EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000007889 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 18893 bases
Position: chr10:20784750-20803642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000010992	zf-C2H2	PF00096.26	1.2e-34	1	6
ENSAPEP00000010992	zf-C2H2	PF00096.26	1.2e-34	2	6
ENSAPEP00000010992	zf-C2H2	PF00096.26	1.2e-34	3	6
ENSAPEP00000010992	zf-C2H2	PF00096.26	1.2e-34	4	6
ENSAPEP00000010992	zf-C2H2	PF00096.26	1.2e-34	5	6
ENSAPEP00000010992	zf-C2H2	PF00096.26	1.2e-34	6	6
ENSAPEP00000011000	zf-C2H2	PF00096.26	2e-16	1	3
ENSAPEP00000011000	zf-C2H2	PF00096.26	2e-16	2	3
ENSAPEP00000011000	zf-C2H2	PF00096.26	2e-16	3	3
ENSAPEP00000010992	zf-met	PF12874.7	1e-16	1	2
ENSAPEP00000010992	zf-met	PF12874.7	1e-16	2	2
ENSAPEP00000011000	zf-met	PF12874.7	6.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000011295	-	915	-	ENSAPEP00000010992	304 (aa)	-	-
ENSAPET00000011303	-	2895	-	ENSAPEP00000011000	656 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000007889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000007889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000007889	-	72	34.862	ENSAPEG00000018471	-	76	34.862
ENSAPEG00000007889	-	74	40.969	ENSAPEG00000010602	-	77	40.969
ENSAPEG00000007889	-	77	42.188	ENSAPEG00000001546	-	86	42.188
ENSAPEG00000007889	-	72	39.640	ENSAPEG00000010013	-	55	50.000
ENSAPEG00000007889	-	92	37.719	ENSAPEG00000016118	-	98	38.462
ENSAPEG00000007889	-	88	35.526	ENSAPEG00000012926	-	83	36.596
ENSAPEG00000007889	-	84	36.508	ENSAPEG00000016601	-	87	36.508
ENSAPEG00000007889	-	85	37.281	ENSAPEG00000007141	-	58	37.281
ENSAPEG00000007889	-	78	36.800	ENSAPEG00000016196	gfi1b	55	37.500
ENSAPEG00000007889	-	75	36.681	ENSAPEG00000002661	-	96	36.681
ENSAPEG00000007889	-	73	35.135	ENSAPEG00000009553	-	51	35.583
ENSAPEG00000007889	-	81	50.588	ENSAPEG00000012236	-	58	50.588
ENSAPEG00000007889	-	84	36.087	ENSAPEG00000004427	si:ch73-144d13.7	93	36.364
ENSAPEG00000007889	-	99	64.441	ENSAPEG00000007910	-	100	64.441
ENSAPEG00000007889	-	74	37.500	ENSAPEG00000011635	-	55	37.615
ENSAPEG00000007889	-	83	43.396	ENSAPEG00000015337	-	98	37.824
ENSAPEG00000007889	-	77	38.889	ENSAPEG00000018796	-	79	38.889
ENSAPEG00000007889	-	84	39.583	ENSAPEG00000008746	-	60	39.175
ENSAPEG00000007889	-	88	36.681	ENSAPEG00000013113	-	52	36.681
ENSAPEG00000007889	-	79	45.283	ENSAPEG00000009826	-	68	40.994
ENSAPEG00000007889	-	75	37.815	ENSAPEG00000018332	-	50	37.815
ENSAPEG00000007889	-	78	33.772	ENSAPEG00000013097	-	77	33.772
ENSAPEG00000007889	-	84	50.000	ENSAPEG00000006650	-	89	50.000
ENSAPEG00000007889	-	91	42.718	ENSAPEG00000008020	-	98	45.783
ENSAPEG00000007889	-	76	38.182	ENSAPEG00000012243	-	75	38.372
ENSAPEG00000007889	-	84	33.621	ENSAPEG00000000208	ZNF319	87	33.621
