EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000006963 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 1a
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Plus strand
Length
6291 bases
Position
chr7:4591464-4597754
Accession
ZDB-GENE-030131-3238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000009741PABPPF00658.187.1e-3211
ENSAPEP00000009770PABPPF00658.181.2e-3111
ENSAPEP00000009741RRM_5PF13893.65e-0812
ENSAPEP00000009741RRM_5PF13893.65e-0822
ENSAPEP00000009741RRM_1PF00076.229.9e-9314
ENSAPEP00000009741RRM_1PF00076.229.9e-9324
ENSAPEP00000009741RRM_1PF00076.229.9e-9334
ENSAPEP00000009741RRM_1PF00076.229.9e-9344
ENSAPEP00000009770RRM_1PF00076.221.7e-7614
ENSAPEP00000009770RRM_1PF00076.221.7e-7624
ENSAPEP00000009770RRM_1PF00076.221.7e-7634
ENSAPEP00000009770RRM_1PF00076.221.7e-7644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000010036-1815-ENSAPEP00000009770604 (aa)--
ENSAPET00000010007-3296-ENSAPEP00000009741635 (aa)-UPI000C316DC6
Gene Model
Click here to download ENSAPEG00000006963's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006963's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000006963pabpc1a5933.684ENSAPEG00000003556rbms2b5133.684
ENSAPEG00000006963pabpc1a5530.579ENSAPEG00000003200tia1l8630.579
ENSAPEG00000006963pabpc1a5936.145ENSAPEG00000022826elavl48336.145
ENSAPEG00000006963pabpc1a5937.349ENSAPEG00000011145elavl39037.349
ENSAPEG00000006963pabpc1a9876.433ENSAPEG00000019196pabpc410075.351
ENSAPEG00000006963pabpc1a10090.282ENSAPEG00000010435pabpc1b10090.125
ENSAPEG00000006963pabpc1a5737.333ENSAPEG00000022381rbm197537.333
ENSAPEG00000006963pabpc1a5837.349ENSAPEG00000023474ELAVL28537.349
ENSAPEG00000006963pabpc1a5534.884ENSAPEG00000017360-6134.884
ENSAPEG00000006963pabpc1a5339.759ENSAPEG00000007649celf5a5939.759
ENSAPEG00000006963pabpc1a9770.320ENSAPEG00000010558-9881.776
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000006963pabpc1a5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSAPEG00000006963pabpc1a5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSAPEG00000006963pabpc1a10090.439ENSAPOG00000017776pabpc1b10090.282Acanthochromis_polyacanthus
ENSAPEG00000006963pabpc1a10099.213ENSAPOG00000015105pabpc1a10099.213Acanthochromis_polyacanthus
ENSAPEG00000006963pabpc1a5880.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSAPEG00000006963pabpc1a10098.740ENSACIG00000004685pabpc1a10098.740Amphilophus_citrinellus
ENSAPEG00000006963pabpc1a10086.228ENSACIG00000018366pabpc1b10083.537Amphilophus_citrinellus
ENSAPEG00000006963pabpc1a10090.282ENSAOCG00000019839pabpc1b10090.125Amphiprion_ocellaris
ENSAPEG00000006963pabpc1a100100.000ENSAOCG00000011656pabpc1a100100.000Amphiprion_ocellaris
ENSAPEG00000006963pabpc1a10098.740ENSATEG00000024852pabpc1a10098.740Anabas_testudineus
ENSAPEG00000006963pabpc1a10089.358ENSATEG00000012917pabpc1b10089.358Anabas_testudineus
ENSAPEG00000006963pabpc1a5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSAPEG00000006963pabpc1a5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSAPEG00000006963pabpc1a10089.028ENSACLG00000014335pabpc1b10088.871Astatotilapia_calliptera
ENSAPEG00000006963pabpc1a10098.268ENSACLG00000009399pabpc1a10098.268Astatotilapia_calliptera
ENSAPEG00000006963pabpc1a10090.596ENSAMXG00000008599pabpc1b10090.439Astyanax_mexicanus
ENSAPEG00000006963pabpc1a5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSAPEG00000006963pabpc1a5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSAPEG00000006963pabpc1a5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSAPEG00000006963pabpc1a5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSAPEG00000006963pabpc1a5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSAPEG00000006963pabpc1a5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSAPEG00000006963pabpc1a5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSAPEG00000006963pabpc1a5880.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSAPEG00000006963pabpc1a5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSAPEG00000006963pabpc1a5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSAPEG00000006963pabpc1a5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSAPEG00000006963pabpc1a5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSAPEG00000006963pabpc1a5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSAPEG00000006963pabpc1a5880.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSAPEG00000006963pabpc1a5780.110ENSCGRG00001023387-9677.835Cricetulus_griseus_chok1gshd
