EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000007706 (Gene tree)
Gene ID: -
Gene Symbol: msi2a
Alias: zgc:174035|zgc:63812
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 253652 bases
Position: chr15:19774269-20027920
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000010807	RRM_1	PF00076.22	2.9e-33	1	2
ENSAPEP00000010807	RRM_1	PF00076.22	2.9e-33	2	2
ENSAPEP00000010836	RRM_1	PF00076.22	4.6e-33	1	2
ENSAPEP00000010836	RRM_1	PF00076.22	4.6e-33	2	2
ENSAPEP00000010762	RRM_1	PF00076.22	6.3e-33	1	2
ENSAPEP00000010762	RRM_1	PF00076.22	6.3e-33	2	2
ENSAPEP00000010830	RRM_1	PF00076.22	4.2e-29	1	2
ENSAPEP00000010830	RRM_1	PF00076.22	4.2e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000011104	-	1244	-	ENSAPEP00000010807	347 (aa)	-	UPI0004966EDC
ENSAPET00000011128	-	942	-	ENSAPEP00000010830	313 (aa)	-	-
ENSAPET00000011134	-	1362	-	ENSAPEP00000010836	396 (aa)	-	-
ENSAPET00000011058	-	1500	-	ENSAPEP00000010762	442 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000007706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000007706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000007706	msi2a	58	38.624	ENSAPEG00000004179	-	80	35.106
ENSAPEG00000007706	msi2a	54	46.561	ENSAPEG00000005603	hnrnpd	57	46.561
ENSAPEG00000007706	msi2a	53	37.500	ENSAPEG00000002224	-	79	38.798
ENSAPEG00000007706	msi2a	100	67.429	ENSAPEG00000006857	-	84	67.429
ENSAPEG00000007706	msi2a	57	37.222	ENSAPEG00000022522	hnrnpa3	87	34.737
ENSAPEG00000007706	msi2a	57	35.333	ENSAPEG00000002274	-	96	35.714
ENSAPEG00000007706	msi2a	56	45.455	ENSAPEG00000017599	hnrnpaba	68	48.705
ENSAPEG00000007706	msi2a	100	65.812	ENSAPEG00000003245	MSI1	100	65.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000007706	msi2a	100	88.110	ENSG00000153944	MSI2	100	88.615	Homo_sapiens
ENSAPEG00000007706	msi2a	100	100.000	ENSAPOG00000001658	msi2a	100	100.000	Acanthochromis_polyacanthus
ENSAPEG00000007706	msi2a	98	84.356	ENSAMEG00000002697	MSI2	99	88.650	Ailuropoda_melanoleuca
ENSAPEG00000007706	msi2a	100	81.633	ENSACIG00000009475	msi2a	100	76.127	Amphilophus_citrinellus
ENSAPEG00000007706	msi2a	56	91.111	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSAPEG00000007706	msi2a	93	93.165	ENSATEG00000003301	-	100	93.165	Anabas_testudineus
ENSAPEG00000007706	msi2a	100	100.000	ENSATEG00000010498	msi2a	100	100.000	Anabas_testudineus
ENSAPEG00000007706	msi2a	89	93.478	ENSACAG00000005452	MSI2	70	90.566	Anolis_carolinensis
ENSAPEG00000007706	msi2a	100	88.110	ENSANAG00000037827	MSI2	100	88.110	Aotus_nancymaae
ENSAPEG00000007706	msi2a	100	99.424	ENSACLG00000007752	msi2a	100	99.424	Astatotilapia_calliptera
ENSAPEG00000007706	msi2a	100	94.569	ENSAMXG00000010474	msi2b	100	94.569	Astyanax_mexicanus
ENSAPEG00000007706	msi2a	100	89.809	ENSAMXG00000032796	msi2a	100	90.127	Astyanax_mexicanus
ENSAPEG00000007706	msi2a	98	88.961	ENSBTAG00000004406	MSI2	94	90.099	Bos_taurus
ENSAPEG00000007706	msi2a	67	58.635	WBGene00003423	msi-1	76	58.635	Caenorhabditis_elegans