ENSAPEG00000007889	-	86	33.186	ENSAPEG00000016462	-	69	38.650
ENSAPEG00000007889	-	79	40.217	ENSAPEG00000009533	-	75	40.217
ENSAPEG00000007889	-	86	34.722	ENSAPEG00000019106	-	56	35.652
ENSAPEG00000007889	-	79	36.986	ENSAPEG00000018460	-	77	36.530
ENSAPEG00000007889	-	81	41.489	ENSAPEG00000001556	-	69	41.489
ENSAPEG00000007889	-	80	39.827	ENSAPEG00000009190	-	78	38.961
ENSAPEG00000007889	-	95	39.496	ENSAPEG00000011646	-	54	46.835
ENSAPEG00000007889	-	87	43.590	ENSAPEG00000019026	znf236	55	43.590
ENSAPEG00000007889	-	91	42.735	ENSAPEG00000012217	-	61	42.735
ENSAPEG00000007889	-	77	31.301	ENSAPEG00000016846	prdm5	73	32.487
ENSAPEG00000007889	-	71	38.961	ENSAPEG00000004256	-	98	38.961
ENSAPEG00000007889	-	73	39.024	ENSAPEG00000013048	-	58	39.024
ENSAPEG00000007889	-	75	34.498	ENSAPEG00000013044	-	57	35.751
ENSAPEG00000007889	-	74	46.988	ENSAPEG00000019755	-	86	31.984
ENSAPEG00000007889	-	79	39.316	ENSAPEG00000017116	-	56	40.659
ENSAPEG00000007889	-	88	50.000	ENSAPEG00000006358	znf341	53	43.333
ENSAPEG00000007889	-	85	47.692	ENSAPEG00000007389	-	91	40.517
ENSAPEG00000007889	-	78	37.302	ENSAPEG00000022774	-	92	37.302
ENSAPEG00000007889	-	78	43.590	ENSAPEG00000015310	-	55	42.982
ENSAPEG00000007889	-	77	38.095	ENSAPEG00000012470	-	66	37.220
ENSAPEG00000007889	-	75	42.529	ENSAPEG00000004189	-	67	40.876
ENSAPEG00000007889	-	75	41.026	ENSAPEG00000013585	-	81	52.564
ENSAPEG00000007889	-	83	34.940	ENSAPEG00000002585	-	90	37.387
ENSAPEG00000007889	-	91	34.783	ENSAPEG00000000344	znf319b	79	34.783
ENSAPEG00000007889	-	73	33.871	ENSAPEG00000018271	-	65	32.308
ENSAPEG00000007889	-	86	44.706	ENSAPEG00000012963	-	72	36.691
ENSAPEG00000007889	-	75	37.815	ENSAPEG00000018316	-	50	37.815
ENSAPEG00000007889	-	94	39.918	ENSAPEG00000013031	-	97	39.918
ENSAPEG00000007889	-	81	38.211	ENSAPEG00000009383	-	76	36.967
ENSAPEG00000007889	-	76	37.931	ENSAPEG00000009381	-	55	37.368
ENSAPEG00000007889	-	79	43.128	ENSAPEG00000012443	-	74	41.872
ENSAPEG00000007889	-	83	44.444	ENSAPEG00000009515	-	88	44.444
ENSAPEG00000007889	-	79	38.889	ENSAPEG00000014848	-	99	38.889
ENSAPEG00000007889	-	75	37.143	ENSAPEG00000002983	snai2	56	37.143
ENSAPEG00000007889	-	78	35.200	ENSAPEG00000014539	gfi1aa	58	37.615
ENSAPEG00000007889	-	80	33.981	ENSAPEG00000005678	-	64	36.496
ENSAPEG00000007889	-	88	38.095	ENSAPEG00000009997	-	66	39.744
ENSAPEG00000007889	-	93	42.735	ENSAPEG00000013550	-	97	38.342
ENSAPEG00000007889	-	76	35.521	ENSAPEG00000002558	-	80	36.478
ENSAPEG00000007889	-	79	38.053	ENSAPEG00000006584	-	52	36.620
ENSAPEG00000007889	-	74	36.364	ENSAPEG00000022558	scrt2	50	36.364
ENSAPEG00000007889	-	73	33.480	ENSAPEG00000012599	-	93	37.037
ENSAPEG00000007889	-	91	37.037	ENSAPEG00000004692	-	54	40.206
