86.207	ENSLBEG00000002448	-	99	86.207	Labrus_bergylta
ENSAPEG00000006945	rtca	99	67.397	ENSLACG00000013666	RTCA	100	67.397	Latimeria_chalumnae
ENSAPEG00000006945	rtca	99	74.795	ENSLOCG00000000093	rtca	99	74.795	Lepisosteus_oculatus
ENSAPEG00000006945	rtca	99	70.492	ENSLAFG00000001473	RTCA	100	70.492	Loxodonta_africana
ENSAPEG00000006945	rtca	99	71.038	ENSMFAG00000034132	RTCA	100	71.038	Macaca_fascicularis
ENSAPEG00000006945	rtca	99	71.038	ENSMMUG00000019105	RTCA	100	71.038	Macaca_mulatta
ENSAPEG00000006945	rtca	84	70.874	ENSMNEG00000037163	RTCA	100	70.874	Macaca_nemestrina
ENSAPEG00000006945	rtca	99	58.470	ENSMLEG00000042151	RTCA	100	58.470	Mandrillus_leucophaeus
ENSAPEG00000006945	rtca	99	94.780	ENSMAMG00000016536	rtca	100	94.780	Mastacembelus_armatus
ENSAPEG00000006945	rtca	100	92.896	ENSMZEG00005017945	rtca	100	92.896	Maylandia_zebra
ENSAPEG00000006945	rtca	87	68.553	ENSMGAG00000006892	RTCA	99	68.553	Meleagris_gallopavo
ENSAPEG00000006945	rtca	99	71.311	ENSMAUG00000008488	Rtca	100	71.311	Mesocricetus_auratus
ENSAPEG00000006945	rtca	84	71.521	ENSMICG00000008643	RTCA	100	71.521	Microcebus_murinus
ENSAPEG00000006945	rtca	99	69.945	ENSMOCG00000016660	Rtca	100	69.945	Microtus_ochrogaster
ENSAPEG00000006945	rtca	84	90.554	ENSMMOG00000007750	rtca	100	90.554	Mola_mola
ENSAPEG00000006945	rtca	99	70.219	ENSMODG00000003557	RTCA	100	70.219	Monodelphis_domestica
ENSAPEG00000006945	rtca	99	93.681	ENSMALG00000020844	rtca	100	93.681	Monopterus_albus
ENSAPEG00000006945	rtca	99	69.945	MGP_CAROLIEiJ_G0025565	Rtca	100	69.945	Mus_caroli
ENSAPEG00000006945	rtca	99	70.219	ENSMUSG00000000339	Rtca	100	70.219	Mus_musculus
ENSAPEG00000006945	rtca	99	69.945	MGP_PahariEiJ_G0027011	Rtca	100	69.945	Mus_pahari
ENSAPEG00000006945	rtca	99	69.945	MGP_SPRETEiJ_G0026515	Rtca	100	69.945	Mus_spretus
ENSAPEG00000006945	rtca	99	71.311	ENSMPUG00000012119	RTCA	100	71.311	Mustela_putorius_furo
ENSAPEG00000006945	rtca	99	68.665	ENSMLUG00000009922	RTCA	100	68.665	Myotis_lucifugus
ENSAPEG00000006945	rtca	99	70.492	ENSNGAG00000011540	Rtca	99	70.492	Nannospalax_galili
ENSAPEG00000006945	rtca	100	92.623	ENSNBRG00000003062	rtca	100	92.623	Neolamprologus_brichardi
ENSAPEG00000006945	rtca	99	70.765	ENSNLEG00000031426	RTCA	100	70.765	Nomascus_leucogenys
ENSAPEG00000006945	rtca	73	68.401	ENSOPRG00000012092	RTCA	71	68.401	Ochotona_princeps
ENSAPEG00000006945	rtca	95	71.839	ENSODEG00000006990	RTCA	96	72.080	Octodon_degus
ENSAPEG00000006945	rtca	100	92.350	ENSONIG00000007753	rtca	100	92.350	Oreochromis_niloticus
ENSAPEG00000006945	rtca	86	71.609	ENSOANG00000012055	RTCA	98	71.609	Ornithorhynchus_anatinus
ENSAPEG00000006945	rtca	99	71.038	ENSOCUG00000014247	RTCA	100	71.038	Oryctolagus_cuniculus
ENSAPEG00000006945	rtca	99	90.110	ENSORLG00000013605	rtca	100	90.110	Oryzias_latipes
ENSAPEG00000006945	rtca	99	89.835	ENSORLG00020001904	rtca	100	89.835	Oryzias_latipes_hni
ENSAPEG00000006945	rtca	99	89.560	ENSORLG00015021064	rtca	100	89.560	Oryzias_latipes_hsok
ENSAPEG00000006945	rtca	99	89.560	ENSOMEG00000000756	rtca	100	89.560	Oryzias_melastigma
ENSAPEG00000006945	rtca	99	64.481	ENSOGAG00000005627	RTCA	100	64.481	Otolemur_garnettii
ENSAPEG00000006945	rtca	86	72.013	ENSOARG00000018122	RTCA	100	72.013	Ovis_aries
ENSAPEG00000006945	rtca	99	68.074	ENSPPAG00000035119	RTCA	100	70.227	Pan_paniscus
ENSAPEG00000006945	rtca	99	71.585	ENSPPRG00000000350	RTCA	100	71.585	Panthera_pardus
ENSAPEG00000006945	rtca	99	71.585	ENSPTIG00000012816	RTCA	100	71.585	Panthera_tigris_altaica
