EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000007067 (Gene tree)
Gene ID: -
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 211099 bases
Position: chr21:15858503-16069601
Accession: ZDB-GENE-030131-3124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000009957	TUDOR	PF00567.24	8.4e-26	1	1
ENSAPEP00000009957	SNase	PF00565.17	2.5e-67	1	4
ENSAPEP00000009957	SNase	PF00565.17	2.5e-67	2	4
ENSAPEP00000009957	SNase	PF00565.17	2.5e-67	3	4
ENSAPEP00000009957	SNase	PF00565.17	2.5e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000010226	-	3922	-	ENSAPEP00000009957	910 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000007067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000007067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000007067	snd1	99	84.316	ENSG00000197157	SND1	100	83.443	Homo_sapiens
ENSAPEG00000007067	snd1	100	99.121	ENSAPOG00000017599	snd1	100	99.121	Acanthochromis_polyacanthus
ENSAPEG00000007067	snd1	100	83.479	ENSAMEG00000004664	SND1	94	83.479	Ailuropoda_melanoleuca
ENSAPEG00000007067	snd1	100	93.304	ENSACIG00000003551	snd1	100	93.304	Amphilophus_citrinellus
ENSAPEG00000007067	snd1	100	99.780	ENSAOCG00000014166	snd1	100	99.780	Amphiprion_ocellaris
ENSAPEG00000007067	snd1	98	96.309	ENSATEG00000018475	snd1	89	96.309	Anabas_testudineus
ENSAPEG00000007067	snd1	99	84.427	ENSANAG00000034463	SND1	99	84.650	Aotus_nancymaae
ENSAPEG00000007067	snd1	100	94.841	ENSACLG00000022897	snd1	100	94.841	Astatotilapia_calliptera
ENSAPEG00000007067	snd1	99	90.879	ENSAMXG00000016318	snd1	99	90.879	Astyanax_mexicanus
ENSAPEG00000007067	snd1	99	84.650	ENSBTAG00000010692	SND1	100	83.772	Bos_taurus
ENSAPEG00000007067	snd1	99	47.046	WBGene00006626	tsn-1	99	47.046	Caenorhabditis_elegans
ENSAPEG00000007067	snd1	99	84.427	ENSCJAG00000017668	SND1	99	84.650	Callithrix_jacchus
ENSAPEG00000007067	snd1	100	83.772	ENSCAFG00000001700	SND1	100	83.772	Canis_familiaris
ENSAPEG00000007067	snd1	100	83.772	ENSCAFG00020021639	SND1	100	83.772	Canis_lupus_dingo
ENSAPEG00000007067	snd1	99	84.538	ENSCHIG00000023390	SND1	100	83.662	Capra_hircus
ENSAPEG00000007067	snd1	70	87.193	ENSTSYG00000004979	SND1	96	87.193	Carlito_syrichta
ENSAPEG00000007067	snd1	97	74.550	ENSCAPG00000010677	SND1	97	73.913	Cavia_aperea
ENSAPEG00000007067	snd1	99	84.316	ENSCPOG00000006251	SND1	100	83.443	Cavia_porcellus
ENSAPEG00000007067	snd1	99	84.427	ENSCCAG00000036847	SND1	100	83.553	Cebus_capucinus
ENSAPEG00000007067	snd1	99	84.538	ENSCATG00000035214	SND1	99	84.763	Cercocebus_atys
ENSAPEG00000007067	snd1	99	84.538	ENSCLAG00000011796	SND1	100	83.662	Chinchilla_lanigera
ENSAPEG00000007067	snd1	99	84.538	ENSCSAG00000010182	SND1	100	83.662	Chlorocebus_sabaeus
ENSAPEG00000007067	snd1	77	78.218	ENSCHOG00000002218	SND1	86	78.218	Choloepus_hoffmanni
ENSAPEG00000007067	snd1	100	83.974	ENSCPBG00000018094	SND1	100	83.974	Chrysemys_picta_bellii
ENSAPEG00000007067	snd1	98	56.700	ENSCING00000000524	-	99	56.100	Ciona_intestinalis
ENSAPEG00000007067	snd1	99	57.314	ENSCSAVG00000008807	-	99	57.112	Ciona_savignyi
ENSAPEG00000007067	snd1	99	84.538	ENSCANG00000035119	SND1	100	83.662	Colobus_angolensis_palliatus
