EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000008201 (Gene tree)
Gene ID
-
Gene Symbol
lsm5 (1 of many)
Alias
YER146W
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Plus strand
Length
1556 bases
Position
chr22:6178387-6179942
Accession
ZDB-GENE-070822-23
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000011484LSMPF01423.222.7e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000011794-189-ENSAPEP0000001148462 (aa)-UPI0003EBF674
Gene Model
Click here to download ENSAPEG00000008201's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008201's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000008201lsm58436.538ENSAPEG00000015525snrpe5436.538
ENSAPEG00000008201lsm5100100.000ENSAPEG00000008151lsm568100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000008201lsm510096.774ENSG00000106355LSM510096.774Homo_sapiens
ENSAPEG00000008201lsm5100100.000ENSAPOG00000020779LSM568100.000Acanthochromis_polyacanthus
ENSAPEG00000008201lsm5100100.000ENSAPOG00000011743LSM5100100.000Acanthochromis_polyacanthus
ENSAPEG00000008201lsm510096.774ENSAMEG00000006700LSM56896.774Ailuropoda_melanoleuca
ENSAPEG00000008201lsm57395.556ENSACIG00000019185lsm58095.556Amphilophus_citrinellus
ENSAPEG00000008201lsm5100100.000ENSAOCG00000001636lsm568100.000Amphiprion_ocellaris
ENSAPEG00000008201lsm58598.113ENSATEG00000020470lsm57695.556Anabas_testudineus
ENSAPEG00000008201lsm59796.667ENSAPLG00000008171LSM58196.667Anas_platyrhynchos
ENSAPEG00000008201lsm510096.774ENSANAG00000034409-6896.774Aotus_nancymaae
ENSAPEG00000008201lsm510087.097ENSANAG00000037758-7787.097Aotus_nancymaae
ENSAPEG00000008201lsm510091.935ENSANAG00000024192-6591.935Aotus_nancymaae
ENSAPEG00000008201lsm5100100.000ENSACLG00000012891lsm570100.000Astatotilapia_calliptera
ENSAPEG00000008201lsm510080.000ENSAMXG00000035543lsm56980.000Astyanax_mexicanus
ENSAPEG00000008201lsm510096.774ENSBTAG00000002332LSM56896.774Bos_taurus
ENSAPEG00000008201lsm510077.419WBGene00003079lsm-56877.419Caenorhabditis_elegans
ENSAPEG00000008201lsm510083.871ENSCJAG00000005678-6983.871Callithrix_jacchus
ENSAPEG00000008201lsm510095.161ENSCAFG00000019261-6895.161Canis_familiaris
ENSAPEG00000008201lsm510096.774ENSCAFG00020004946LSM56896.774Canis_lupus_dingo
ENSAPEG00000008201lsm57373.333ENSCHIG00000021428-6369.492Capra_hircus
ENSAPEG00000008201lsm510096.774ENSCHIG00000024539LSM56896.774Capra_hircus
ENSAPEG00000008201lsm510093.548ENSCHIG00000004079-6893.548Capra_hircus
ENSAPEG00000008201lsm510096.774ENSTSYG00000006449-6896.774Carlito_syrichta
ENSAPEG00000008201lsm510087.097ENSTSYG00000026530-6787.097Carlito_syrichta
ENSAPEG00000008201lsm510064.516ENSTSYG00000036637-6064.516Carlito_syrichta
ENSAPEG00000008201lsm59289.474ENSTSYG00000028728-6789.474Carlito_syrichta
ENSAPEG00000008201lsm510088.710ENSCAPG00000006980LSM58388.710Cavia_aperea
ENSAPEG00000008201lsm510096.774ENSCPOG00000036386LSM57693.333Cavia_porcellus
ENSAPEG00000008201lsm510096.774ENSCCAG00000037808-6896.774Cebus_capucinus