ENSAPEG00000007706	msi2a	100	88.110	ENSCJAG00000013998	MSI2	100	88.110	Callithrix_jacchus
ENSAPEG00000007706	msi2a	94	87.580	ENSCAFG00020025620	MSI2	81	87.188	Canis_lupus_dingo
ENSAPEG00000007706	msi2a	100	87.195	ENSCHIG00000016580	MSI2	100	87.195	Capra_hircus
ENSAPEG00000007706	msi2a	93	88.298	ENSCPOG00000034042	MSI2	99	88.298	Cavia_porcellus
ENSAPEG00000007706	msi2a	100	88.110	ENSCCAG00000033927	MSI2	100	88.110	Cebus_capucinus
ENSAPEG00000007706	msi2a	93	92.444	ENSCATG00000040879	MSI2	100	87.805	Cercocebus_atys
ENSAPEG00000007706	msi2a	100	87.749	ENSCLAG00000014325	MSI2	100	88.184	Chinchilla_lanigera
ENSAPEG00000007706	msi2a	100	88.110	ENSCSAG00000005633	MSI2	100	88.110	Chlorocebus_sabaeus
ENSAPEG00000007706	msi2a	71	88.000	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSAPEG00000007706	msi2a	93	94.581	ENSCPBG00000009942	MSI2	95	86.142	Chrysemys_picta_bellii
ENSAPEG00000007706	msi2a	87	53.171	ENSCING00000018579	-	90	53.659	Ciona_intestinalis
ENSAPEG00000007706	msi2a	62	64.251	ENSCSAVG00000010397	-	67	68.421	Ciona_savignyi
ENSAPEG00000007706	msi2a	93	92.444	ENSCANG00000036414	MSI2	100	88.615	Colobus_angolensis_palliatus
ENSAPEG00000007706	msi2a	100	87.538	ENSCGRG00001013330	Msi2	100	87.538	Cricetulus_griseus_chok1gshd
ENSAPEG00000007706	msi2a	98	84.098	ENSCGRG00000003141	Msi2	100	88.379	Cricetulus_griseus_crigri
ENSAPEG00000007706	msi2a	54	77.596	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSAPEG00000007706	msi2a	100	81.173	ENSCSEG00000003266	-	100	81.173	Cynoglossus_semilaevis
ENSAPEG00000007706	msi2a	81	81.443	ENSCSEG00000013557	msi2a	83	80.412	Cynoglossus_semilaevis
ENSAPEG00000007706	msi2a	100	99.712	ENSCVAG00000017075	msi2a	100	99.712	Cyprinodon_variegatus
ENSAPEG00000007706	msi2a	100	81.443	ENSDARG00000033901	msi2a	100	74.242	Danio_rerio
ENSAPEG00000007706	msi2a	97	91.235	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSAPEG00000007706	msi2a	93	93.056	ENSDNOG00000014501	MSI2	100	93.056	Dasypus_novemcinctus
ENSAPEG00000007706	msi2a	53	88.182	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSAPEG00000007706	msi2a	81	81.726	ENSDORG00000005394	Msi2	84	81.726	Dipodomys_ordii
ENSAPEG00000007706	msi2a	95	56.125	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSAPEG00000007706	msi2a	69	72.368	ENSETEG00000012450	-	64	72.368	Echinops_telfairi
ENSAPEG00000007706	msi2a	93	63.578	ENSEBUG00000006732	msi2a	87	63.578	Eptatretus_burgeri
ENSAPEG00000007706	msi2a	93	90.301	ENSEASG00005002965	MSI2	97	80.114	Equus_asinus_asinus
ENSAPEG00000007706	msi2a	100	85.515	ENSECAG00000011435	MSI2	100	85.915	Equus_caballus
ENSAPEG00000007706	msi2a	86	77.470	ENSEEUG00000007810	MSI2	100	77.470	Erinaceus_europaeus
ENSAPEG00000007706	msi2a	100	88.657	ENSELUG00000001361	msi2b	100	88.657	Esox_lucius
ENSAPEG00000007706	msi2a	100	95.208	ENSELUG00000011747	msi2a	100	95.208	Esox_lucius
ENSAPEG00000007706	msi2a	100	88.110	ENSFCAG00000041686	MSI2	100	88.110	Felis_catus