ENSAPEG00000007067	snd1	99	84.093	ENSCGRG00001022514	Snd1	100	83.333	Cricetulus_griseus_chok1gshd
ENSAPEG00000007067	snd1	97	84.312	ENSCGRG00000012277	Snd1	99	84.312	Cricetulus_griseus_crigri
ENSAPEG00000007067	snd1	100	94.621	ENSCSEG00000008661	snd1	100	94.621	Cynoglossus_semilaevis
ENSAPEG00000007067	snd1	100	95.609	ENSCVAG00000010316	snd1	100	95.609	Cyprinodon_variegatus
ENSAPEG00000007067	snd1	100	90.033	ENSDARG00000006766	snd1	99	91.404	Danio_rerio
ENSAPEG00000007067	snd1	97	82.790	ENSDNOG00000006795	SND1	100	82.790	Dasypus_novemcinctus
ENSAPEG00000007067	snd1	99	84.316	ENSDORG00000000336	Snd1	100	83.443	Dipodomys_ordii
ENSAPEG00000007067	snd1	98	50.596	FBgn0035121	Tudor-SN	99	50.107	Drosophila_melanogaster
ENSAPEG00000007067	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSAPEG00000007067	snd1	60	65.445	ENSEBUG00000014201	-	84	77.174	Eptatretus_burgeri
ENSAPEG00000007067	snd1	99	83.151	ENSEASG00005008513	SND1	100	82.309	Equus_asinus_asinus
ENSAPEG00000007067	snd1	99	84.316	ENSECAG00000011451	SND1	100	83.333	Equus_caballus
ENSAPEG00000007067	snd1	100	74.232	ENSEEUG00000014737	SND1	100	74.232	Erinaceus_europaeus
ENSAPEG00000007067	snd1	99	89.451	ENSELUG00000001805	snd1	96	89.451	Esox_lucius
ENSAPEG00000007067	snd1	100	83.662	ENSFCAG00000008289	SND1	100	83.662	Felis_catus
ENSAPEG00000007067	snd1	98	84.340	ENSFDAG00000015881	SND1	100	83.224	Fukomys_damarensis
ENSAPEG00000007067	snd1	100	92.911	ENSFHEG00000004093	snd1	99	94.539	Fundulus_heteroclitus
ENSAPEG00000007067	snd1	75	83.898	ENSGMOG00000018932	snd1	66	83.898	Gadus_morhua
ENSAPEG00000007067	snd1	100	96.268	ENSGAFG00000008421	snd1	100	96.268	Gambusia_affinis
ENSAPEG00000007067	snd1	100	62.690	ENSGACG00000019793	snd1	100	62.690	Gasterosteus_aculeatus
ENSAPEG00000007067	snd1	99	84.538	ENSGGOG00000009614	SND1	99	84.763	Gorilla_gorilla
ENSAPEG00000007067	snd1	100	94.841	ENSHBUG00000019135	snd1	100	94.841	Haplochromis_burtoni
ENSAPEG00000007067	snd1	99	84.093	ENSHGLG00000003618	SND1	100	83.224	Heterocephalus_glaber_female
ENSAPEG00000007067	snd1	99	84.000	ENSHGLG00100012449	SND1	99	84.000	Heterocephalus_glaber_male
ENSAPEG00000007067	snd1	100	92.975	ENSHCOG00000005266	snd1	100	92.975	Hippocampus_comes
ENSAPEG00000007067	snd1	99	89.133	ENSIPUG00000013279	snd1	99	89.133	Ictalurus_punctatus
ENSAPEG00000007067	snd1	99	84.427	ENSSTOG00000002140	SND1	100	83.553	Ictidomys_tridecemlineatus
ENSAPEG00000007067	snd1	99	84.427	ENSJJAG00000009561	Snd1	100	83.553	Jaculus_jaculus
ENSAPEG00000007067	snd1	100	96.378	ENSKMAG00000016997	snd1	100	96.378	Kryptolebias_marmoratus
ENSAPEG00000007067	snd1	100	95.630	ENSLBEG00000013563	snd1	100	94.621	Labrus_bergylta
ENSAPEG00000007067	snd1	99	88.864	ENSLOCG00000015537	snd1	99	88.139	Lepisosteus_oculatus
ENSAPEG00000007067	snd1	100	83.662	ENSLAFG00000009696	SND1	100	83.662	Loxodonta_africana
ENSAPEG00000007067	snd1	99	84.538	ENSMFAG00000038114	SND1	99	84.763	Macaca_fascicularis
ENSAPEG00000007067	snd1	99	84.538	ENSMMUG00000015432	SND1	100	83.662	Macaca_mulatta
ENSAPEG00000007067	snd1	99	84.538	ENSMNEG00000039808	SND1	100	84.780	Macaca_nemestrina
ENSAPEG00000007067	snd1	99	84.427	ENSMLEG00000029040	SND1	100	84.667	Mandrillus_leucophaeus
