EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000006979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 6451 bases
Position: chr14:12962642-12969092
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000009697	zf-C2H2	PF00096.26	3.5e-17	1	4
ENSAPEP00000009697	zf-C2H2	PF00096.26	3.5e-17	2	4
ENSAPEP00000009697	zf-C2H2	PF00096.26	3.5e-17	3	4
ENSAPEP00000009697	zf-C2H2	PF00096.26	3.5e-17	4	4
ENSAPEP00000009704	zf-C2H2	PF00096.26	1.6e-16	1	4
ENSAPEP00000009704	zf-C2H2	PF00096.26	1.6e-16	2	4
ENSAPEP00000009704	zf-C2H2	PF00096.26	1.6e-16	3	4
ENSAPEP00000009704	zf-C2H2	PF00096.26	1.6e-16	4	4
ENSAPEP00000009697	zf-met	PF12874.7	1.4e-06	1	2
ENSAPEP00000009697	zf-met	PF12874.7	1.4e-06	2	2
ENSAPEP00000009704	zf-met	PF12874.7	5.6e-06	1	2
ENSAPEP00000009704	zf-met	PF12874.7	5.6e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000009961	-	5446	-	ENSAPEP00000009697	356 (aa)	-	-
ENSAPET00000009969	-	5361	-	ENSAPEP00000009704	464 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000006979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000006979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000006979	-	55	45.122	ENSAPEG00000016483	-	57	45.122
ENSAPEG00000006979	-	61	43.478	ENSAPEG00000012243	-	65	43.478
ENSAPEG00000006979	-	62	42.857	ENSAPEG00000008020	-	99	42.857
ENSAPEG00000006979	-	69	32.090	ENSAPEG00000011635	-	75	38.406
ENSAPEG00000006979	-	64	30.657	ENSAPEG00000018271	-	71	44.595
ENSAPEG00000006979	-	81	45.679	ENSAPEG00000009515	-	82	44.186
ENSAPEG00000006979	-	53	38.889	ENSAPEG00000017116	-	61	37.838
ENSAPEG00000006979	-	67	32.157	ENSAPEG00000011646	-	60	35.784
ENSAPEG00000006979	-	70	48.333	ENSAPEG00000010602	-	88	48.333
ENSAPEG00000006979	-	65	37.313	ENSAPEG00000006650	-	97	37.879
ENSAPEG00000006979	-	66	36.782	ENSAPEG00000012963	-	67	40.000
ENSAPEG00000006979	-	75	39.375	ENSAPEG00000009190	-	77	46.479
ENSAPEG00000006979	-	78	40.690	ENSAPEG00000013550	-	94	50.000
ENSAPEG00000006979	-	67	35.606	ENSAPEG00000004486	-	93	46.429
ENSAPEG00000006979	-	52	44.444	ENSAPEG00000000208	ZNF319	62	44.444
ENSAPEG00000006979	-	51	41.667	ENSAPEG00000010438	-	95	62.264
ENSAPEG00000006979	-	69	36.066	ENSAPEG00000006584	-	62	36.066
ENSAPEG00000006979	-	66	46.591	ENSAPEG00000016118	-	93	50.000
ENSAPEG00000006979	-	69	37.162	ENSAPEG00000011020	-	97	42.236
ENSAPEG00000006979	-	68	37.719	ENSAPEG00000007389	-	91	40.000
ENSAPEG00000006979	-	61	35.955	ENSAPEG00000005566	-	54	35.955
ENSAPEG00000006979	-	67	39.865	ENSAPEG00000012926	-	80	42.400
ENSAPEG00000006979	-	71	37.600	ENSAPEG00000004189	-	72	37.600
ENSAPEG00000006979	-	60	38.571	ENSAPEG00000010478	-	62	38.571
ENSAPEG00000006979	-	53	37.013	ENSAPEG00000005462	-	83	37.838
ENSAPEG00000006979	-	51	38.571	ENSAPEG00000013044	-	64	38.571
ENSAPEG00000006979	-	54	40.299	ENSAPEG00000016196	gfi1b	70	40.299
ENSAPEG00000006979	-	78	39.706	ENSAPEG00000007141	-	55	39.706
ENSAPEG00000006979	-	71	39.865	ENSAPEG00000013031	-	86	42.683
ENSAPEG00000006979	-	77	48.148	ENSAPEG00000001546	-	85	49.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000006979	-	100	95.699	ENSAPOG00000023496	-	100	95.054	Acanthochromis_polyacanthus
ENSAPEG00000006979	-	100	98.498	ENSAOCG00000000156	-	100	98.498	Amphiprion_ocellaris
ENSAPEG00000006979	-	96	64.097	ENSPREG00000004905	-	97	64.758	Poecilia_reticulata