EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000007713 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 3930 bases
Position: chr17:23087095-23091024
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000010728	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000011022	-	1929	-	ENSAPEP00000010728	262 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000007713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000007713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000007713	rab42a	70	40.437	ENSAPEG00000022106	rab25b	87	40.437
ENSAPEG00000007713	rab42a	68	30.208	ENSAPEG00000014649	rasl11a	72	30.208
ENSAPEG00000007713	rab42a	62	34.337	ENSAPEG00000000306	RAB7A	79	34.337
ENSAPEG00000007713	rab42a	60	38.365	ENSAPEG00000023338	si:dkey-13a21.4	71	38.365
ENSAPEG00000007713	rab42a	58	36.842	ENSAPEG00000008940	si:ch73-116o1.2	78	36.585
ENSAPEG00000007713	rab42a	60	38.217	ENSAPEG00000020892	rab6ba	82	38.217
ENSAPEG00000007713	rab42a	63	30.723	ENSAPEG00000003164	rabl2	71	30.723
ENSAPEG00000007713	rab42a	61	44.375	ENSAPEG00000012044	rab30	88	41.111
ENSAPEG00000007713	rab42a	70	33.333	ENSAPEG00000023408	rheb	92	33.333
ENSAPEG00000007713	rab42a	58	33.775	ENSAPEG00000009546	hrasb	85	32.927
ENSAPEG00000007713	rab42a	60	38.217	ENSAPEG00000005857	-	78	38.562
ENSAPEG00000007713	rab42a	58	44.079	ENSAPEG00000005001	rab33ba	65	44.079
ENSAPEG00000007713	rab42a	83	54.128	ENSAPEG00000017138	RAB39B	93	57.789
ENSAPEG00000007713	rab42a	70	40.984	ENSAPEG00000016590	rab11bb	83	40.984
ENSAPEG00000007713	rab42a	60	38.217	ENSAPEG00000007731	rab6bb	75	38.217
ENSAPEG00000007713	rab42a	61	35.404	ENSAPEG00000011251	rab36	66	35.465
ENSAPEG00000007713	rab42a	63	40.000	ENSAPEG00000005392	rab18a	80	40.000
ENSAPEG00000007713	rab42a	73	38.743	ENSAPEG00000013255	rab12	76	38.743
ENSAPEG00000007713	rab42a	82	37.850	ENSAPEG00000022217	-	97	38.318
ENSAPEG00000007713	rab42a	83	55.046	ENSAPEG00000016172	-	93	58.794
ENSAPEG00000007713	rab42a	64	44.048	ENSAPEG00000013500	rab25a	79	44.048
ENSAPEG00000007713	rab42a	70	40.984	ENSAPEG00000000075	rab11a	84	40.984
ENSAPEG00000007713	rab42a	63	34.756	ENSAPEG00000011209	rab22a	84	34.756
ENSAPEG00000007713	rab42a	63	38.095	ENSAPEG00000014149	rab9b	82	38.095
ENSAPEG00000007713	rab42a	72	43.158	ENSAPEG00000022171	zgc:171927	90	43.386
ENSAPEG00000007713	rab42a	72	46.809	ENSAPEG00000010294	rab2a	89	46.316
ENSAPEG00000007713	rab42a	68	42.135	ENSAPEG00000022488	-	87	42.135
ENSAPEG00000007713	rab42a	65	34.682	ENSAPEG00000018607	rab34b	62	34.682
ENSAPEG00000007713	rab42a	62	35.802	ENSAPEG00000013376	rab5aa	74	35.802
ENSAPEG00000007713	rab42a	63	41.212	ENSAPEG00000022923	rab18b	80	41.212
ENSAPEG00000007713	rab42a	80	38.028	ENSAPEG00000001822	-	78	42.262
ENSAPEG00000007713	rab42a	65	34.118	ENSAPEG00000002251	rras	85	34.118
ENSAPEG00000007713	rab42a	60	39.490	ENSAPEG00000007931	RAB41	73	39.490
ENSAPEG00000007713	rab42a	63	36.585	ENSAPEG00000017868	-	74	36.585