ENSAPEG00000006945	rtca	99	68.074	ENSPTRG00000001004	RTCA	100	70.227	Pan_troglodytes
ENSAPEG00000006945	rtca	99	71.038	ENSPANG00000000346	RTCA	100	71.038	Papio_anubis
ENSAPEG00000006945	rtca	99	79.945	ENSPKIG00000001653	rtca	100	79.945	Paramormyrops_kingsleyae
ENSAPEG00000006945	rtca	99	68.493	ENSPSIG00000011408	RTCA	100	68.493	Pelodiscus_sinensis
ENSAPEG00000006945	rtca	99	70.492	ENSPEMG00000018582	Rtca	100	70.492	Peromyscus_maniculatus_bairdii
ENSAPEG00000006945	rtca	98	57.064	ENSPMAG00000009110	rtca	98	57.064	Petromyzon_marinus
ENSAPEG00000006945	rtca	99	70.492	ENSPCIG00000007684	RTCA	100	70.492	Phascolarctos_cinereus
ENSAPEG00000006945	rtca	99	91.507	ENSPFOG00000004824	rtca	100	91.507	Poecilia_formosa
ENSAPEG00000006945	rtca	100	91.530	ENSPLAG00000011753	rtca	100	91.530	Poecilia_latipinna
ENSAPEG00000006945	rtca	100	91.530	ENSPMEG00000020469	rtca	100	91.530	Poecilia_mexicana
ENSAPEG00000006945	rtca	100	90.984	ENSPREG00000001365	rtca	100	90.984	Poecilia_reticulata
ENSAPEG00000006945	rtca	99	71.038	ENSPPYG00000001115	RTCA	100	71.038	Pongo_abelii
ENSAPEG00000006945	rtca	99	69.126	ENSPCAG00000005076	RTCA	100	69.126	Procavia_capensis
ENSAPEG00000006945	rtca	99	71.038	ENSPCOG00000005603	RTCA	100	71.038	Propithecus_coquereli
ENSAPEG00000006945	rtca	99	67.018	ENSPVAG00000009478	RTCA	100	67.018	Pteropus_vampyrus
ENSAPEG00000006945	rtca	100	92.896	ENSPNYG00000004722	rtca	100	92.896	Pundamilia_nyererei
ENSAPEG00000006945	rtca	99	79.945	ENSPNAG00000022270	rtca	100	79.945	Pygocentrus_nattereri
ENSAPEG00000006945	rtca	99	69.672	ENSRNOG00000014575	Rtca	100	69.672	Rattus_norvegicus
ENSAPEG00000006945	rtca	99	68.338	ENSRBIG00000041180	RTCA	100	70.550	Rhinopithecus_bieti
ENSAPEG00000006945	rtca	99	70.765	ENSRROG00000024929	RTCA	100	70.765	Rhinopithecus_roxellana
ENSAPEG00000006945	rtca	99	70.219	ENSSBOG00000028626	RTCA	100	70.219	Saimiri_boliviensis_boliviensis
ENSAPEG00000006945	rtca	99	70.765	ENSSHAG00000001758	RTCA	100	70.765	Sarcophilus_harrisii
ENSAPEG00000006945	rtca	99	87.535	ENSSMAG00000014680	rtca	98	87.535	Scophthalmus_maximus
ENSAPEG00000006945	rtca	98	92.458	ENSSDUG00000015585	rtca	98	91.989	Seriola_dumerili
ENSAPEG00000006945	rtca	95	92.550	ENSSLDG00000018985	rtca	95	92.550	Seriola_lalandi_dorsalis
ENSAPEG00000006945	rtca	86	66.562	ENSSARG00000013993	RTCA	100	66.562	Sorex_araneus
ENSAPEG00000006945	rtca	100	94.262	ENSSPAG00000011938	rtca	100	94.262	Stegastes_partitus
ENSAPEG00000006945	rtca	99	71.585	ENSSSCG00000006865	RTCA	100	71.585	Sus_scrofa
ENSAPEG00000006945	rtca	99	68.767	ENSTGUG00000005154	RTCA	100	68.767	Taeniopygia_guttata
ENSAPEG00000006945	rtca	99	89.286	ENSTRUG00000008799	rtca	100	89.286	Takifugu_rubripes
ENSAPEG00000006945	rtca	99	87.088	ENSTNIG00000004725	rtca	100	87.088	Tetraodon_nigroviridis
ENSAPEG00000006945	rtca	57	59.048	ENSTBEG00000000943	RTCA	59	59.048	Tupaia_belangeri
ENSAPEG00000006945	rtca	99	69.129	ENSTTRG00000015327	RTCA	100	69.129	Tursiops_truncatus
ENSAPEG00000006945	rtca	95	69.828	ENSUAMG00000017265	RTCA	98	69.828	Ursus_americanus
ENSAPEG00000006945	rtca	99	70.765	ENSUMAG00000007881	RTCA	100	70.765	Ursus_maritimus
ENSAPEG00000006945	rtca	86	63.722	ENSVPAG00000001039	RTCA	84	63.722	Vicugna_pacos
ENSAPEG00000006945	rtca	99	70.765	ENSVVUG00000022041	RTCA	68	70.765	Vulpes_vulpes
ENSAPEG00000006945	rtca	99	57.221	ENSXETG00000031661	RTCA	99	57.221	Xenopus_tropicalis
ENSAPEG00000006945	rtca	99	78.846	ENSXCOG00000008002	rtca	100	78.846	Xiphophorus_couchianus
ENSAPEG00000006945	rtca	100	90.710	ENSXMAG00000005482	rtca	100	90.710	Xiphophorus_maculatus