ENSAPEG00000008201lsm510095.161ENSCCAG00000000821-6895.161Cebus_capucinus
ENSAPEG00000008201lsm59783.333ENSCCAG00000037334-7883.333Cebus_capucinus
ENSAPEG00000008201lsm510095.161ENSCCAG00000032123-6895.161Cebus_capucinus
ENSAPEG00000008201lsm510090.323ENSCCAG00000032792-7790.323Cebus_capucinus
ENSAPEG00000008201lsm510096.774ENSCATG00000040218LSM510096.774Cercocebus_atys
ENSAPEG00000008201lsm510082.258ENSCATG00000014790-6682.258Cercocebus_atys
ENSAPEG00000008201lsm510096.774ENSCLAG00000000202LSM57693.333Chinchilla_lanigera
ENSAPEG00000008201lsm59583.051ENSCLAG00000005062-5983.051Chinchilla_lanigera
ENSAPEG00000008201lsm57497.826ENSCHOG00000005335LSM56197.826Choloepus_hoffmanni
ENSAPEG00000008201lsm510096.774ENSCPBG00000013685LSM56896.774Chrysemys_picta_bellii
ENSAPEG00000008201lsm510087.097ENSCING00000020625-7087.097Ciona_intestinalis
ENSAPEG00000008201lsm510087.097ENSCSAVG00000001439-7087.097Ciona_savignyi
ENSAPEG00000008201lsm510096.774ENSCANG00000039909LSM510096.774Colobus_angolensis_palliatus
ENSAPEG00000008201lsm510096.774ENSCGRG00001015461Lsm57693.333Cricetulus_griseus_chok1gshd
ENSAPEG00000008201lsm510096.774ENSCGRG00000007677Lsm58396.774Cricetulus_griseus_crigri
ENSAPEG00000008201lsm57395.556ENSCSEG00000015286lsm57695.556Cynoglossus_semilaevis
ENSAPEG00000008201lsm5100100.000ENSCVAG00000004262lsm570100.000Cyprinodon_variegatus
ENSAPEG00000008201lsm510098.387ENSDARG00000071573lsm510098.387Danio_rerio
ENSAPEG00000008201lsm59486.207ENSDNOG00000049495-6386.207Dasypus_novemcinctus
ENSAPEG00000008201lsm510096.774ENSDNOG00000034958LSM56896.774Dasypus_novemcinctus
ENSAPEG00000008201lsm510096.774ENSDORG00000009422Lsm57693.333Dipodomys_ordii
ENSAPEG00000008201lsm59883.607FBgn0035675CG66106783.607Drosophila_melanogaster
ENSAPEG00000008201lsm510075.806ENSETEG00000010651-6675.806Echinops_telfairi
ENSAPEG00000008201lsm510075.806ENSETEG00000016074-8075.806Echinops_telfairi
ENSAPEG00000008201lsm510096.774ENSETEG00000018068LSM56896.774Echinops_telfairi
ENSAPEG00000008201lsm57973.469ENSETEG00000000777-5673.469Echinops_telfairi
ENSAPEG00000008201lsm510070.968ENSETEG00000001469-6370.968Echinops_telfairi
ENSAPEG00000008201lsm510093.548ENSEBUG00000008540lsm56893.548Eptatretus_burgeri
ENSAPEG00000008201lsm510096.774ENSEASG00005003500LSM56896.774Equus_asinus_asinus
ENSAPEG00000008201lsm510075.806ENSECAG00000018445LSM56575.806Equus_caballus
ENSAPEG00000008201lsm59491.379ENSEEUG00000004102LSM59791.379Erinaceus_europaeus
ENSAPEG00000008201lsm510098.387ENSELUG00000007792lsm56898.387Esox_lucius
ENSAPEG00000008201lsm510096.774ENSFCAG00000000230LSM56896.774Felis_catus
ENSAPEG00000008201lsm510096.774ENSFALG00000001892LSM57596.774Ficedula_albicollis
ENSAPEG00000008201lsm510096.774ENSFDAG00000008767LSM57693.333Fukomys_damarensis
ENSAPEG00000008201lsm510069.355ENSFDAG00000008685-7069.355Fukomys_damarensis
ENSAPEG00000008201lsm510085.484ENSFHEG00000004011lsm56685.484Fundulus_heteroclitus
ENSAPEG00000008201lsm598100.000ENSGMOG00000018235lsm568100.000Gadus_morhua