ENSAPEG00000006963pabpc1a10088.558ENSCSEG00000015241-10088.558Cynoglossus_semilaevis
ENSAPEG00000006963pabpc1a9998.101ENSCSEG00000013324pabpc1a10098.101Cynoglossus_semilaevis
ENSAPEG00000006963pabpc1a10098.268ENSCVAG00000021872pabpc1a10098.268Cyprinodon_variegatus
ENSAPEG00000006963pabpc1a10087.950ENSCVAG00000005489pabpc1b10087.793Cyprinodon_variegatus
ENSAPEG00000006963pabpc1a10091.693ENSDARG00000017219pabpc1a10091.693Danio_rerio
ENSAPEG00000006963pabpc1a10089.342ENSDARG00000021140pabpc1b9997.692Danio_rerio
ENSAPEG00000006963pabpc1a5880.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSAPEG00000006963pabpc1a5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSAPEG00000006963pabpc1a5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSAPEG00000006963pabpc1a5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSAPEG00000006963pabpc1a5976.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSAPEG00000006963pabpc1a9994.497ENSELUG00000003614pabpc1a10094.497Esox_lucius
ENSAPEG00000006963pabpc1a10088.906ENSELUG00000015062-10088.750Esox_lucius
ENSAPEG00000006963pabpc1a5958.621ENSELUG00000005389-9758.621Esox_lucius
ENSAPEG00000006963pabpc1a5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSAPEG00000006963pabpc1a5880.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSAPEG00000006963pabpc1a10098.110ENSFHEG00000018979pabpc1a10098.110Fundulus_heteroclitus
ENSAPEG00000006963pabpc1a10089.185ENSFHEG00000008186pabpc1b10089.342Fundulus_heteroclitus
ENSAPEG00000006963pabpc1a9993.818ENSGMOG00000013448pabpc1a9993.663Gadus_morhua
ENSAPEG00000006963pabpc1a10080.930ENSGMOG00000002448-10079.755Gadus_morhua
ENSAPEG00000006963pabpc1a10090.125ENSGAFG00000010193pabpc1b10090.282Gambusia_affinis
ENSAPEG00000006963pabpc1a10097.795ENSGAFG00000019750pabpc1a10097.795Gambusia_affinis
ENSAPEG00000006963pabpc1a10088.527ENSGACG00000003771pabpc1b10088.527Gasterosteus_aculeatus
ENSAPEG00000006963pabpc1a10097.795ENSGACG00000003572pabpc1a10097.795Gasterosteus_aculeatus
ENSAPEG00000006963pabpc1a5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSAPEG00000006963pabpc1a5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSAPEG00000006963pabpc1a10098.268ENSHBUG00000020487pabpc1a10098.268Haplochromis_burtoni
ENSAPEG00000006963pabpc1a10089.028ENSHBUG00000002075pabpc1b10088.871Haplochromis_burtoni
ENSAPEG00000006963pabpc1a5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSAPEG00000006963pabpc1a5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSAPEG00000006963pabpc1a5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSAPEG00000006963pabpc1a10098.583ENSHCOG00000013502pabpc1a10098.583Hippocampus_comes
ENSAPEG00000006963pabpc1a9869.600ENSHCOG00000003175pabpc1b9969.280Hippocampus_comes
ENSAPEG00000006963pabpc1a8156.716ENSIPUG00000018724-7956.716Ictalurus_punctatus
ENSAPEG00000006963pabpc1a7555.301ENSIPUG00000021244-6555.301Ictalurus_punctatus
ENSAPEG00000006963pabpc1a10084.615ENSIPUG00000010791-10084.458Ictalurus_punctatus
ENSAPEG00000006963pabpc1a10090.551ENSIPUG00000008848pabpc1a10090.551Ictalurus_punctatus
ENSAPEG00000006963pabpc1a5879.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSAPEG00000006963pabpc1a5879.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSAPEG00000006963pabpc1a5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSAPEG00000006963pabpc1a10088.679ENSKMAG00000008049pabpc1b10088.836Kryptolebias_marmoratus
ENSAPEG00000006963pabpc1a10098.583ENSKMAG00000000605pabpc1a10098.583Kryptolebias_marmoratus
