EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000008011 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 31305 bases
Position: chr24:18647479-18678783
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000011160	KH_1	PF00013.29	2e-54	1	3
ENSAPEP00000011160	KH_1	PF00013.29	2e-54	2	3
ENSAPEP00000011160	KH_1	PF00013.29	2e-54	3	3
ENSAPEP00000011175	KH_1	PF00013.29	2e-54	1	3
ENSAPEP00000011175	KH_1	PF00013.29	2e-54	2	3
ENSAPEP00000011175	KH_1	PF00013.29	2e-54	3	3
ENSAPEP00000011160	KH_2	PF07650.17	6e-14	1	1
ENSAPEP00000011175	KH_2	PF07650.17	6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000011479	-	5621	-	ENSAPEP00000011175	352 (aa)	-	UPI000444281C
ENSAPET00000011464	-	5266	-	ENSAPEP00000011160	352 (aa)	-	UPI000444281C

Gene Model

Click here to download ENSAPEG00000008011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000008011	pcbp3	95	32.877	ENSAPEG00000021612	igf2bp1	59	32.877
ENSAPEG00000008011	pcbp3	90	62.333	ENSAPEG00000023157	pcbp4	93	56.569
ENSAPEG00000008011	pcbp3	91	35.000	ENSAPEG00000016037	igf2bp2a	65	35.000
ENSAPEG00000008011	pcbp3	63	42.188	ENSAPEG00000013411	khsrp	62	42.188
ENSAPEG00000008011	pcbp3	98	67.919	ENSAPEG00000000729	zgc:110045	75	67.919
ENSAPEG00000008011	pcbp3	60	39.394	ENSAPEG00000008575	KHSRP	66	39.394
ENSAPEG00000008011	pcbp3	88	37.500	ENSAPEG00000015125	fubp3	66	36.923
ENSAPEG00000008011	pcbp3	94	72.892	ENSAPEG00000017523	pcbp2	96	72.892
ENSAPEG00000008011	pcbp3	95	88.095	ENSAPEG00000005209	-	97	88.095
ENSAPEG00000008011	pcbp3	84	59.809	ENSAPEG00000009555	-	79	59.809
ENSAPEG00000008011	pcbp3	72	48.649	ENSAPEG00000019850	hnrpkl	56	48.649
ENSAPEG00000008011	pcbp3	60	36.364	ENSAPEG00000012232	fubp1	53	36.364
ENSAPEG00000008011	pcbp3	63	38.235	ENSAPEG00000016133	-	81	32.558
ENSAPEG00000008011	pcbp3	94	72.059	ENSAPEG00000008226	PCBP2	96	72.059
ENSAPEG00000008011	pcbp3	68	55.556	ENSAPEG00000003191	hnrnpk	54	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008011	pcbp3	100	90.909	ENSAPOG00000016582	-	100	90.909	Acanthochromis_polyacanthus
ENSAPEG00000008011	pcbp3	95	90.149	ENSAPOG00000020003	pcbp3	86	90.149	Acanthochromis_polyacanthus
ENSAPEG00000008011	pcbp3	93	87.021	ENSAMEG00000001697	-	96	87.021	Ailuropoda_melanoleuca
ENSAPEG00000008011	pcbp3	95	88.690	ENSACIG00000002739	-	97	88.690	Amphilophus_citrinellus
ENSAPEG00000008011	pcbp3	100	96.591	ENSACIG00000010933	pcbp3	100	96.591	Amphilophus_citrinellus
ENSAPEG00000008011	pcbp3	97	90.936	ENSAOCG00000008592	-	100	90.936	Amphiprion_ocellaris
ENSAPEG00000008011	pcbp3	91	85.621	ENSAOCG00000007806	-	97	85.621	Amphiprion_ocellaris
ENSAPEG00000008011	pcbp3	95	97.015	ENSATEG00000015787	-	100	97.015	Anabas_testudineus
