EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000008634 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Minus strand
Length
29166 bases
Position
chr9:3794269-3823434
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000012175tRNA_anti-codonPF01336.254.9e-1211
ENSAPEP00000012151tRNA_anti-codonPF01336.255.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000012479-3217-ENSAPEP00000012151600 (aa)--
ENSAPET00000012503-1686-ENSAPEP00000012175561 (aa)--
Gene Model
Click here to download ENSAPEG00000008634's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008634's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000008634rpa19370.938ENSAPEG00000019132RPA19957.360
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000008634rpa110094.333ENSAPOG00000011658rpa110094.333Acanthochromis_polyacanthus
ENSAPEG00000008634rpa19964.344ENSAPOG00000019409RPA19064.344Acanthochromis_polyacanthus
ENSAPEG00000008634rpa19962.823ENSAMEG00000007706RPA19663.406Ailuropoda_melanoleuca
ENSAPEG00000008634rpa110075.352ENSACIG00000007277rpa19978.299Amphilophus_citrinellus
ENSAPEG00000008634rpa19962.069ENSACIG00000012881RPA19962.521Amphilophus_citrinellus
ENSAPEG00000008634rpa110099.000ENSAOCG00000023376rpa110099.000Amphiprion_ocellaris
ENSAPEG00000008634rpa19958.696ENSAOCG00000009003RPA19959.317Amphiprion_ocellaris
ENSAPEG00000008634rpa110087.034ENSATEG00000022024rpa110086.316Anabas_testudineus
ENSAPEG00000008634rpa19671.719ENSATEG00000006443RPA19960.372Anabas_testudineus
ENSAPEG00000008634rpa19954.141ENSAPLG00000012442RPA19954.829Anas_platyrhynchos
ENSAPEG00000008634rpa19957.821ENSACAG00000014490RPA19858.209Anolis_carolinensis
ENSAPEG00000008634rpa19965.241ENSANAG00000023456RPA19864.418Aotus_nancymaae
ENSAPEG00000008634rpa19962.205ENSACLG00000005223RPA19962.205Astatotilapia_calliptera
ENSAPEG00000008634rpa19989.029ENSACLG00000006640rpa19989.029Astatotilapia_calliptera
ENSAPEG00000008634rpa110077.184ENSAMXG00000008418rpa19977.667Astyanax_mexicanus
ENSAPEG00000008634rpa19963.212ENSBTAG00000009711RPA19962.787Bos_taurus
ENSAPEG00000008634rpa18630.966WBGene00017546rpa-17530.966Caenorhabditis_elegans
ENSAPEG00000008634rpa19962.522ENSCJAG00000001848RPA19962.215Callithrix_jacchus
ENSAPEG00000008634rpa19963.683ENSCAFG00000019249RPA19963.993Canis_familiaris
ENSAPEG00000008634rpa19963.683ENSCAFG00020009847RPA19963.993Canis_lupus_dingo
ENSAPEG00000008634rpa19963.040ENSCHIG00000026308RPA19963.279Capra_hircus
ENSAPEG00000008634rpa19962.478ENSTSYG00000003482-9961.463Carlito_syrichta
ENSAPEG00000008634rpa19963.558ENSCPOG00000000035RPA19963.072Cavia_porcellus
ENSAPEG00000008634rpa19951.546ENSCCAG00000010981RPA19952.026Cebus_capucinus
ENSAPEG00000008634rpa19963.212ENSCLAG00000005185-9963.072Chinchilla_lanigera
ENSAPEG00000008634rpa19959.862ENSCLAG00000015045-9959.411Chinchilla_lanigera
ENSAPEG00000008634rpa19952.577ENSCSAG00000013833RPA19953.008Chlorocebus_sabaeus