ENSAPEG00000007889	-	76	35.000	ENSAPEG00000019527	-	67	35.000
ENSAPEG00000007889	-	78	41.558	ENSAPEG00000014415	-	79	41.558
ENSAPEG00000007889	-	74	40.000	ENSAPEG00000013105	-	56	36.283
ENSAPEG00000007889	-	78	36.866	ENSAPEG00000021575	-	59	41.509
ENSAPEG00000007889	-	91	39.592	ENSAPEG00000010438	-	98	41.341
ENSAPEG00000007889	-	85	38.571	ENSAPEG00000016483	-	64	38.571
ENSAPEG00000007889	-	75	32.479	ENSAPEG00000003528	zbtb41	61	31.548
ENSAPEG00000007889	-	88	39.806	ENSAPEG00000009835	-	92	43.478
ENSAPEG00000007889	-	86	37.959	ENSAPEG00000003892	-	56	37.443
ENSAPEG00000007889	-	77	44.304	ENSAPEG00000003893	-	57	44.304
ENSAPEG00000007889	-	75	32.941	ENSAPEG00000018323	-	88	32.941
ENSAPEG00000007889	-	98	36.481	ENSAPEG00000004486	-	96	37.755
ENSAPEG00000007889	-	78	38.462	ENSAPEG00000013088	-	89	35.526
ENSAPEG00000007889	-	73	38.053	ENSAPEG00000002888	-	98	38.053
ENSAPEG00000007889	-	87	42.574	ENSAPEG00000011020	-	94	53.488
ENSAPEG00000007889	-	81	39.583	ENSAPEG00000005462	-	86	40.678
ENSAPEG00000007889	-	86	35.874	ENSAPEG00000001596	-	75	35.874
ENSAPEG00000007889	-	82	38.645	ENSAPEG00000020501	-	63	38.645
ENSAPEG00000007889	-	81	37.156	ENSAPEG00000015593	-	76	37.156
ENSAPEG00000007889	-	87	37.600	ENSAPEG00000016536	-	80	37.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000007889	-	61	48.649	ENSACIG00000017166	-	53	48.649	Amphilophus_citrinellus
ENSAPEG00000007889	-	99	64.586	ENSAOCG00000011236	-	100	64.586	Amphiprion_ocellaris
ENSAPEG00000007889	-	68	43.836	ENSAOCG00000018579	-	70	43.750	Amphiprion_ocellaris
ENSAPEG00000007889	-	100	99.238	ENSAOCG00000011223	-	100	99.238	Amphiprion_ocellaris
ENSAPEG00000007889	-	86	74.126	ENSATEG00000011955	-	100	55.226	Anabas_testudineus
ENSAPEG00000007889	-	81	41.441	ENSCING00000004861	zf(c2h2)-12	74	41.441	Ciona_intestinalis
ENSAPEG00000007889	-	80	31.933	ENSCING00000000529	zf(btb/c2h2)	58	31.933	Ciona_intestinalis
ENSAPEG00000007889	-	75	32.766	ENSCING00000005713	-	72	32.766	Ciona_intestinalis
ENSAPEG00000007889	-	74	36.000	ENSCING00000003384	-	96	36.000	Ciona_intestinalis
ENSAPEG00000007889	-	81	39.640	ENSCSAVG00000005896	-	74	39.640	Ciona_savignyi
ENSAPEG00000007889	-	90	36.279	ENSCSAVG00000009574	-	99	36.279	Ciona_savignyi
ENSAPEG00000007889	-	73	40.741	ENSCSAVG00000003895	-	100	40.741	Ciona_savignyi
ENSAPEG00000007889	-	81	37.838	ENSCSAVG00000006729	-	76	37.838	Ciona_savignyi
ENSAPEG00000007889	-	82	34.211	ENSCSEG00000005491	-	87	34.211	Cynoglossus_semilaevis
ENSAPEG00000007889	-	99	43.560	ENSCVAG00000009534	-	76	42.507	Cyprinodon_variegatus
ENSAPEG00000007889	-	71	41.111	ENSCVAG00000002502	-	95	41.111	Cyprinodon_variegatus
ENSAPEG00000007889	-	84	36.905	ENSCVAG00000002295	-	83	36.052	Cyprinodon_variegatus
ENSAPEG00000007889	-	85	36.214	ENSCVAG00000016098	-	97	36.214	Cyprinodon_variegatus