ENSAPEG00000008011	pcbp3	95	87.798	ENSATEG00000009833	-	97	87.798	Anabas_testudineus
ENSAPEG00000008011	pcbp3	98	77.507	ENSAPLG00000008951	-	82	77.507	Anas_platyrhynchos
ENSAPEG00000008011	pcbp3	93	85.924	ENSAPLG00000002975	-	95	85.924	Anas_platyrhynchos
ENSAPEG00000008011	pcbp3	93	91.066	ENSACAG00000004607	-	96	91.066	Anolis_carolinensis
ENSAPEG00000008011	pcbp3	93	86.322	ENSACAG00000009819	-	95	86.322	Anolis_carolinensis
ENSAPEG00000008011	pcbp3	91	87.454	ENSANAG00000030702	-	96	87.454	Aotus_nancymaae
ENSAPEG00000008011	pcbp3	100	99.148	ENSACLG00000011835	pcbp3	100	99.148	Astatotilapia_calliptera
ENSAPEG00000008011	pcbp3	100	90.341	ENSACLG00000003801	-	100	90.341	Astatotilapia_calliptera
ENSAPEG00000008011	pcbp3	95	85.373	ENSAMXG00000013588	-	100	85.373	Astyanax_mexicanus
ENSAPEG00000008011	pcbp3	100	96.875	ENSAMXG00000003440	pcbp3	100	96.875	Astyanax_mexicanus
ENSAPEG00000008011	pcbp3	94	64.387	ENSAMXG00000001760	zgc:110045	73	64.387	Astyanax_mexicanus
ENSAPEG00000008011	pcbp3	88	87.302	ENSCAFG00020019472	-	81	87.302	Canis_lupus_dingo
ENSAPEG00000008011	pcbp3	93	88.754	ENSCSAG00000007440	-	87	88.754	Chlorocebus_sabaeus
ENSAPEG00000008011	pcbp3	98	85.507	ENSCPBG00000012151	-	95	85.507	Chrysemys_picta_bellii
ENSAPEG00000008011	pcbp3	98	87.204	ENSCPBG00000000733	-	72	87.204	Chrysemys_picta_bellii
ENSAPEG00000008011	pcbp3	95	72.500	ENSCSEG00000016984	-	97	74.906	Cynoglossus_semilaevis
ENSAPEG00000008011	pcbp3	95	88.358	ENSCSEG00000000822	pcbp3	99	88.358	Cynoglossus_semilaevis
ENSAPEG00000008011	pcbp3	100	99.716	ENSCVAG00000014482	pcbp3	100	99.716	Cyprinodon_variegatus
ENSAPEG00000008011	pcbp3	100	90.341	ENSCVAG00000005262	-	100	90.341	Cyprinodon_variegatus
ENSAPEG00000008011	pcbp3	100	97.159	ENSDARG00000054378	pcbp3	100	97.159	Danio_rerio
ENSAPEG00000008011	pcbp3	93	75.380	ENSETEG00000015988	-	95	75.380	Echinops_telfairi
ENSAPEG00000008011	pcbp3	91	68.836	ENSEBUG00000016192	pcbp3	99	68.836	Eptatretus_burgeri
ENSAPEG00000008011	pcbp3	95	74.041	ENSEBUG00000007485	-	92	73.967	Eptatretus_burgeri
ENSAPEG00000008011	pcbp3	70	67.470	ENSEBUG00000005495	pcbp3	68	67.470	Eptatretus_burgeri
ENSAPEG00000008011	pcbp3	100	98.023	ENSELUG00000003521	pcbp3	100	98.023	Esox_lucius
ENSAPEG00000008011	pcbp3	100	90.625	ENSELUG00000001560	-	100	82.920	Esox_lucius
ENSAPEG00000008011	pcbp3	93	88.450	ENSFALG00000003949	-	95	88.450	Ficedula_albicollis
ENSAPEG00000008011	pcbp3	98	77.778	ENSFALG00000004411	-	77	77.778	Ficedula_albicollis
ENSAPEG00000008011	pcbp3	95	87.500	ENSFHEG00000006539	-	97	87.500	Fundulus_heteroclitus
ENSAPEG00000008011	pcbp3	97	88.304	ENSFHEG00000016615	pcbp3	97	88.304	Fundulus_heteroclitus
ENSAPEG00000008011	pcbp3	95	67.139	ENSGMOG00000008611	-	100	67.139	Gadus_morhua