ENSAPEG00000008634rpa17870.709ENSCHOG00000009454-9970.709Choloepus_hoffmanni
ENSAPEG00000008634rpa19961.724ENSCHOG00000013540-9962.181Choloepus_hoffmanni
ENSAPEG00000008634rpa19963.793ENSCPBG00000020377RPA19964.747Chrysemys_picta_bellii
ENSAPEG00000008634rpa19943.333ENSCING00000023482-9943.328Ciona_intestinalis
ENSAPEG00000008634rpa19965.775ENSCANG00000030911RPA19963.898Colobus_angolensis_palliatus
ENSAPEG00000008634rpa19964.261ENSCGRG00001008197Rpa19963.132Cricetulus_griseus_chok1gshd
ENSAPEG00000008634rpa18567.629ENSCGRG00000000582Rpa19965.613Cricetulus_griseus_crigri
ENSAPEG00000008634rpa19955.236ENSCSEG00000012726RPA19956.186Cynoglossus_semilaevis
ENSAPEG00000008634rpa110079.077ENSCSEG00000013066rpa110079.077Cynoglossus_semilaevis
ENSAPEG00000008634rpa18871.739ENSCVAG00000013446-9658.631Cyprinodon_variegatus
ENSAPEG00000008634rpa19982.616ENSCVAG00000019431rpa19982.947Cyprinodon_variegatus
ENSAPEG00000008634rpa19975.500ENSDARG00000003938rpa19975.500Danio_rerio
ENSAPEG00000008634rpa19963.511ENSDNOG00000017218RPA19962.829Dasypus_novemcinctus
ENSAPEG00000008634rpa19963.966ENSDORG00000006199Rpa19963.622Dipodomys_ordii
ENSAPEG00000008634rpa19942.079FBgn0010173RpA-709942.574Drosophila_melanogaster
ENSAPEG00000008634rpa18275.510ENSETEG00000017608RPA18275.510Echinops_telfairi
ENSAPEG00000008634rpa19964.580ENSEASG00005009372RPA19964.758Equus_asinus_asinus
ENSAPEG00000008634rpa19962.931ENSECAG00000023886RPA19962.848Equus_caballus
ENSAPEG00000008634rpa17471.122ENSEEUG00000002186-6871.292Erinaceus_europaeus
ENSAPEG00000008634rpa19981.157ENSELUG00000021071rpa19981.157Esox_lucius
ENSAPEG00000008634rpa19362.594ENSELUG00000006136RPA110062.594Esox_lucius
ENSAPEG00000008634rpa19962.418ENSFCAG00000006306RPA19962.418Felis_catus
ENSAPEG00000008634rpa19962.803ENSFALG00000006575RPA19962.684Ficedula_albicollis
ENSAPEG00000008634rpa19964.076ENSFDAG00000007720RPA19963.725Fukomys_damarensis
ENSAPEG00000008634rpa19983.250ENSFHEG00000003580rpa19983.250Fundulus_heteroclitus
ENSAPEG00000008634rpa19978.036ENSGMOG00000010382rpa19976.382Gadus_morhua
ENSAPEG00000008634rpa19961.698ENSGALG00000003072RPA19961.184Gallus_gallus
ENSAPEG00000008634rpa19982.638ENSGAFG00000012916rpa19982.638Gambusia_affinis
ENSAPEG00000008634rpa19959.237ENSGAFG00000020953RPA19959.237Gambusia_affinis
ENSAPEG00000008634rpa110083.250ENSGACG00000010856rpa110083.250Gasterosteus_aculeatus
ENSAPEG00000008634rpa19963.448ENSGAGG00000013611RPA19963.355Gopherus_agassizii
ENSAPEG00000008634rpa19965.302ENSGGOG00000014186RPA19963.394Gorilla_gorilla
ENSAPEG00000008634rpa19958.451ENSHBUG00000009348RPA19858.204Haplochromis_burtoni
ENSAPEG00000008634rpa110089.185ENSHBUG00000017773rpa19989.185Haplochromis_burtoni
ENSAPEG00000008634rpa19963.385ENSHGLG00000008846RPA19963.235Heterocephalus_glaber_female
ENSAPEG00000008634rpa19953.909ENSHGLG00100002005-9954.072Heterocephalus_glaber_male