ENSAPEG00000007706	msi2a	97	85.358	ENSFDAG00000016118	MSI2	100	88.650	Fukomys_damarensis
ENSAPEG00000007706	msi2a	100	99.424	ENSFHEG00000000084	msi2a	100	99.424	Fundulus_heteroclitus
ENSAPEG00000007706	msi2a	52	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSAPEG00000007706	msi2a	100	86.895	ENSGALG00000005567	MSI2	100	87.320	Gallus_gallus
ENSAPEG00000007706	msi2a	96	90.164	ENSGAFG00000006974	msi2a	90	100.000	Gambusia_affinis
ENSAPEG00000007706	msi2a	100	87.547	ENSGAGG00000016542	MSI2	100	85.246	Gopherus_agassizii
ENSAPEG00000007706	msi2a	93	92.444	ENSGGOG00000013182	MSI2	100	88.615	Gorilla_gorilla
ENSAPEG00000007706	msi2a	100	99.424	ENSHBUG00000020800	msi2a	100	99.424	Haplochromis_burtoni
ENSAPEG00000007706	msi2a	100	78.917	ENSHGLG00000012444	MSI2	100	79.251	Heterocephalus_glaber_female
ENSAPEG00000007706	msi2a	78	84.058	ENSHGLG00100003744	MSI2	100	84.615	Heterocephalus_glaber_male
ENSAPEG00000007706	msi2a	53	88.288	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSAPEG00000007706	msi2a	97	99.293	ENSHCOG00000000266	msi2a	97	97.337	Hippocampus_comes
ENSAPEG00000007706	msi2a	95	82.422	ENSHCOG00000017241	-	75	82.031	Hippocampus_comes
ENSAPEG00000007706	msi2a	100	90.415	ENSIPUG00000003732	msi2b	100	90.415	Ictalurus_punctatus
ENSAPEG00000007706	msi2a	100	92.013	ENSIPUG00000021097	msi2a	100	92.332	Ictalurus_punctatus
ENSAPEG00000007706	msi2a	93	88.298	ENSSTOG00000007884	MSI2	99	88.298	Ictidomys_tridecemlineatus
ENSAPEG00000007706	msi2a	53	88.182	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSAPEG00000007706	msi2a	78	78.894	ENSJJAG00000006292	-	100	78.392	Jaculus_jaculus
ENSAPEG00000007706	msi2a	96	93.968	ENSKMAG00000009494	msi2a	96	93.968	Kryptolebias_marmoratus
ENSAPEG00000007706	msi2a	100	100.000	ENSLBEG00000007061	msi2a	100	100.000	Labrus_bergylta
ENSAPEG00000007706	msi2a	97	67.742	ENSLBEG00000026223	-	100	66.862	Labrus_bergylta
ENSAPEG00000007706	msi2a	100	83.204	ENSLOCG00000004675	msi2b	100	86.992	Lepisosteus_oculatus
ENSAPEG00000007706	msi2a	93	92.444	ENSMFAG00000003775	MSI2	100	88.615	Macaca_fascicularis
ENSAPEG00000007706	msi2a	93	92.444	ENSMMUG00000002069	MSI2	100	88.615	Macaca_mulatta
ENSAPEG00000007706	msi2a	100	88.110	ENSMNEG00000045275	MSI2	100	88.110	Macaca_nemestrina
ENSAPEG00000007706	msi2a	93	92.444	ENSMLEG00000033888	MSI2	100	88.615	Mandrillus_leucophaeus
ENSAPEG00000007706	msi2a	100	99.713	ENSMAMG00000010503	msi2a	100	99.713	Mastacembelus_armatus
ENSAPEG00000007706	msi2a	100	90.096	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSAPEG00000007706	msi2a	100	99.361	ENSMZEG00005007676	msi2a	100	99.361	Maylandia_zebra
ENSAPEG00000007706	msi2a	100	87.216	ENSMAUG00000003862	Msi2	100	87.644	Mesocricetus_auratus
ENSAPEG00000007706	msi2a	100	88.110	ENSMICG00000013598	-	100	88.110	Microcebus_murinus
ENSAPEG00000007706	msi2a	100	71.264	ENSMICG00000032913	-	100	70.977	Microcebus_murinus
ENSAPEG00000007706	msi2a	100	87.464	ENSMOCG00000005820	Msi2	100	87.896	Microtus_ochrogaster