ENSAPEG00000007889	-	73	35.238	FBgn0037722	CG8319	58	35.238	Drosophila_melanogaster
ENSAPEG00000007889	-	76	42.667	FBgn0033934	CG17385	81	43.836	Drosophila_melanogaster
ENSAPEG00000007889	-	88	45.263	ENSEBUG00000004841	-	82	45.263	Eptatretus_burgeri
ENSAPEG00000007889	-	84	43.038	ENSEBUG00000008392	-	74	43.114	Eptatretus_burgeri
ENSAPEG00000007889	-	84	42.647	ENSEBUG00000000735	-	98	42.262	Eptatretus_burgeri
ENSAPEG00000007889	-	90	42.793	ENSEBUG00000015522	-	71	42.081	Eptatretus_burgeri
ENSAPEG00000007889	-	62	55.556	ENSELUG00000014586	-	95	55.556	Esox_lucius
ENSAPEG00000007889	-	81	36.879	ENSELUG00000020794	-	65	36.879	Esox_lucius
ENSAPEG00000007889	-	78	40.625	ENSFHEG00000013644	-	77	39.759	Fundulus_heteroclitus
ENSAPEG00000007889	-	88	40.708	ENSFHEG00000012990	-	92	39.264	Fundulus_heteroclitus
ENSAPEG00000007889	-	74	37.190	ENSFHEG00000020889	-	74	37.190	Fundulus_heteroclitus
ENSAPEG00000007889	-	90	36.818	ENSFHEG00000003596	-	72	36.818	Fundulus_heteroclitus
ENSAPEG00000007889	-	73	34.783	ENSGACG00000018415	-	99	35.870	Gasterosteus_aculeatus
ENSAPEG00000007889	-	72	35.887	ENSHCOG00000017437	-	70	36.047	Hippocampus_comes
ENSAPEG00000007889	-	82	33.094	ENSHCOG00000008181	-	77	33.094	Hippocampus_comes
ENSAPEG00000007889	-	90	34.615	ENSHCOG00000014881	-	70	36.957	Hippocampus_comes
ENSAPEG00000007889	-	78	32.184	ENSHCOG00000014887	-	59	34.783	Hippocampus_comes
ENSAPEG00000007889	-	71	37.500	ENSHCOG00000001313	-	50	37.500	Hippocampus_comes
ENSAPEG00000007889	-	77	46.875	ENSIPUG00000009727	-	58	46.734	Ictalurus_punctatus
ENSAPEG00000007889	-	80	45.522	ENSIPUG00000013526	-	74	45.522	Ictalurus_punctatus
ENSAPEG00000007889	-	78	33.083	ENSKMAG00000007658	-	91	33.083	Kryptolebias_marmoratus
ENSAPEG00000007889	-	86	71.795	ENSKMAG00000011202	-	67	54.381	Kryptolebias_marmoratus
ENSAPEG00000007889	-	84	62.112	ENSKMAG00000011235	-	97	46.086	Kryptolebias_marmoratus
ENSAPEG00000007889	-	86	63.492	ENSKMAG00000011226	-	99	45.038	Kryptolebias_marmoratus
ENSAPEG00000007889	-	77	37.327	ENSKMAG00000012909	-	82	35.146	Kryptolebias_marmoratus
ENSAPEG00000007889	-	71	71.951	ENSMMOG00000001961	-	96	75.926	Mola_mola
ENSAPEG00000007889	-	86	84.921	ENSMALG00000017354	-	97	58.272	Monopterus_albus
ENSAPEG00000007889	-	76	35.455	ENSONIG00000003224	-	99	35.455	Oreochromis_niloticus
ENSAPEG00000007889	-	79	34.392	ENSONIG00000003471	-	97	40.000	Oreochromis_niloticus
ENSAPEG00000007889	-	75	72.650	ENSONIG00000009894	-	97	75.806	Oreochromis_niloticus
ENSAPEG00000007889	-	86	39.556	ENSONIG00000007812	-	100	39.024	Oreochromis_niloticus
ENSAPEG00000007889	-	93	34.483	ENSONIG00000016416	-	99	33.476	Oreochromis_niloticus
ENSAPEG00000007889	-	72	31.646	ENSORLG00015018254	-	90	33.613	Oryzias_latipes_hsok
