EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000008232 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 17676 bases
Position: chr7:38425427-38443102
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000011568	Fox-1_C	PF12414.8	1.2e-34	1	1
ENSAPEP00000011590	Fox-1_C	PF12414.8	1.7e-18	1	2
ENSAPEP00000011590	Fox-1_C	PF12414.8	1.7e-18	2	2
ENSAPEP00000011590	RRM_1	PF00076.22	6.8e-18	1	1
ENSAPEP00000011568	RRM_1	PF00076.22	7.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000011901	-	1095	-	ENSAPEP00000011590	364 (aa)	-	-
ENSAPET00000011878	-	1146	-	ENSAPEP00000011568	381 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000008232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000008232	rbfox1l	63	61.364	ENSAPEG00000013905	-	57	64.394
ENSAPEG00000008232	rbfox1l	97	50.418	ENSAPEG00000019081	rbfox3b	77	57.093
ENSAPEG00000008232	rbfox1l	85	50.143	ENSAPEG00000015891	-	64	62.016
ENSAPEG00000008232	rbfox1l	63	65.000	ENSAPEG00000022359	rbfox2	56	64.479
ENSAPEG00000008232	rbfox1l	65	53.036	ENSAPEG00000010636	rbfox1	89	48.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008232	rbfox1l	97	98.374	ENSAPOG00000016304	rbfox1l	98	98.374	Acanthochromis_polyacanthus
ENSAPEG00000008232	rbfox1l	100	83.424	ENSACIG00000006441	rbfox1l	100	82.609	Amphilophus_citrinellus
ENSAPEG00000008232	rbfox1l	88	99.687	ENSAOCG00000020938	rbfox1l	100	99.687	Amphiprion_ocellaris
ENSAPEG00000008232	rbfox1l	100	88.127	ENSATEG00000022649	rbfox1l	100	87.335	Anabas_testudineus
ENSAPEG00000008232	rbfox1l	65	72.727	ENSACAG00000011931	-	89	73.790	Anolis_carolinensis
ENSAPEG00000008232	rbfox1l	100	87.990	ENSACLG00000021394	rbfox1l	100	89.556	Astatotilapia_calliptera
ENSAPEG00000008232	rbfox1l	100	84.197	ENSAMXG00000010470	rbfox1l	100	84.197	Astyanax_mexicanus
ENSAPEG00000008232	rbfox1l	100	54.912	ENSCPBG00000010944	-	100	56.962	Chrysemys_picta_bellii
ENSAPEG00000008232	rbfox1l	100	88.281	ENSCSEG00000018898	rbfox1l	100	87.500	Cynoglossus_semilaevis
ENSAPEG00000008232	rbfox1l	100	90.551	ENSCVAG00000007986	rbfox1l	100	90.551	Cyprinodon_variegatus
ENSAPEG00000008232	rbfox1l	100	83.420	ENSDARG00000021184	rbfox1l	100	81.347	Danio_rerio
ENSAPEG00000008232	rbfox1l	100	80.153	ENSELUG00000015077	rbfox1l	100	82.952	Esox_lucius
ENSAPEG00000008232	rbfox1l	96	84.674	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSAPEG00000008232	rbfox1l	100	84.334	ENSGMOG00000005040	rbfox1l	100	83.551	Gadus_morhua
ENSAPEG00000008232	rbfox1l	92	89.548	ENSGAFG00000013211	rbfox1l	97	89.548	Gambusia_affinis
ENSAPEG00000008232	rbfox1l	100	89.034	ENSGACG00000010757	rbfox1l	100	89.556	Gasterosteus_aculeatus
ENSAPEG00000008232	rbfox1l	74	65.052	ENSGAGG00000012440	-	84	73.469	Gopherus_agassizii
ENSAPEG00000008232	rbfox1l	100	87.990	ENSHBUG00000013406	rbfox1l	100	89.556	Haplochromis_burtoni