ENSAPEG00000008201lsm510096.774ENSGALG00000041625LSM56896.774Gallus_gallus
ENSAPEG00000008201lsm5100100.000ENSGAFG00000016824lsm5100100.000Gambusia_affinis
ENSAPEG00000008201lsm5100100.000ENSGACG00000005528lsm568100.000Gasterosteus_aculeatus
ENSAPEG00000008201lsm510096.774ENSGAGG00000015593LSM56896.774Gopherus_agassizii
ENSAPEG00000008201lsm510096.774ENSGGOG00000043469LSM56896.774Gorilla_gorilla
ENSAPEG00000008201lsm5100100.000ENSHBUG00000013773lsm570100.000Haplochromis_burtoni
ENSAPEG00000008201lsm510096.774ENSHGLG00000011765LSM57693.333Heterocephalus_glaber_female
ENSAPEG00000008201lsm510096.774ENSHGLG00100015610LSM57597.674Heterocephalus_glaber_male
ENSAPEG00000008201lsm57393.333ENSHCOG00000008288lsm57693.333Hippocampus_comes
ENSAPEG00000008201lsm510098.387ENSIPUG00000021095LSM56898.387Ictalurus_punctatus
ENSAPEG00000008201lsm510083.871ENSSTOG00000033886-7083.871Ictidomys_tridecemlineatus
ENSAPEG00000008201lsm510096.774ENSSTOG00000012662LSM57693.333Ictidomys_tridecemlineatus
ENSAPEG00000008201lsm510096.774ENSJJAG00000012145-7693.333Jaculus_jaculus
ENSAPEG00000008201lsm58192.000ENSJJAG00000004475-6392.000Jaculus_jaculus
ENSAPEG00000008201lsm510077.419ENSJJAG00000016144-7577.419Jaculus_jaculus
ENSAPEG00000008201lsm510098.387ENSKMAG00000021861lsm56898.387Kryptolebias_marmoratus
ENSAPEG00000008201lsm510096.774ENSLACG00000022448LSM56896.774Latimeria_chalumnae
ENSAPEG00000008201lsm510098.387ENSLOCG00000012903lsm56898.387Lepisosteus_oculatus
ENSAPEG00000008201lsm59484.483ENSLAFG00000027938-7384.483Loxodonta_africana
ENSAPEG00000008201lsm510096.774ENSLAFG00000029579LSM56896.774Loxodonta_africana
ENSAPEG00000008201lsm510095.161ENSMFAG00000030152-6895.161Macaca_fascicularis
ENSAPEG00000008201lsm510096.774ENSMFAG00000038508LSM56896.774Macaca_fascicularis
ENSAPEG00000008201lsm510095.161ENSMMUG00000030131-6895.161Macaca_mulatta
ENSAPEG00000008201lsm510083.871ENSMMUG00000039822-6683.871Macaca_mulatta
ENSAPEG00000008201lsm510095.161ENSMNEG00000037935-6895.161Macaca_nemestrina
ENSAPEG00000008201lsm510096.774ENSMNEG00000015331LSM510096.774Macaca_nemestrina
ENSAPEG00000008201lsm510082.258ENSMLEG00000034037-6782.258Mandrillus_leucophaeus
ENSAPEG00000008201lsm510096.774ENSMLEG00000024945LSM56896.774Mandrillus_leucophaeus
ENSAPEG00000008201lsm510093.548ENSMAMG00000012869lsm56893.548Mastacembelus_armatus
ENSAPEG00000008201lsm5100100.000ENSMZEG00005019554lsm570100.000Maylandia_zebra
ENSAPEG00000008201lsm510096.774ENSMGAG00000012117LSM56896.774Meleagris_gallopavo
ENSAPEG00000008201lsm510096.774ENSMAUG00000012222Lsm57693.333Mesocricetus_auratus
ENSAPEG00000008201lsm510096.774ENSMAUG00000008132-6896.774Mesocricetus_auratus
ENSAPEG00000008201lsm59596.610ENSMICG00000033928-7796.610Microcebus_murinus
ENSAPEG00000008201lsm510096.774ENSMICG00000005353LSM56896.774Microcebus_murinus
ENSAPEG00000008201lsm510096.774ENSMOCG00000012018Lsm57693.333Microtus_ochrogaster
ENSAPEG00000008201lsm5100100.000ENSMMOG00000004026lsm571100.000Mola_mola
ENSAPEG00000008201lsm510096.774ENSMODG00000013274-10096.774Monodelphis_domestica