ENSAPEG00000007706	msi2a	96	87.500	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSAPEG00000007706	msi2a	78	83.575	ENSMODG00000014790	MSI2	100	84.135	Monodelphis_domestica
ENSAPEG00000007706	msi2a	100	99.712	ENSMALG00000000071	msi2a	100	99.712	Monopterus_albus
ENSAPEG00000007706	msi2a	100	87.805	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSAPEG00000007706	msi2a	100	87.805	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSAPEG00000007706	msi2a	100	87.805	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSAPEG00000007706	msi2a	100	87.805	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSAPEG00000007706	msi2a	98	89.286	ENSMPUG00000015377	MSI2	95	89.286	Mustela_putorius_furo
ENSAPEG00000007706	msi2a	98	89.286	ENSMLUG00000007865	MSI2	94	90.429	Myotis_lucifugus
ENSAPEG00000007706	msi2a	100	87.464	ENSNGAG00000017807	Msi2	100	87.896	Nannospalax_galili
ENSAPEG00000007706	msi2a	100	99.361	ENSNBRG00000014596	msi2a	100	99.361	Neolamprologus_brichardi
ENSAPEG00000007706	msi2a	93	92.444	ENSNLEG00000008059	MSI2	95	93.301	Nomascus_leucogenys
ENSAPEG00000007706	msi2a	69	83.553	ENSOPRG00000000872	-	64	83.553	Ochotona_princeps
ENSAPEG00000007706	msi2a	100	87.749	ENSODEG00000011974	MSI2	100	88.184	Octodon_degus
ENSAPEG00000007706	msi2a	55	100.000	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSAPEG00000007706	msi2a	91	91.324	ENSOANG00000005667	MSI2	88	83.553	Ornithorhynchus_anatinus
ENSAPEG00000007706	msi2a	98	89.286	ENSOCUG00000010440	MSI2	94	90.429	Oryctolagus_cuniculus
ENSAPEG00000007706	msi2a	100	97.125	ENSORLG00000009671	msi2a	100	97.125	Oryzias_latipes
ENSAPEG00000007706	msi2a	100	97.125	ENSORLG00020021556	msi2a	100	97.125	Oryzias_latipes_hni
ENSAPEG00000007706	msi2a	100	97.125	ENSORLG00015004592	msi2a	100	97.125	Oryzias_latipes_hsok
ENSAPEG00000007706	msi2a	93	99.658	ENSOMEG00000000146	msi2a	96	99.658	Oryzias_melastigma
ENSAPEG00000007706	msi2a	98	85.714	ENSOGAG00000005621	MSI2	100	85.714	Otolemur_garnettii
ENSAPEG00000007706	msi2a	97	85.358	ENSPPAG00000037697	MSI2	100	88.615	Pan_paniscus
ENSAPEG00000007706	msi2a	97	90.429	ENSPPRG00000001848	MSI2	91	93.722	Panthera_pardus
ENSAPEG00000007706	msi2a	94	87.658	ENSPTIG00000021678	MSI2	96	88.141	Panthera_tigris_altaica
ENSAPEG00000007706	msi2a	71	74.459	ENSPTIG00000021873	-	90	75.527	Panthera_tigris_altaica
ENSAPEG00000007706	msi2a	93	92.444	ENSPTRG00000009437	MSI2	100	88.615	Pan_troglodytes
ENSAPEG00000007706	msi2a	100	88.110	ENSPANG00000022319	MSI2	100	88.110	Papio_anubis
ENSAPEG00000007706	msi2a	96	85.350	ENSPKIG00000007038	-	100	80.747	Paramormyrops_kingsleyae
ENSAPEG00000007706	msi2a	100	89.394	ENSPSIG00000008618	MSI2	78	94.821	Pelodiscus_sinensis
ENSAPEG00000007706	msi2a	100	99.361	ENSPMGG00000005888	msi2a	100	99.361	Periophthalmus_magnuspinnatus
ENSAPEG00000007706	msi2a	53	88.182	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSAPEG00000007706	msi2a	100	86.072	ENSPCIG00000006063	MSI2	100	86.479	Phascolarctos_cinereus