ENSAPEG00000007713	rab42a	63	35.542	ENSAPEG00000008980	rras2	81	35.542
ENSAPEG00000007713	rab42a	68	42.135	ENSAPEG00000001358	rab1ab	87	42.135
ENSAPEG00000007713	rab42a	54	40.411	ENSAPEG00000015430	-	80	48.936
ENSAPEG00000007713	rab42a	61	41.358	ENSAPEG00000005176	zgc:101559	69	41.358
ENSAPEG00000007713	rab42a	63	31.325	ENSAPEG00000018205	si:cabz01085950.1	82	31.325
ENSAPEG00000007713	rab42a	62	34.337	ENSAPEG00000017200	RAB7A	79	34.337
ENSAPEG00000007713	rab42a	82	37.850	ENSAPEG00000014246	rab14	97	37.850
ENSAPEG00000007713	rab42a	58	33.775	ENSAPEG00000007675	kras	91	32.022
ENSAPEG00000007713	rab42a	75	31.188	ENSAPEG00000010503	rab34a	65	32.948
ENSAPEG00000007713	rab42a	60	40.625	ENSAPEG00000015376	rab33a	72	40.625
ENSAPEG00000007713	rab42a	64	33.929	ENSAPEG00000001800	-	89	33.929
ENSAPEG00000007713	rab42a	80	37.383	ENSAPEG00000007912	rab15	78	41.667
ENSAPEG00000007713	rab42a	63	32.530	ENSAPEG00000016212	rhebl1	87	32.530
ENSAPEG00000007713	rab42a	63	43.293	ENSAPEG00000001130	rab35b	80	43.293
ENSAPEG00000007713	rab42a	60	34.177	ENSAPEG00000019758	rab23	74	34.641
ENSAPEG00000007713	rab42a	70	41.530	ENSAPEG00000022135	rab11al	84	41.530
ENSAPEG00000007713	rab42a	68	41.011	ENSAPEG00000012105	rab1ba	91	40.217
ENSAPEG00000007713	rab42a	65	41.420	ENSAPEG00000004121	-	84	41.420
ENSAPEG00000007713	rab42a	67	41.714	ENSAPEG00000006500	si:dkey-16l2.16	82	41.714
ENSAPEG00000007713	rab42a	63	37.647	ENSAPEG00000024142	rab9a	82	37.647
ENSAPEG00000007713	rab42a	58	40.132	ENSAPEG00000002915	RAB17	66	40.132
ENSAPEG00000007713	rab42a	63	39.286	ENSAPEG00000015652	-	77	39.286
ENSAPEG00000007713	rab42a	70	42.077	ENSAPEG00000009177	rab11ba	83	42.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000007713	rab42a	83	98.165	ENSAPOG00000009188	rab42a	100	98.165	Acanthochromis_polyacanthus
ENSAPEG00000007713	rab42a	83	96.789	ENSACIG00000003102	rab42a	100	96.789	Amphilophus_citrinellus
ENSAPEG00000007713	rab42a	100	100.000	ENSAOCG00000012921	rab42a	100	100.000	Amphiprion_ocellaris
ENSAPEG00000007713	rab42a	83	95.872	ENSATEG00000009052	rab42a	100	95.872	Anabas_testudineus
ENSAPEG00000007713	rab42a	83	96.330	ENSACLG00000007514	rab42a	100	95.872	Astatotilapia_calliptera
ENSAPEG00000007713	rab42a	83	90.826	ENSAMXG00000032729	rab42a	100	89.450	Astyanax_mexicanus
ENSAPEG00000007713	rab42a	83	93.119	ENSCSEG00000010582	rab42a	100	93.119	Cynoglossus_semilaevis
ENSAPEG00000007713	rab42a	83	47.032	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSAPEG00000007713	rab42a	83	90.367	ENSDARG00000034215	rab42a	100	88.991	Danio_rerio
ENSAPEG00000007713	rab42a	83	89.450	ENSELUG00000010345	rab42a	100	89.450	Esox_lucius
ENSAPEG00000007713	rab42a	83	97.706	ENSFHEG00000013106	rab42a	100	97.706	Fundulus_heteroclitus
ENSAPEG00000007713	rab42a	83	95.872	ENSGAFG00000002141	rab42a	100	95.872	Gambusia_affinis
ENSAPEG00000007713	rab42a	94	94.737	ENSHBUG00000015126	rab42a	89	94.915	Haplochromis_burtoni