ENSAPEG00000008201lsm510093.548ENSMALG00000010343lsm510093.548Monopterus_albus
ENSAPEG00000008201lsm510096.774MGP_CAROLIEiJ_G0028421Lsm57693.333Mus_caroli
ENSAPEG00000008201lsm510096.774ENSMUSG00000091625Lsm57693.333Mus_musculus
ENSAPEG00000008201lsm510096.774MGP_PahariEiJ_G0022171Lsm57693.333Mus_pahari
ENSAPEG00000008201lsm510096.774MGP_SPRETEiJ_G0029423Lsm57693.333Mus_spretus
ENSAPEG00000008201lsm510096.774ENSMLUG00000017028LSM56896.774Myotis_lucifugus
ENSAPEG00000008201lsm58789.286ENSNGAG00000017707-6489.286Nannospalax_galili
ENSAPEG00000008201lsm510096.774ENSNGAG00000024142Lsm57693.333Nannospalax_galili
ENSAPEG00000008201lsm57989.796ENSNGAG00000022569-5989.796Nannospalax_galili
ENSAPEG00000008201lsm59298.246ENSNBRG00000011386lsm57698.246Neolamprologus_brichardi
ENSAPEG00000008201lsm510096.774ENSNLEG00000015268LSM56896.774Nomascus_leucogenys
ENSAPEG00000008201lsm510096.774ENSOPRG00000002443LSM58396.774Ochotona_princeps
ENSAPEG00000008201lsm510096.774ENSODEG00000019072-6896.774Octodon_degus
ENSAPEG00000008201lsm510096.774ENSODEG00000008258-7693.333Octodon_degus
ENSAPEG00000008201lsm59456.897ENSOANG00000014540-7756.897Ornithorhynchus_anatinus
ENSAPEG00000008201lsm510096.774ENSOCUG00000029043LSM56896.774Oryctolagus_cuniculus
ENSAPEG00000008201lsm510098.387ENSORLG00020003019lsm56598.387Oryzias_latipes_hni
ENSAPEG00000008201lsm510098.387ENSORLG00015003338lsm56898.387Oryzias_latipes_hsok
ENSAPEG00000008201lsm510098.387ENSOMEG00000001078lsm56898.387Oryzias_melastigma
ENSAPEG00000008201lsm510096.774ENSOGAG00000013892LSM56896.774Otolemur_garnettii
ENSAPEG00000008201lsm510096.774ENSOARG00000006944LSM56896.774Ovis_aries
ENSAPEG00000008201lsm510096.774ENSPPAG00000003697-6896.774Pan_paniscus
ENSAPEG00000008201lsm510096.774ENSPPRG00000002550LSM56896.774Panthera_pardus
ENSAPEG00000008201lsm510096.774ENSPTIG00000015604LSM56896.774Panthera_tigris_altaica
ENSAPEG00000008201lsm510096.774ENSPTRG00000019057LSM56896.774Pan_troglodytes
ENSAPEG00000008201lsm510072.581ENSPTRG00000049488-6775.806Pan_troglodytes
ENSAPEG00000008201lsm510083.871ENSPANG00000032538-6683.871Papio_anubis
ENSAPEG00000008201lsm510095.161ENSPANG00000033477-6895.161Papio_anubis
ENSAPEG00000008201lsm510096.774ENSPANG00000032179-6896.774Papio_anubis
ENSAPEG00000008201lsm510098.387ENSPKIG00000011910lsm56898.387Paramormyrops_kingsleyae
ENSAPEG00000008201lsm59796.667ENSPSIG00000014796LSM58196.667Pelodiscus_sinensis
ENSAPEG00000008201lsm5100100.000ENSPMGG00000011699lsm5100100.000Periophthalmus_magnuspinnatus
ENSAPEG00000008201lsm510070.968ENSPEMG00000022375-6570.968Peromyscus_maniculatus_bairdii
ENSAPEG00000008201lsm5100100.000ENSPFOG00000001433lsm568100.000Poecilia_formosa
ENSAPEG00000008201lsm5100100.000ENSPLAG00000009665lsm568100.000Poecilia_latipinna
ENSAPEG00000008201lsm5100100.000ENSPMEG00000022265lsm568100.000Poecilia_mexicana
ENSAPEG00000008201lsm5100100.000ENSPREG00000022452lsm5100100.000Poecilia_reticulata
ENSAPEG00000008201lsm510091.935ENSPPYG00000017661LSM56891.935Pongo_abelii