ENSAPEG00000007706	msi2a	54	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSAPEG00000007706	msi2a	55	100.000	ENSPLAG00000000436	msi2a	72	100.000	Poecilia_latipinna
ENSAPEG00000007706	msi2a	56	100.000	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSAPEG00000007706	msi2a	99	97.444	ENSPREG00000000881	msi2a	99	97.444	Poecilia_reticulata
ENSAPEG00000007706	msi2a	93	89.916	ENSPPYG00000008244	-	100	89.916	Pongo_abelii
ENSAPEG00000007706	msi2a	90	64.286	ENSPCAG00000010552	MSI2	100	64.286	Procavia_capensis
ENSAPEG00000007706	msi2a	53	88.889	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSAPEG00000007706	msi2a	93	85.274	ENSPVAG00000017053	MSI2	99	85.274	Pteropus_vampyrus
ENSAPEG00000007706	msi2a	100	99.361	ENSPNYG00000018393	msi2a	100	99.361	Pundamilia_nyererei
ENSAPEG00000007706	msi2a	100	94.586	ENSPNAG00000014957	msi2a	100	94.586	Pygocentrus_nattereri
ENSAPEG00000007706	msi2a	100	94.268	ENSPNAG00000000844	msi2b	100	94.268	Pygocentrus_nattereri
ENSAPEG00000007706	msi2a	93	92.806	ENSRNOG00000025338	Msi2	100	92.806	Rattus_norvegicus
ENSAPEG00000007706	msi2a	53	88.182	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSAPEG00000007706	msi2a	93	92.857	ENSSBOG00000026425	MSI2	100	88.615	Saimiri_boliviensis_boliviensis
ENSAPEG00000007706	msi2a	97	85.358	ENSSHAG00000008672	MSI2	100	88.615	Sarcophilus_harrisii
ENSAPEG00000007706	msi2a	95	83.471	ENSSFOG00015012168	msi2b	80	83.673	Scleropages_formosus
ENSAPEG00000007706	msi2a	97	87.459	ENSSFOG00015021687	-	97	87.129	Scleropages_formosus
ENSAPEG00000007706	msi2a	100	99.712	ENSSMAG00000018484	msi2a	100	99.712	Scophthalmus_maximus
ENSAPEG00000007706	msi2a	100	100.000	ENSSDUG00000014507	msi2a	100	100.000	Seriola_dumerili
ENSAPEG00000007706	msi2a	100	84.478	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSAPEG00000007706	msi2a	100	100.000	ENSSLDG00000017172	msi2a	100	100.000	Seriola_lalandi_dorsalis
ENSAPEG00000007706	msi2a	55	92.405	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSAPEG00000007706	msi2a	97	95.588	ENSSPAG00000017793	msi2a	100	87.988	Stegastes_partitus
ENSAPEG00000007706	msi2a	100	88.110	ENSSSCG00000038505	MSI2	100	88.110	Sus_scrofa
ENSAPEG00000007706	msi2a	78	84.058	ENSTGUG00000008452	MSI2	100	84.615	Taeniopygia_guttata
ENSAPEG00000007706	msi2a	100	91.642	ENSTRUG00000021248	msi2a	100	91.642	Takifugu_rubripes
ENSAPEG00000007706	msi2a	70	77.686	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSAPEG00000007706	msi2a	93	84.454	ENSTTRG00000002189	MSI2	100	84.454	Tursiops_truncatus
ENSAPEG00000007706	msi2a	98	89.286	ENSUAMG00000000700	MSI2	91	93.722	Ursus_americanus
ENSAPEG00000007706	msi2a	89	85.227	ENSUMAG00000000505	MSI2	95	85.227	Ursus_maritimus
ENSAPEG00000007706	msi2a	58	81.768	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSAPEG00000007706	msi2a	100	87.749	ENSVVUG00000011783	MSI2	97	91.705	Vulpes_vulpes
ENSAPEG00000007706	msi2a	96	98.413	ENSXCOG00000006113	msi2a	85	98.413	Xiphophorus_couchianus
ENSAPEG00000007706	msi2a	100	99.424	ENSXMAG00000000608	msi2a	100	99.424	Xiphophorus_maculatus