ENSAPEG00000006963pabpc1a10097.795ENSLBEG00000024002-10097.795Labrus_bergylta
ENSAPEG00000006963pabpc1a10089.498ENSLBEG00000026845pabpc1b10089.168Labrus_bergylta
ENSAPEG00000006963pabpc1a5878.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSAPEG00000006963pabpc1a5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSAPEG00000006963pabpc1a5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSAPEG00000006963pabpc1a5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSAPEG00000006963pabpc1a5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSAPEG00000006963pabpc1a5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSAPEG00000006963pabpc1a5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSAPEG00000006963pabpc1a10089.812ENSMAMG00000014610pabpc1b10089.969Mastacembelus_armatus
ENSAPEG00000006963pabpc1a10098.425ENSMAMG00000004502-10098.425Mastacembelus_armatus
ENSAPEG00000006963pabpc1a10098.268ENSMZEG00005025416pabpc1a10098.268Maylandia_zebra
ENSAPEG00000006963pabpc1a10089.028ENSMZEG00005026745pabpc1b10088.871Maylandia_zebra
ENSAPEG00000006963pabpc1a5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSAPEG00000006963pabpc1a10096.562ENSMMOG00000018044pabpc1a10096.562Mola_mola
ENSAPEG00000006963pabpc1a10084.615ENSMMOG00000018009pabpc1b10084.615Mola_mola
ENSAPEG00000006963pabpc1a9873.003ENSMODG00000013156-9873.163Monodelphis_domestica
ENSAPEG00000006963pabpc1a9966.197ENSMODG00000015024-9965.831Monodelphis_domestica
ENSAPEG00000006963pabpc1a10098.268ENSMALG00000013020-10098.268Monopterus_albus
ENSAPEG00000006963pabpc1a10083.359ENSMALG00000006066pabpc1b10085.243Monopterus_albus
ENSAPEG00000006963pabpc1a5881.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSAPEG00000006963pabpc1a10098.110ENSNBRG00000003068-10098.110Neolamprologus_brichardi
ENSAPEG00000006963pabpc1a10089.028ENSNBRG00000013737pabpc1b10088.871Neolamprologus_brichardi
ENSAPEG00000006963pabpc1a5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSAPEG00000006963pabpc1a5879.592ENSODEG00000018540-9879.592Octodon_degus
ENSAPEG00000006963pabpc1a10097.480ENSONIG00000006871-10097.480Oreochromis_niloticus
ENSAPEG00000006963pabpc1a10089.185ENSONIG00000002717pabpc1b10089.028Oreochromis_niloticus
ENSAPEG00000006963pabpc1a5880.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSAPEG00000006963pabpc1a9999.048ENSORLG00000002691pabpc1a10097.480Oryzias_latipes
ENSAPEG00000006963pabpc1a10084.615ENSORLG00000003008-10084.301Oryzias_latipes
ENSAPEG00000006963pabpc1a10097.638ENSORLG00020022398pabpc1a10097.638Oryzias_latipes_hni
ENSAPEG00000006963pabpc1a10084.458ENSORLG00020022259-10084.144Oryzias_latipes_hni
ENSAPEG00000006963pabpc1a10084.929ENSORLG00015010932-10084.615Oryzias_latipes_hsok
ENSAPEG00000006963pabpc1a10097.480ENSORLG00015013633pabpc110097.480Oryzias_latipes_hsok
ENSAPEG00000006963pabpc1a10098.110ENSOMEG00000020219pabpc1a10098.110Oryzias_melastigma
ENSAPEG00000006963pabpc1a9981.465ENSOMEG00000013627pabpc1b10081.465Oryzias_melastigma
ENSAPEG00000006963pabpc1a5880.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSAPEG00000006963pabpc1a5880.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSAPEG00000006963pabpc1a5880.102ENSOARG00000005943-9880.102Ovis_aries
ENSAPEG00000006963pabpc1a5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSAPEG00000006963pabpc1a5880.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSAPEG00000006963pabpc1a5880.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSAPEG00000006963pabpc1a5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSAPEG00000006963pabpc1a5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSAPEG00000006963pabpc1a10090.125ENSPKIG00000005676pabpc1b10090.125Paramormyrops_kingsleyae
ENSAPEG00000006963pabpc1a7098.202ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSAPEG00000006963pabpc1a7092.152ENSPMGG00000023134-9792.152Periophthalmus_magnuspinnatus
ENSAPEG00000006963pabpc1a9971.949ENSPCIG00000016995-5571.930Phascolarctos_cinereus
ENSAPEG00000006963pabpc1a10088.715ENSPFOG00000005917pabpc1b10089.812Poecilia_formosa
