EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000007910 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 15142 bases
Position: chr10:20797420-20812561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000011016	zf-C2H2	PF00096.26	4.4e-13	1	3
ENSAPEP00000011016	zf-C2H2	PF00096.26	4.4e-13	2	3
ENSAPEP00000011016	zf-C2H2	PF00096.26	4.4e-13	3	3
ENSAPEP00000011021	zf-C2H2	PF00096.26	4.4e-13	1	3
ENSAPEP00000011021	zf-C2H2	PF00096.26	4.4e-13	2	3
ENSAPEP00000011021	zf-C2H2	PF00096.26	4.4e-13	3	3
ENSAPEP00000011027	zf-C2H2	PF00096.26	2.3e-11	1	3
ENSAPEP00000011027	zf-C2H2	PF00096.26	2.3e-11	2	3
ENSAPEP00000011027	zf-C2H2	PF00096.26	2.3e-11	3	3
ENSAPEP00000011016	zf-met	PF12874.7	1.2e-07	1	2
ENSAPEP00000011016	zf-met	PF12874.7	1.2e-07	2	2
ENSAPEP00000011021	zf-met	PF12874.7	1.2e-07	1	2
ENSAPEP00000011021	zf-met	PF12874.7	1.2e-07	2	2
ENSAPEP00000011027	zf-met	PF12874.7	3.9e-07	1	2
ENSAPEP00000011027	zf-met	PF12874.7	3.9e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000011318	-	4461	-	ENSAPEP00000011016	554 (aa)	-	-
ENSAPET00000011324	-	4399	-	ENSAPEP00000011021	554 (aa)	-	-
ENSAPET00000011330	-	4302	-	ENSAPEP00000011027	685 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000007910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000007910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000007910	-	50	35.678	ENSAPEG00000009383	-	83	35.233
ENSAPEG00000007910	-	51	38.500	ENSAPEG00000001596	-	84	38.500
ENSAPEG00000007910	-	50	36.986	ENSAPEG00000007389	-	76	49.315
ENSAPEG00000007910	-	58	38.824	ENSAPEG00000013031	-	78	38.824
ENSAPEG00000007910	-	57	31.429	ENSAPEG00000001556	-	61	36.559
ENSAPEG00000007910	-	100	64.441	ENSAPEG00000007889	-	99	64.441
ENSAPEG00000007910	-	50	38.272	ENSAPEG00000006650	-	93	41.053
ENSAPEG00000007910	-	56	46.154	ENSAPEG00000019026	znf236	51	46.154
ENSAPEG00000007910	-	55	36.628	ENSAPEG00000016536	-	72	36.628
ENSAPEG00000007910	-	58	42.553	ENSAPEG00000013550	-	86	52.459
ENSAPEG00000007910	-	52	44.643	ENSAPEG00000006358	znf341	60	44.643
ENSAPEG00000007910	-	52	37.576	ENSAPEG00000021575	-	59	37.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000007910	-	100	97.522	ENSAOCG00000011236	-	100	97.522	Amphiprion_ocellaris
ENSAPEG00000007910	-	100	64.731	ENSAOCG00000011223	-	99	64.731	Amphiprion_ocellaris
ENSAPEG00000007910	-	100	51.264	ENSATEG00000011955	-	100	49.930	Anabas_testudineus
ENSAPEG00000007910	-	50	33.133	ENSCING00000004861	zf(c2h2)-12	70	33.133	Ciona_intestinalis
ENSAPEG00000007910	-	52	39.200	ENSCSAVG00000009574	-	100	37.037	Ciona_savignyi
ENSAPEG00000007910	-	52	32.597	ENSCSAVG00000006729	-	74	32.597	Ciona_savignyi
ENSAPEG00000007910	-	56	32.353	ENSCSEG00000005491	-	72	30.769	Cynoglossus_semilaevis
ENSAPEG00000007910	-	99	40.537	ENSCVAG00000009534	-	76	41.036	Cyprinodon_variegatus
ENSAPEG00000007910	-	53	36.134	ENSHCOG00000014881	-	68	34.066	Hippocampus_comes
ENSAPEG00000007910	-	94	43.243	ENSKMAG00000011235	-	95	42.342	Kryptolebias_marmoratus
ENSAPEG00000007910	-	66	44.384	ENSKMAG00000011202	-	67	45.897	Kryptolebias_marmoratus
ENSAPEG00000007910	-	93	45.137	ENSKMAG00000011226	-	99	45.510	Kryptolebias_marmoratus
ENSAPEG00000007910	-	99	52.585	ENSMALG00000017354	-	100	51.336	Monopterus_albus
ENSAPEG00000007910	-	61	35.780	ENSONIG00000007812	-	98	37.436	Oreochromis_niloticus
ENSAPEG00000007910	-	50	37.302	ENSONIG00000016416	-	97	37.302	Oreochromis_niloticus
ENSAPEG00000007910	-	52	31.959	ENSPMGG00000022524	-	90	45.882	Periophthalmus_magnuspinnatus
ENSAPEG00000007910	-	52	31.765	ENSPMGG00000000218	-	58	36.449	Periophthalmus_magnuspinnatus
ENSAPEG00000007910	-	55	35.838	ENSPMGG00000010563	-	90	35.838	Periophthalmus_magnuspinnatus
ENSAPEG00000007910	-	85	50.689	ENSPMEG00000021927	-	98	50.413	Poecilia_mexicana
ENSAPEG00000007910	-	51	38.182	ENSPREG00000007146	-	54	38.182	Poecilia_reticulata
ENSAPEG00000007910	-	50	65.278	ENSSMAG00000000404	-	88	63.750	Scophthalmus_maximus
ENSAPEG00000007910	-	100	51.120	ENSSDUG00000009322	-	99	51.397	Seriola_dumerili
ENSAPEG00000007910	-	100	51.709	ENSSDUG00000009314	-	100	52.354	Seriola_dumerili
ENSAPEG00000007910	-	100	51.709	ENSSLDG00000012635	-	100	52.496	Seriola_lalandi_dorsalis
ENSAPEG00000007910	-	64	56.215	ENSSPAG00000009405	-	88	56.215	Stegastes_partitus