ENSAPEG00000008011	pcbp3	95	76.404	ENSGMOG00000011992	pcbp3	96	76.471	Gadus_morhua
ENSAPEG00000008011	pcbp3	93	88.184	ENSGALG00000004394	-	96	88.184	Gallus_gallus
ENSAPEG00000008011	pcbp3	93	86.544	ENSGALG00000013155	-	98	83.587	Gallus_gallus
ENSAPEG00000008011	pcbp3	100	90.341	ENSGAFG00000010274	-	100	90.341	Gambusia_affinis
ENSAPEG00000008011	pcbp3	95	95.224	ENSGAFG00000011430	pcbp3	96	95.224	Gambusia_affinis
ENSAPEG00000008011	pcbp3	96	84.463	ENSGACG00000002266	-	97	84.463	Gasterosteus_aculeatus
ENSAPEG00000008011	pcbp3	95	83.853	ENSGACG00000014955	-	97	83.853	Gasterosteus_aculeatus
ENSAPEG00000008011	pcbp3	94	80.608	ENSGAGG00000000271	-	100	80.822	Gopherus_agassizii
ENSAPEG00000008011	pcbp3	76	88.263	ENSGAGG00000006956	-	86	88.263	Gopherus_agassizii
ENSAPEG00000008011	pcbp3	100	90.341	ENSHBUG00000021782	-	100	90.341	Haplochromis_burtoni
ENSAPEG00000008011	pcbp3	100	99.148	ENSHBUG00000010697	pcbp3	100	99.148	Haplochromis_burtoni
ENSAPEG00000008011	pcbp3	100	99.432	ENSHCOG00000017868	pcbp3	100	99.432	Hippocampus_comes
ENSAPEG00000008011	pcbp3	95	85.417	ENSHCOG00000006067	-	97	85.417	Hippocampus_comes
ENSAPEG00000008011	pcbp3	95	95.833	ENSIPUG00000006238	pcbp3	97	95.833	Ictalurus_punctatus
ENSAPEG00000008011	pcbp3	100	99.716	ENSKMAG00000003046	pcbp3	100	99.716	Kryptolebias_marmoratus
ENSAPEG00000008011	pcbp3	100	89.489	ENSKMAG00000018530	-	100	89.489	Kryptolebias_marmoratus
ENSAPEG00000008011	pcbp3	96	89.053	ENSLBEG00000006201	pcbp3	96	89.053	Labrus_bergylta
ENSAPEG00000008011	pcbp3	100	77.273	ENSLBEG00000006542	-	100	79.545	Labrus_bergylta
ENSAPEG00000008011	pcbp3	98	77.596	ENSLACG00000010804	zgc:110045	77	77.596	Latimeria_chalumnae
ENSAPEG00000008011	pcbp3	97	85.753	ENSLACG00000010386	pcbp3	77	85.753	Latimeria_chalumnae
ENSAPEG00000008011	pcbp3	93	85.714	ENSLOCG00000005058	zgc:110045	80	85.714	Lepisosteus_oculatus
ENSAPEG00000008011	pcbp3	93	95.745	ENSLOCG00000009369	pcbp3	96	95.745	Lepisosteus_oculatus
ENSAPEG00000008011	pcbp3	95	86.607	ENSMAMG00000011620	-	97	86.607	Mastacembelus_armatus
ENSAPEG00000008011	pcbp3	95	89.851	ENSMAMG00000022336	pcbp3	93	89.851	Mastacembelus_armatus
ENSAPEG00000008011	pcbp3	100	96.307	ENSMZEG00005008993	pcbp3	100	96.307	Maylandia_zebra
ENSAPEG00000008011	pcbp3	100	86.932	ENSMZEG00005014882	-	100	87.042	Maylandia_zebra
ENSAPEG00000008011	pcbp3	94	80.460	ENSMGAG00000001883	-	96	80.460	Meleagris_gallopavo
ENSAPEG00000008011	pcbp3	98	77.778	ENSMGAG00000006794	-	77	77.778	Meleagris_gallopavo
ENSAPEG00000008011	pcbp3	95	89.021	ENSMMOG00000000730	pcbp3	88	89.021	Mola_mola
ENSAPEG00000008011	pcbp3	95	87.202	ENSMMOG00000005216	-	97	87.202	Mola_mola
ENSAPEG00000008011	pcbp3	72	86.449	ENSMODG00000027884	-	93	86.449	Monodelphis_domestica