ENSAPEG00000008201lsm58498.077ENSPCAG00000013740LSM56498.077Procavia_capensis
ENSAPEG00000008201lsm510096.774ENSPVAG00000009786LSM56896.774Pteropus_vampyrus
ENSAPEG00000008201lsm5100100.000ENSPNYG00000022236lsm570100.000Pundamilia_nyererei
ENSAPEG00000008201lsm510098.387ENSPNAG00000001887lsm56898.387Pygocentrus_nattereri
ENSAPEG00000008201lsm510096.774ENSRNOG00000042126Lsm56896.774Rattus_norvegicus
ENSAPEG00000008201lsm510095.238ENSRNOG00000027305AABR07065089.16895.238Rattus_norvegicus
ENSAPEG00000008201lsm510095.161ENSRBIG00000024431-6895.161Rhinopithecus_bieti
ENSAPEG00000008201lsm510096.774ENSRBIG00000027803-10096.774Rhinopithecus_bieti
ENSAPEG00000008201lsm510096.774ENSRBIG00000030340-6896.774Rhinopithecus_bieti
ENSAPEG00000008201lsm510096.774ENSRBIG00000030714-6896.774Rhinopithecus_bieti
ENSAPEG00000008201lsm510096.774ENSRROG00000042782-10096.774Rhinopithecus_roxellana
ENSAPEG00000008201lsm510096.774ENSRROG00000023884-6896.774Rhinopithecus_roxellana
ENSAPEG00000008201lsm510096.774ENSRROG00000004655-6896.774Rhinopithecus_roxellana
ENSAPEG00000008201lsm59449.206YER146W-6849.206Saccharomyces_cerevisiae
ENSAPEG00000008201lsm510095.161ENSSBOG00000019124-6895.161Saimiri_boliviensis_boliviensis
ENSAPEG00000008201lsm510096.774ENSSBOG00000012312LSM56896.774Saimiri_boliviensis_boliviensis
ENSAPEG00000008201lsm510085.484ENSSBOG00000034794-7785.484Saimiri_boliviensis_boliviensis
ENSAPEG00000008201lsm510098.387ENSSFOG00015010099lsm56898.387Scleropages_formosus
ENSAPEG00000008201lsm57395.556ENSSMAG00000007895lsm57695.556Scophthalmus_maximus
ENSAPEG00000008201lsm5100100.000ENSSDUG00000010762lsm5100100.000Seriola_dumerili
ENSAPEG00000008201lsm5100100.000ENSSLDG00000025242lsm57695.556Seriola_lalandi_dorsalis
ENSAPEG00000008201lsm59475.862ENSSLDG00000008014-6975.862Seriola_lalandi_dorsalis
ENSAPEG00000008201lsm510056.452ENSSARG00000003330LSM56856.452Sorex_araneus
ENSAPEG00000008201lsm510095.161ENSSPUG00000002690LSM510095.161Sphenodon_punctatus
ENSAPEG00000008201lsm57395.556ENSSPAG00000005435lsm57695.556Stegastes_partitus
ENSAPEG00000008201lsm56585.000ENSSSCG00000029661-5685.000Sus_scrofa
ENSAPEG00000008201lsm510096.774ENSSSCG00000026064-6896.774Sus_scrofa
ENSAPEG00000008201lsm510096.774ENSTGUG00000017539LSM56896.774Taeniopygia_guttata
ENSAPEG00000008201lsm510098.387ENSTNIG00000008695lsm57098.387Tetraodon_nigroviridis
ENSAPEG00000008201lsm510096.774ENSTBEG00000004876LSM56896.774Tupaia_belangeri
ENSAPEG00000008201lsm510096.774ENSTTRG00000004237LSM56896.774Tursiops_truncatus
ENSAPEG00000008201lsm510096.774ENSVPAG00000009985LSM56896.774Vicugna_pacos
ENSAPEG00000008201lsm510096.774ENSVVUG00000021311LSM56896.774Vulpes_vulpes
ENSAPEG00000008201lsm58596.226ENSXETG00000026465lsm56596.226Xenopus_tropicalis
ENSAPEG00000008201lsm5100100.000ENSXCOG00000015348lsm5100100.000Xiphophorus_couchianus
ENSAPEG00000008201lsm5100100.000ENSXMAG00000029988lsm568100.000Xiphophorus_maculatus

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