ENSAPEG00000007067	snd1	100	95.609	ENSMAMG00000011739	snd1	100	95.609	Mastacembelus_armatus
ENSAPEG00000007067	snd1	100	94.841	ENSMZEG00005005681	snd1	100	94.841	Maylandia_zebra
ENSAPEG00000007067	snd1	99	84.650	ENSMICG00000000097	SND1	100	83.772	Microcebus_murinus
ENSAPEG00000007067	snd1	99	84.650	ENSMOCG00000005040	Snd1	100	83.772	Microtus_ochrogaster
ENSAPEG00000007067	snd1	100	95.939	ENSMMOG00000001795	snd1	100	95.939	Mola_mola
ENSAPEG00000007067	snd1	99	83.871	ENSMODG00000015182	SND1	100	83.004	Monodelphis_domestica
ENSAPEG00000007067	snd1	100	95.719	ENSMALG00000012071	snd1	100	95.719	Monopterus_albus
ENSAPEG00000007067	snd1	98	84.452	MGP_CAROLIEiJ_G0028159	Snd1	99	85.042	Mus_caroli
ENSAPEG00000007067	snd1	98	84.228	ENSMUSG00000001424	Snd1	100	83.224	Mus_musculus
ENSAPEG00000007067	snd1	98	84.452	MGP_PahariEiJ_G0021917	Snd1	100	85.042	Mus_pahari
ENSAPEG00000007067	snd1	98	84.452	MGP_SPRETEiJ_G0029159	Snd1	100	83.443	Mus_spretus
ENSAPEG00000007067	snd1	100	83.553	ENSMPUG00000006545	SND1	100	83.114	Mustela_putorius_furo
ENSAPEG00000007067	snd1	97	83.501	ENSMLUG00000017130	SND1	99	82.832	Myotis_lucifugus
ENSAPEG00000007067	snd1	99	84.316	ENSNGAG00000011186	Snd1	100	83.443	Nannospalax_galili
ENSAPEG00000007067	snd1	100	94.841	ENSNBRG00000006681	snd1	100	94.841	Neolamprologus_brichardi
ENSAPEG00000007067	snd1	100	83.662	ENSNLEG00000012263	SND1	100	84.780	Nomascus_leucogenys
ENSAPEG00000007067	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSAPEG00000007067	snd1	99	84.538	ENSODEG00000011502	SND1	100	83.991	Octodon_degus
ENSAPEG00000007067	snd1	100	94.951	ENSONIG00000011481	snd1	97	94.951	Oreochromis_niloticus
ENSAPEG00000007067	snd1	98	83.708	ENSOANG00000000817	SND1	98	83.708	Ornithorhynchus_anatinus
ENSAPEG00000007067	snd1	100	82.895	ENSOCUG00000001620	SND1	100	82.895	Oryctolagus_cuniculus
ENSAPEG00000007067	snd1	100	94.072	ENSORLG00000015201	snd1	100	94.072	Oryzias_latipes
ENSAPEG00000007067	snd1	100	94.292	ENSORLG00020013991	snd1	100	94.292	Oryzias_latipes_hni
ENSAPEG00000007067	snd1	100	94.292	ENSORLG00015012436	snd1	100	94.292	Oryzias_latipes_hsok
ENSAPEG00000007067	snd1	100	94.402	ENSOMEG00000006406	snd1	100	94.402	Oryzias_melastigma
ENSAPEG00000007067	snd1	99	84.351	ENSOGAG00000013356	SND1	94	83.479	Otolemur_garnettii
ENSAPEG00000007067	snd1	97	82.413	ENSOARG00000002149	SND1	100	82.413	Ovis_aries
ENSAPEG00000007067	snd1	99	84.427	ENSPPAG00000042947	SND1	99	84.650	Pan_paniscus
ENSAPEG00000007067	snd1	100	83.662	ENSPPRG00000004494	SND1	100	83.662	Panthera_pardus
ENSAPEG00000007067	snd1	100	83.553	ENSPTIG00000014214	SND1	100	83.553	Panthera_tigris_altaica
ENSAPEG00000007067	snd1	99	84.427	ENSPTRG00000023911	SND1	99	84.650	Pan_troglodytes
ENSAPEG00000007067	snd1	97	84.763	ENSPANG00000011997	SND1	99	84.763	Papio_anubis
ENSAPEG00000007067	snd1	99	87.004	ENSPKIG00000023494	snd1	99	86.587	Paramormyrops_kingsleyae
ENSAPEG00000007067	snd1	92	94.498	ENSPMGG00000003629	snd1	100	94.498	Periophthalmus_magnuspinnatus
ENSAPEG00000007067	snd1	99	84.427	ENSPEMG00000010240	Snd1	100	83.553	Peromyscus_maniculatus_bairdii
ENSAPEG00000007067	snd1	97	73.702	ENSPMAG00000007915	-	99	73.589	Petromyzon_marinus