ENSAPEG00000008232	rbfox1l	100	84.115	ENSHCOG00000020771	rbfox1l	100	85.156	Hippocampus_comes
ENSAPEG00000008232	rbfox1l	99	80.577	ENSIPUG00000000065	rbfox1l	99	80.952	Ictalurus_punctatus
ENSAPEG00000008232	rbfox1l	100	89.610	ENSKMAG00000005146	rbfox1l	100	89.091	Kryptolebias_marmoratus
ENSAPEG00000008232	rbfox1l	100	91.123	ENSLBEG00000017089	rbfox1l	100	91.645	Labrus_bergylta
ENSAPEG00000008232	rbfox1l	100	90.339	ENSMAMG00000019480	rbfox1l	100	90.339	Mastacembelus_armatus
ENSAPEG00000008232	rbfox1l	100	87.990	ENSMZEG00005016374	rbfox1l	100	89.556	Maylandia_zebra
ENSAPEG00000008232	rbfox1l	100	89.034	ENSMMOG00000016530	rbfox1l	100	87.990	Mola_mola
ENSAPEG00000008232	rbfox1l	100	86.423	ENSMALG00000009384	rbfox1l	100	86.684	Monopterus_albus
ENSAPEG00000008232	rbfox1l	100	89.295	ENSNBRG00000003346	rbfox1l	100	88.512	Neolamprologus_brichardi
ENSAPEG00000008232	rbfox1l	100	88.512	ENSONIG00000012754	rbfox1l	100	90.078	Oreochromis_niloticus
ENSAPEG00000008232	rbfox1l	100	89.501	ENSORLG00000011269	rbfox1l	100	89.501	Oryzias_latipes
ENSAPEG00000008232	rbfox1l	100	90.289	ENSORLG00020000162	rbfox1l	100	90.289	Oryzias_latipes_hni
ENSAPEG00000008232	rbfox1l	100	90.289	ENSORLG00015013464	rbfox1l	100	90.289	Oryzias_latipes_hsok
ENSAPEG00000008232	rbfox1l	100	91.601	ENSOMEG00000010584	rbfox1l	100	91.601	Oryzias_melastigma
ENSAPEG00000008232	rbfox1l	100	86.198	ENSPKIG00000012029	rbfox1l	100	85.417	Paramormyrops_kingsleyae
ENSAPEG00000008232	rbfox1l	100	84.031	ENSPMGG00000012082	rbfox1l	100	81.937	Periophthalmus_magnuspinnatus
ENSAPEG00000008232	rbfox1l	100	90.601	ENSPFOG00000009338	rbfox1l	100	90.339	Poecilia_formosa
ENSAPEG00000008232	rbfox1l	85	82.263	ENSPLAG00000012816	rbfox1l	99	81.957	Poecilia_latipinna
ENSAPEG00000008232	rbfox1l	100	90.437	ENSPMEG00000017597	rbfox1l	100	90.164	Poecilia_mexicana
ENSAPEG00000008232	rbfox1l	100	90.437	ENSPREG00000007940	rbfox1l	100	90.164	Poecilia_reticulata
ENSAPEG00000008232	rbfox1l	100	87.728	ENSPNYG00000002098	rbfox1l	100	89.295	Pundamilia_nyererei
ENSAPEG00000008232	rbfox1l	100	86.305	ENSPNAG00000001620	rbfox1l	100	84.238	Pygocentrus_nattereri
ENSAPEG00000008232	rbfox1l	100	81.039	ENSSFOG00015000675	rbfox1l	100	81.558	Scleropages_formosus
ENSAPEG00000008232	rbfox1l	100	89.295	ENSSMAG00000013090	rbfox1l	100	89.817	Scophthalmus_maximus
ENSAPEG00000008232	rbfox1l	100	86.632	ENSSDUG00000008705	rbfox1l	100	87.918	Seriola_dumerili
ENSAPEG00000008232	rbfox1l	100	89.433	ENSSLDG00000022256	rbfox1l	100	88.402	Seriola_lalandi_dorsalis
ENSAPEG00000008232	rbfox1l	100	96.063	ENSSPAG00000016620	rbfox1l	100	96.063	Stegastes_partitus
ENSAPEG00000008232	rbfox1l	96	85.676	ENSTRUG00000015905	rbfox1l	100	84.865	Takifugu_rubripes
ENSAPEG00000008232	rbfox1l	65	82.463	ENSTNIG00000008088	rbfox1l	97	84.733	Tetraodon_nigroviridis
ENSAPEG00000008232	rbfox1l	100	90.862	ENSXMAG00000023471	rbfox1l	100	90.601	Xiphophorus_maculatus