ENSAPEG00000007889	-	79	35.169	ENSOMEG00000017673	-	71	35.169	Oryzias_melastigma
ENSAPEG00000007889	-	84	33.333	ENSPMGG00000010563	-	74	33.333	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	74	33.080	ENSPMGG00000000218	-	67	40.602	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	84	32.847	ENSPMGG00000000243	-	78	40.698	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	82	46.067	ENSPMGG00000000458	-	96	38.255	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	88	37.234	ENSPMGG00000000489	-	91	37.234	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	86	39.655	ENSPMGG00000022524	-	94	48.148	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	81	46.053	ENSPMGG00000010664	-	91	46.053	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	88	50.694	ENSPMGG00000019842	-	97	44.853	Periophthalmus_magnuspinnatus
ENSAPEG00000007889	-	76	39.759	ENSPMAG00000007983	-	98	39.759	Petromyzon_marinus
ENSAPEG00000007889	-	79	38.767	ENSPFOG00000002879	-	99	38.849	Poecilia_formosa
ENSAPEG00000007889	-	74	37.662	ENSPFOG00000020691	-	81	37.805	Poecilia_formosa
ENSAPEG00000007889	-	78	45.098	ENSPLAG00000011254	-	55	45.098	Poecilia_latipinna
ENSAPEG00000007889	-	85	34.211	ENSPLAG00000006174	-	71	36.441	Poecilia_latipinna
ENSAPEG00000007889	-	76	38.565	ENSPMEG00000022676	-	99	38.565	Poecilia_mexicana
ENSAPEG00000007889	-	75	75.000	ENSPMEG00000021927	-	100	60.674	Poecilia_mexicana
ENSAPEG00000007889	-	78	36.364	ENSPMEG00000019229	-	66	39.264	Poecilia_mexicana
ENSAPEG00000007889	-	82	45.098	ENSPMEG00000007503	-	56	45.098	Poecilia_mexicana
ENSAPEG00000007889	-	77	35.909	ENSPREG00000007146	-	66	38.650	Poecilia_reticulata
ENSAPEG00000007889	-	99	41.333	ENSPREG00000016204	-	68	32.883	Poecilia_reticulata
ENSAPEG00000007889	-	82	45.098	ENSPREG00000015352	-	65	45.098	Poecilia_reticulata
ENSAPEG00000007889	-	88	33.333	ENSPNAG00000025211	-	71	33.333	Pygocentrus_nattereri
ENSAPEG00000007889	-	92	72.727	ENSSMAG00000000404	-	82	72.727	Scophthalmus_maximus
ENSAPEG00000007889	-	95	69.697	ENSSDUG00000009314	-	100	55.365	Seriola_dumerili
ENSAPEG00000007889	-	96	37.118	ENSSDUG00000000946	-	99	39.791	Seriola_dumerili
ENSAPEG00000007889	-	95	67.879	ENSSDUG00000009322	-	100	55.742	Seriola_dumerili
ENSAPEG00000007889	-	86	30.894	ENSSLDG00000000464	-	69	30.894	Seriola_lalandi_dorsalis
ENSAPEG00000007889	-	61	48.000	ENSSLDG00000002515	-	60	48.000	Seriola_lalandi_dorsalis
ENSAPEG00000007889	-	86	77.372	ENSSLDG00000012635	-	100	55.937	Seriola_lalandi_dorsalis
ENSAPEG00000007889	-	83	76.761	ENSSPAG00000009405	-	88	73.504	Stegastes_partitus
ENSAPEG00000007889	-	90	37.324	ENSTNIG00000008154	-	100	37.324	Tetraodon_nigroviridis
ENSAPEG00000007889	-	80	45.631	ENSXMAG00000022242	-	69	45.631	Xiphophorus_maculatus