ENSAPEG00000008011	pcbp3	100	97.159	ENSMALG00000000691	pcbp3	100	97.159	Monopterus_albus
ENSAPEG00000008011	pcbp3	93	78.386	ENSMPUG00000001779	-	88	78.386	Mustela_putorius_furo
ENSAPEG00000008011	pcbp3	100	96.307	ENSNBRG00000016409	-	100	96.307	Neolamprologus_brichardi
ENSAPEG00000008011	pcbp3	100	89.385	ENSNBRG00000016714	-	100	89.385	Neolamprologus_brichardi
ENSAPEG00000008011	pcbp3	93	87.826	ENSOPRG00000003431	-	99	87.826	Ochotona_princeps
ENSAPEG00000008011	pcbp3	95	94.051	ENSONIG00000012122	-	98	94.051	Oreochromis_niloticus
ENSAPEG00000008011	pcbp3	95	89.583	ENSONIG00000004611	-	97	89.583	Oreochromis_niloticus
ENSAPEG00000008011	pcbp3	93	88.146	ENSOCUG00000002696	-	87	88.146	Oryctolagus_cuniculus
ENSAPEG00000008011	pcbp3	95	92.537	ENSORLG00000000059	pcbp3	100	92.537	Oryzias_latipes
ENSAPEG00000008011	pcbp3	99	89.744	ENSORLG00000022739	-	99	89.744	Oryzias_latipes
ENSAPEG00000008011	pcbp3	99	89.459	ENSORLG00020006124	-	99	89.459	Oryzias_latipes_hni
ENSAPEG00000008011	pcbp3	95	92.537	ENSORLG00020012671	pcbp3	97	92.537	Oryzias_latipes_hni
ENSAPEG00000008011	pcbp3	95	92.537	ENSORLG00015000429	pcbp3	97	92.537	Oryzias_latipes_hsok
ENSAPEG00000008011	pcbp3	99	89.744	ENSORLG00015008051	-	99	89.744	Oryzias_latipes_hsok
ENSAPEG00000008011	pcbp3	91	90.523	ENSOMEG00000020811	pcbp3	97	90.523	Oryzias_melastigma
ENSAPEG00000008011	pcbp3	95	89.286	ENSOMEG00000020162	-	97	89.286	Oryzias_melastigma
ENSAPEG00000008011	pcbp3	93	82.486	ENSOGAG00000008044	-	96	82.486	Otolemur_garnettii
ENSAPEG00000008011	pcbp3	100	89.773	ENSPKIG00000019329	pcbp3	100	89.773	Paramormyrops_kingsleyae
ENSAPEG00000008011	pcbp3	76	79.524	ENSPKIG00000020913	-	91	79.524	Paramormyrops_kingsleyae
ENSAPEG00000008011	pcbp3	94	80.608	ENSPSIG00000008350	-	72	80.608	Pelodiscus_sinensis
ENSAPEG00000008011	pcbp3	93	77.616	ENSPSIG00000014970	-	95	78.198	Pelodiscus_sinensis
ENSAPEG00000008011	pcbp3	100	98.580	ENSPMGG00000022383	pcbp3	100	98.580	Periophthalmus_magnuspinnatus
ENSAPEG00000008011	pcbp3	69	89.362	ENSPMAG00000004637	-	97	89.362	Petromyzon_marinus
ENSAPEG00000008011	pcbp3	95	68.843	ENSPMAG00000004551	pcbp3	90	68.843	Petromyzon_marinus
ENSAPEG00000008011	pcbp3	93	95.441	ENSPCIG00000028092	-	96	95.441	Phascolarctos_cinereus
ENSAPEG00000008011	pcbp3	94	84.548	ENSPLAG00000004074	-	89	84.548	Poecilia_latipinna
ENSAPEG00000008011	pcbp3	100	84.000	ENSPLAG00000011449	pcbp3	100	84.000	Poecilia_latipinna
ENSAPEG00000008011	pcbp3	100	98.592	ENSPMEG00000021239	pcbp3	100	98.592	Poecilia_mexicana
ENSAPEG00000008011	pcbp3	100	88.068	ENSPMEG00000006653	-	100	88.068	Poecilia_mexicana
ENSAPEG00000008011	pcbp3	95	87.202	ENSPREG00000020585	-	97	87.202	Poecilia_reticulata