ENSAPEG00000007067	snd1	99	84.427	ENSPCIG00000011561	SND1	100	83.553	Phascolarctos_cinereus
ENSAPEG00000007067	snd1	100	95.939	ENSPFOG00000001557	snd1	100	95.939	Poecilia_formosa
ENSAPEG00000007067	snd1	100	95.939	ENSPLAG00000018459	snd1	97	95.939	Poecilia_latipinna
ENSAPEG00000007067	snd1	100	96.158	ENSPMEG00000006803	snd1	100	96.158	Poecilia_mexicana
ENSAPEG00000007067	snd1	100	95.829	ENSPREG00000002189	snd1	100	95.829	Poecilia_reticulata
ENSAPEG00000007067	snd1	91	91.667	ENSPPYG00000017972	SND1	100	91.667	Pongo_abelii
ENSAPEG00000007067	snd1	100	73.904	ENSPCAG00000011305	SND1	100	73.904	Procavia_capensis
ENSAPEG00000007067	snd1	99	84.761	ENSPCOG00000026791	SND1	100	85.006	Propithecus_coquereli
ENSAPEG00000007067	snd1	99	82.425	ENSPVAG00000013945	SND1	100	81.579	Pteropus_vampyrus
ENSAPEG00000007067	snd1	100	94.731	ENSPNYG00000000932	snd1	100	94.731	Pundamilia_nyererei
ENSAPEG00000007067	snd1	99	90.659	ENSPNAG00000001206	snd1	99	90.659	Pygocentrus_nattereri
ENSAPEG00000007067	snd1	98	84.340	ENSRNOG00000031173	Snd1	100	83.427	Rattus_norvegicus
ENSAPEG00000007067	snd1	69	87.689	ENSRBIG00000027782	-	93	87.689	Rhinopithecus_bieti
ENSAPEG00000007067	snd1	99	84.538	ENSRROG00000033020	SND1	100	83.662	Rhinopithecus_roxellana
ENSAPEG00000007067	snd1	99	84.316	ENSSBOG00000032461	SND1	99	84.537	Saimiri_boliviensis_boliviensis
ENSAPEG00000007067	snd1	98	81.236	ENSSHAG00000015359	SND1	100	81.236	Sarcophilus_harrisii
ENSAPEG00000007067	snd1	98	88.359	ENSSFOG00015001103	snd1	99	87.691	Scleropages_formosus
ENSAPEG00000007067	snd1	100	95.390	ENSSMAG00000001932	snd1	95	95.390	Scophthalmus_maximus
ENSAPEG00000007067	snd1	100	97.585	ENSSDUG00000002699	snd1	94	97.585	Seriola_dumerili
ENSAPEG00000007067	snd1	100	90.011	ENSSLDG00000001950	snd1	100	90.011	Seriola_lalandi_dorsalis
ENSAPEG00000007067	snd1	86	79.823	ENSSARG00000004877	SND1	92	79.823	Sorex_araneus
ENSAPEG00000007067	snd1	70	80.763	ENSSPUG00000017586	SND1	96	80.763	Sphenodon_punctatus
ENSAPEG00000007067	snd1	73	96.447	ENSSPAG00000021398	snd1	99	96.447	Stegastes_partitus
ENSAPEG00000007067	snd1	99	84.205	ENSSSCG00000016590	SND1	100	83.333	Sus_scrofa
ENSAPEG00000007067	snd1	100	93.960	ENSTRUG00000014067	snd1	100	93.194	Takifugu_rubripes
ENSAPEG00000007067	snd1	100	93.194	ENSTNIG00000011019	snd1	100	93.194	Tetraodon_nigroviridis
ENSAPEG00000007067	snd1	93	78.941	ENSTBEG00000003999	SND1	100	78.941	Tupaia_belangeri
ENSAPEG00000007067	snd1	99	80.200	ENSTTRG00000006059	SND1	100	79.386	Tursiops_truncatus
ENSAPEG00000007067	snd1	69	76.762	ENSUAMG00000002820	-	89	76.762	Ursus_americanus
ENSAPEG00000007067	snd1	87	83.650	ENSUAMG00000005604	-	93	83.650	Ursus_americanus
ENSAPEG00000007067	snd1	100	83.662	ENSUMAG00000005960	SND1	100	83.662	Ursus_maritimus
ENSAPEG00000007067	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSAPEG00000007067	snd1	100	83.662	ENSVVUG00000007226	SND1	100	83.662	Vulpes_vulpes
ENSAPEG00000007067	snd1	97	80.158	ENSXETG00000023043	snd1	100	79.909	Xenopus_tropicalis
ENSAPEG00000007067	snd1	92	93.824	ENSXCOG00000013629	snd1	99	93.824	Xiphophorus_couchianus
ENSAPEG00000007067	snd1	100	96.597	ENSXMAG00000011469	snd1	100	96.597	Xiphophorus_maculatus