EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000008594 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8959 bases
Position: chr15:21204827-21213785
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012037	Nucleoplasmin	PF03066.15	6.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000012354	-	2254	-	ENSAPEP00000012037	298 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000008594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000008594	npm1a	96	44.178	ENSAPEG00000000868	npm1b	95	43.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008594	npm1a	100	90.033	ENSAPOG00000002813	npm1a	100	92.027	Acanthochromis_polyacanthus
ENSAPEG00000008594	npm1a	94	75.874	ENSACIG00000014201	npm1a	100	75.874	Amphilophus_citrinellus
ENSAPEG00000008594	npm1a	89	86.792	ENSAOCG00000004978	npm1a	100	86.792	Amphiprion_ocellaris
ENSAPEG00000008594	npm1a	100	80.323	ENSATEG00000008885	npm1a	99	80.392	Anabas_testudineus
ENSAPEG00000008594	npm1a	95	73.404	ENSACLG00000008376	npm1a	94	73.759	Astatotilapia_calliptera
ENSAPEG00000008594	npm1a	98	57.338	ENSAMXG00000010155	npm1a	99	59.727	Astyanax_mexicanus
ENSAPEG00000008594	npm1a	100	61.667	ENSCSEG00000011165	npm1a	96	85.621	Cynoglossus_semilaevis
ENSAPEG00000008594	npm1a	100	71.667	ENSCVAG00000008960	npm1a	100	72.000	Cyprinodon_variegatus
ENSAPEG00000008594	npm1a	98	63.265	ENSDARG00000014329	npm1a	96	69.427	Danio_rerio
ENSAPEG00000008594	npm1a	96	37.805	ENSEBUG00000012753	npm1a	93	35.780	Eptatretus_burgeri
ENSAPEG00000008594	npm1a	100	68.333	ENSELUG00000013705	npm1a	100	69.667	Esox_lucius
ENSAPEG00000008594	npm1a	100	75.410	ENSFHEG00000012496	npm1a	100	75.410	Fundulus_heteroclitus
ENSAPEG00000008594	npm1a	100	67.763	ENSGAFG00000013059	npm1a	100	67.434	Gambusia_affinis
ENSAPEG00000008594	npm1a	99	70.608	ENSGACG00000020319	npm1a	99	69.595	Gasterosteus_aculeatus
ENSAPEG00000008594	npm1a	99	77.532	ENSHBUG00000000776	npm1a	100	76.582	Haplochromis_burtoni
ENSAPEG00000008594	npm1a	100	55.882	ENSHCOG00000001059	npm1a	100	56.209	Hippocampus_comes
ENSAPEG00000008594	npm1a	98	62.876	ENSIPUG00000019452	npm1	99	63.880	Ictalurus_punctatus
ENSAPEG00000008594	npm1a	100	72.241	ENSKMAG00000010709	npm1a	100	72.241	Kryptolebias_marmoratus
ENSAPEG00000008594	npm1a	100	75.251	ENSLBEG00000008793	npm1a	100	75.251	Labrus_bergylta
ENSAPEG00000008594	npm1a	85	55.839	ENSLOCG00000009683	npm1a	100	55.109	Lepisosteus_oculatus
ENSAPEG00000008594	npm1a	100	77.181	ENSMAMG00000009344	npm1a	83	76.846	Mastacembelus_armatus
ENSAPEG00000008594	npm1a	99	75.873	ENSMZEG00005013717	npm1a	100	75.556	Maylandia_zebra
ENSAPEG00000008594	npm1a	95	76.408	ENSMMOG00000007980	npm1a	100	78.873	Mola_mola
ENSAPEG00000008594	npm1a	100	73.090	ENSMALG00000001146	npm1a	100	75.083	Monopterus_albus
ENSAPEG00000008594	npm1a	99	71.924	ENSNBRG00000013172	npm1a	100	72.555	Neolamprologus_brichardi
ENSAPEG00000008594	npm1a	99	75.415	ENSONIG00000001860	npm1a	98	75.920	Oreochromis_niloticus
ENSAPEG00000008594	npm1a	100	75.503	ENSORLG00000010179	npm1a	100	75.839	Oryzias_latipes
ENSAPEG00000008594	npm1a	100	73.154	ENSORLG00020020817	npm1a	100	73.490	Oryzias_latipes_hni
ENSAPEG00000008594	npm1a	100	75.168	ENSORLG00015003439	npm1a	100	75.503	Oryzias_latipes_hsok
ENSAPEG00000008594	npm1a	100	73.826	ENSOMEG00000007083	npm1a	100	73.826	Oryzias_melastigma
ENSAPEG00000008594	npm1a	100	58.361	ENSPKIG00000023943	npm1a	100	58.361	Paramormyrops_kingsleyae
ENSAPEG00000008594	npm1a	100	60.403	ENSPMGG00000011716	npm1a	100	60.403	Periophthalmus_magnuspinnatus
ENSAPEG00000008594	npm1a	100	68.421	ENSPFOG00000019173	npm1a	100	68.092	Poecilia_formosa
ENSAPEG00000008594	npm1a	100	68.106	ENSPLAG00000001093	npm1a	100	67.974	Poecilia_latipinna
ENSAPEG00000008594	npm1a	100	68.421	ENSPMEG00000012523	npm1a	100	68.092	Poecilia_mexicana
ENSAPEG00000008594	npm1a	100	68.977	ENSPREG00000001647	npm1a	100	68.647	Poecilia_reticulata
ENSAPEG00000008594	npm1a	99	77.492	ENSPNYG00000019321	npm1a	100	78.135	Pundamilia_nyererei
ENSAPEG00000008594	npm1a	98	60.000	ENSPNAG00000026891	npm1a	99	62.000	Pygocentrus_nattereri
ENSAPEG00000008594	npm1a	100	62.171	ENSSFOG00015007074	npm1a	100	63.158	Scleropages_formosus
ENSAPEG00000008594	npm1a	100	77.076	ENSSMAG00000019090	npm1a	100	76.412	Scophthalmus_maximus
ENSAPEG00000008594	npm1a	100	79.933	ENSSDUG00000015609	npm1a	100	80.602	Seriola_dumerili
ENSAPEG00000008594	npm1a	100	80.936	ENSSLDG00000017849	npm1a	100	80.936	Seriola_lalandi_dorsalis
ENSAPEG00000008594	npm1a	100	64.765	ENSSPAG00000021660	npm1a	94	65.646	Stegastes_partitus
ENSAPEG00000008594	npm1a	100	75.908	ENSTRUG00000024003	npm1a	100	76.238	Takifugu_rubripes
ENSAPEG00000008594	npm1a	100	73.913	ENSTNIG00000010773	npm1a	100	73.913	Tetraodon_nigroviridis
ENSAPEG00000008594	npm1a	99	62.290	ENSXCOG00000005958	npm1a	100	63.889	Xiphophorus_couchianus
ENSAPEG00000008594	npm1a	100	69.281	ENSXMAG00000000396	npm1a	100	68.301	Xiphophorus_maculatus