ENSAPEG00000006963pabpc1a10097.063ENSPFOG00000010815pabpc1a10097.063Poecilia_formosa
ENSAPEG00000006963pabpc1a10099.055ENSPLAG00000004114pabpc1a10099.055Poecilia_latipinna
ENSAPEG00000006963pabpc1a10089.028ENSPLAG00000001388pabpc1b10090.125Poecilia_latipinna
ENSAPEG00000006963pabpc1a10099.055ENSPMEG00000001334pabpc1a10099.055Poecilia_mexicana
ENSAPEG00000006963pabpc1a10088.715ENSPMEG00000014399pabpc1b10089.812Poecilia_mexicana
ENSAPEG00000006963pabpc1a10095.788ENSPREG00000019595pabpc1a10096.101Poecilia_reticulata
ENSAPEG00000006963pabpc1a10089.028ENSPREG00000010911pabpc1b10090.125Poecilia_reticulata
ENSAPEG00000006963pabpc1a5880.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSAPEG00000006963pabpc1a5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSAPEG00000006963pabpc1a5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSAPEG00000006963pabpc1a5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSAPEG00000006963pabpc1a10089.028ENSPNYG00000012578pabpc1b10088.871Pundamilia_nyererei
ENSAPEG00000006963pabpc1a10098.268ENSPNYG00000005192pabpc1a10098.268Pundamilia_nyererei
ENSAPEG00000006963pabpc1a10091.052ENSPNAG00000028408pabpc1a10090.738Pygocentrus_nattereri
ENSAPEG00000006963pabpc1a10089.969ENSPNAG00000024626pabpc1b10089.812Pygocentrus_nattereri
ENSAPEG00000006963pabpc1a5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSAPEG00000006963pabpc1a9989.671ENSRBIG00000028738-9589.671Rhinopithecus_bieti
ENSAPEG00000006963pabpc1a5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSAPEG00000006963pabpc1a9863.942ENSSHAG00000000511-10063.622Sarcophilus_harrisii
ENSAPEG00000006963pabpc1a6978.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSAPEG00000006963pabpc1a10089.796ENSSFOG00015006662pabpc1a10089.796Scleropages_formosus
ENSAPEG00000006963pabpc1a10090.267ENSSFOG00015002752-10090.110Scleropages_formosus
ENSAPEG00000006963pabpc1a10098.268ENSSMAG00000010803pabpc1a10098.268Scophthalmus_maximus
ENSAPEG00000006963pabpc1a10088.715ENSSMAG00000006869pabpc1b10088.558Scophthalmus_maximus
ENSAPEG00000006963pabpc1a10098.425ENSSDUG00000006675pabpc1a10098.425Seriola_dumerili
ENSAPEG00000006963pabpc1a10088.245ENSSDUG00000011965pabpc1b10087.912Seriola_dumerili
ENSAPEG00000006963pabpc1a10098.425ENSSLDG00000011661pabpc1a10098.425Seriola_lalandi_dorsalis
ENSAPEG00000006963pabpc1a10089.891ENSSLDG00000014156pabpc1b10089.564Seriola_lalandi_dorsalis
ENSAPEG00000006963pabpc1a10090.439ENSSPAG00000019265pabpc1b10090.110Stegastes_partitus
ENSAPEG00000006963pabpc1a10099.370ENSSPAG00000014453-10099.370Stegastes_partitus
ENSAPEG00000006963pabpc1a5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSAPEG00000006963pabpc1a5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSAPEG00000006963pabpc1a10095.440ENSTRUG00000011577-10095.912Takifugu_rubripes
ENSAPEG00000006963pabpc1a10086.385ENSTRUG00000003767-10086.385Takifugu_rubripes
ENSAPEG00000006963pabpc1a10092.713ENSTNIG00000013307pabpc1a10093.178Tetraodon_nigroviridis
ENSAPEG00000006963pabpc1a10086.916ENSTNIG00000009153pabpc1b10086.293Tetraodon_nigroviridis
ENSAPEG00000006963pabpc1a5880.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSAPEG00000006963pabpc1a5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSAPEG00000006963pabpc1a5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSAPEG00000006963pabpc1a9754.369ENSUMAG00000023926-8970.166Ursus_maritimus
ENSAPEG00000006963pabpc1a5879.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSAPEG00000006963pabpc1a9745.455ENSXETG00000015439-9746.047Xenopus_tropicalis
ENSAPEG00000006963pabpc1a10085.737ENSXCOG00000019901pabpc1b10085.737Xiphophorus_couchianus
ENSAPEG00000006963pabpc1a10092.126ENSXCOG00000017066pabpc1a10092.126Xiphophorus_couchianus
ENSAPEG00000006963pabpc1a10098.110ENSXMAG00000002555pabpc1a10098.110Xiphophorus_maculatus
ENSAPEG00000006963pabpc1a10089.185ENSXMAG00000003753pabpc1b10090.282Xiphophorus_maculatus

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