ENSAPEG00000007713	rab42a	83	87.615	ENSIPUG00000011376	rab42a	100	86.239	Ictalurus_punctatus
ENSAPEG00000007713	rab42a	83	95.872	ENSKMAG00000007267	rab42a	100	95.872	Kryptolebias_marmoratus
ENSAPEG00000007713	rab42a	83	96.789	ENSLBEG00000001193	rab42a	100	96.789	Labrus_bergylta
ENSAPEG00000007713	rab42a	83	63.761	ENSLACG00000012755	-	94	68.000	Latimeria_chalumnae
ENSAPEG00000007713	rab42a	83	51.142	ENSLOCG00000015825	-	99	51.142	Lepisosteus_oculatus
ENSAPEG00000007713	rab42a	83	83.028	ENSLOCG00000003453	rab42a	94	87.500	Lepisosteus_oculatus
ENSAPEG00000007713	rab42a	83	97.248	ENSMAMG00000002296	rab42a	100	97.248	Mastacembelus_armatus
ENSAPEG00000007713	rab42a	94	94.737	ENSMZEG00005012460	rab42a	89	94.915	Maylandia_zebra
ENSAPEG00000007713	rab42a	83	92.661	ENSMMOG00000014358	rab42a	100	92.661	Mola_mola
ENSAPEG00000007713	rab42a	95	93.281	ENSNBRG00000021487	rab42a	89	95.339	Neolamprologus_brichardi
ENSAPEG00000007713	rab42a	83	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSAPEG00000007713	rab42a	83	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSAPEG00000007713	rab42a	83	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSAPEG00000007713	rab42a	83	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSAPEG00000007713	rab42a	74	49.485	ENSPKIG00000015234	-	93	49.485	Paramormyrops_kingsleyae
ENSAPEG00000007713	rab42a	83	77.982	ENSPKIG00000021215	-	93	82.412	Paramormyrops_kingsleyae
ENSAPEG00000007713	rab42a	75	96.447	ENSPMGG00000024112	rab42a	90	96.447	Periophthalmus_magnuspinnatus
ENSAPEG00000007713	rab42a	97	86.770	ENSPFOG00000004838	rab42a	84	95.495	Poecilia_formosa
ENSAPEG00000007713	rab42a	83	95.413	ENSPLAG00000005628	rab42a	100	95.413	Poecilia_latipinna
ENSAPEG00000007713	rab42a	83	95.413	ENSPMEG00000019497	rab42a	100	95.413	Poecilia_mexicana
ENSAPEG00000007713	rab42a	83	95.872	ENSPREG00000013962	rab42a	100	95.872	Poecilia_reticulata
ENSAPEG00000007713	rab42a	94	94.737	ENSPNYG00000010325	rab42a	89	94.915	Pundamilia_nyererei
ENSAPEG00000007713	rab42a	83	90.367	ENSPNAG00000016567	rab42a	100	88.991	Pygocentrus_nattereri
ENSAPEG00000007713	rab42a	83	46.119	ENSSFOG00015016000	-	97	46.119	Scleropages_formosus
ENSAPEG00000007713	rab42a	83	85.321	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSAPEG00000007713	rab42a	83	93.578	ENSSMAG00000020311	rab42a	100	93.578	Scophthalmus_maximus
ENSAPEG00000007713	rab42a	83	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSAPEG00000007713	rab42a	83	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSAPEG00000007713	rab42a	83	98.165	ENSSPAG00000016167	rab42a	100	98.165	Stegastes_partitus
ENSAPEG00000007713	rab42a	83	95.872	ENSTRUG00000010224	rab42a	100	95.872	Takifugu_rubripes
ENSAPEG00000007713	rab42a	83	96.330	ENSXCOG00000003428	rab42a	100	96.330	Xiphophorus_couchianus
ENSAPEG00000007713	rab42a	83	96.330	ENSXMAG00000028376	rab42a	100	96.330	Xiphophorus_maculatus