ENSAPEG00000008011	pcbp3	95	88.131	ENSPREG00000015736	pcbp3	99	88.131	Poecilia_reticulata
ENSAPEG00000008011	pcbp3	95	89.851	ENSPNYG00000012326	pcbp3	95	89.851	Pundamilia_nyererei
ENSAPEG00000008011	pcbp3	95	87.202	ENSPNYG00000013205	-	97	87.202	Pundamilia_nyererei
ENSAPEG00000008011	pcbp3	100	94.051	ENSPNAG00000008541	-	100	94.051	Pygocentrus_nattereri
ENSAPEG00000008011	pcbp3	95	90.179	ENSPNAG00000015104	pcbp3	97	90.179	Pygocentrus_nattereri
ENSAPEG00000008011	pcbp3	93	88.754	ENSRNOG00000001245	Pcbp3	95	88.754	Rattus_norvegicus
ENSAPEG00000008011	pcbp3	93	79.666	ENSRBIG00000028177	-	96	79.666	Rhinopithecus_bieti
ENSAPEG00000008011	pcbp3	93	84.900	ENSSHAG00000007890	-	96	83.862	Sarcophilus_harrisii
ENSAPEG00000008011	pcbp3	100	94.602	ENSSFOG00015014706	pcbp3	100	94.602	Scleropages_formosus
ENSAPEG00000008011	pcbp3	100	90.341	ENSSFOG00015010205	pcbp3	100	94.328	Scleropages_formosus
ENSAPEG00000008011	pcbp3	93	78.287	ENSSFOG00015007118	-	93	78.287	Scleropages_formosus
ENSAPEG00000008011	pcbp3	100	90.057	ENSSMAG00000003135	-	100	90.057	Scophthalmus_maximus
ENSAPEG00000008011	pcbp3	95	90.149	ENSSMAG00000011929	pcbp3	97	90.149	Scophthalmus_maximus
ENSAPEG00000008011	pcbp3	95	97.313	ENSSDUG00000011608	pcbp3	99	97.313	Seriola_dumerili
ENSAPEG00000008011	pcbp3	100	89.205	ENSSDUG00000008502	-	100	89.205	Seriola_dumerili
ENSAPEG00000008011	pcbp3	95	97.313	ENSSLDG00000008518	pcbp3	99	97.313	Seriola_lalandi_dorsalis
ENSAPEG00000008011	pcbp3	100	90.909	ENSSLDG00000020161	-	100	90.909	Seriola_lalandi_dorsalis
ENSAPEG00000008011	pcbp3	91	84.880	ENSSPUG00000013214	-	91	84.880	Sphenodon_punctatus
ENSAPEG00000008011	pcbp3	91	85.621	ENSSPAG00000004190	-	97	85.621	Stegastes_partitus
ENSAPEG00000008011	pcbp3	100	86.364	ENSSPAG00000023341	-	100	86.364	Stegastes_partitus
ENSAPEG00000008011	pcbp3	93	81.268	ENSTGUG00000003316	-	96	81.268	Taeniopygia_guttata
ENSAPEG00000008011	pcbp3	93	82.675	ENSTGUG00000008158	-	96	82.675	Taeniopygia_guttata
ENSAPEG00000008011	pcbp3	91	89.109	ENSTRUG00000006280	-	89	89.109	Takifugu_rubripes
ENSAPEG00000008011	pcbp3	100	92.898	ENSTRUG00000013604	pcbp3	100	92.898	Takifugu_rubripes
ENSAPEG00000008011	pcbp3	93	88.473	ENSTTRG00000015075	-	96	88.473	Tursiops_truncatus
ENSAPEG00000008011	pcbp3	93	83.285	ENSXETG00000011483	pcbp1	96	83.285	Xenopus_tropicalis
ENSAPEG00000008011	pcbp3	95	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSAPEG00000008011	pcbp3	100	98.592	ENSXCOG00000020481	pcbp3	100	98.592	Xiphophorus_couchianus
ENSAPEG00000008011	pcbp3	100	100.000	ENSXMAG00000008175	pcbp3	100	100.000	Xiphophorus_maculatus
ENSAPEG00000008011	pcbp3	100	90.625	ENSXMAG00000028711	-	100	90.625	Xiphophorus_maculatus