ENSAPEG00000008634rpa19959.655ENSHGLG00100000799-9959.543Heterocephalus_glaber_male
ENSAPEG00000008634rpa19963.385ENSHGLG00100017755-9963.235Heterocephalus_glaber_male
ENSAPEG00000008634rpa19946.881ENSHCOG00000000351RPA19844.868Hippocampus_comes
ENSAPEG00000008634rpa19974.262ENSHCOG00000001401rpa19974.346Hippocampus_comes
ENSAPEG00000008634rpa19976.325ENSIPUG00000004400rpa19976.325Ictalurus_punctatus
ENSAPEG00000008634rpa19860.714ENSSTOG00000022475RPA19861.565Ictidomys_tridecemlineatus
ENSAPEG00000008634rpa19963.966ENSJJAG00000000876Rpa19864.358Jaculus_jaculus
ENSAPEG00000008634rpa19961.538ENSKMAG00000000234RPA19961.322Kryptolebias_marmoratus
ENSAPEG00000008634rpa19980.624ENSKMAG00000005605rpa19980.952Kryptolebias_marmoratus
ENSAPEG00000008634rpa19984.411ENSLBEG00000021604rpa19984.411Labrus_bergylta
ENSAPEG00000008634rpa19769.794ENSLBEG00000002281RPA18469.794Labrus_bergylta
ENSAPEG00000008634rpa18163.676ENSLACG00000007210RPA19363.203Latimeria_chalumnae
ENSAPEG00000008634rpa19972.727ENSLOCG00000006397rpa19972.893Lepisosteus_oculatus
ENSAPEG00000008634rpa19962.075ENSLAFG00000015354RPA19961.129Loxodonta_africana
ENSAPEG00000008634rpa18261.618ENSMFAG00000036138-9862.222Macaca_fascicularis
ENSAPEG00000008634rpa19963.731ENSMMUG00000011604-9963.262Macaca_mulatta
ENSAPEG00000008634rpa19959.304ENSMMUG00000002442-9958.581Macaca_mulatta
ENSAPEG00000008634rpa19963.212ENSMNEG00000031632-9863.667Macaca_nemestrina
ENSAPEG00000008634rpa18765.864ENSMNEG00000029837-9765.864Macaca_nemestrina
ENSAPEG00000008634rpa19960.137ENSMLEG00000038768-9860.606Mandrillus_leucophaeus
ENSAPEG00000008634rpa110088.333ENSMAMG00000017993rpa110088.333Mastacembelus_armatus
ENSAPEG00000008634rpa19771.163ENSMAMG00000020097RPA17970.481Mastacembelus_armatus
ENSAPEG00000008634rpa19962.205ENSMZEG00005024731RPA19962.205Maylandia_zebra
ENSAPEG00000008634rpa110089.185ENSMZEG00005007551rpa19989.185Maylandia_zebra
ENSAPEG00000008634rpa19961.698ENSMGAG00000005315RPA19861.589Meleagris_gallopavo
ENSAPEG00000008634rpa19964.298ENSMAUG00000010474Rpa19864.516Mesocricetus_auratus
ENSAPEG00000008634rpa19963.793ENSMICG00000012867RPA19963.235Microcebus_murinus
ENSAPEG00000008634rpa19963.605ENSMOCG00000013019Rpa19962.993Microtus_ochrogaster
ENSAPEG00000008634rpa19963.684ENSMMOG00000010868RPA19862.881Mola_mola
ENSAPEG00000008634rpa110083.627ENSMMOG00000014292rpa110085.690Mola_mola
ENSAPEG00000008634rpa19961.962ENSMODG00000010549RPA19961.501Monodelphis_domestica
ENSAPEG00000008634rpa19988.087ENSMALG00000011453rpa19988.087Monopterus_albus
ENSAPEG00000008634rpa19969.778ENSMALG00000001208RPA18869.778Monopterus_albus
ENSAPEG00000008634rpa19963.683MGP_CAROLIEiJ_G0016734Rpa19963.399Mus_caroli
ENSAPEG00000008634rpa19962.799ENSMUSG00000000751Rpa19962.399Mus_musculus
ENSAPEG00000008634rpa19963.636MGP_PahariEiJ_G0017871Rpa19963.192Mus_pahari
ENSAPEG00000008634rpa19962.692MGP_SPRETEiJ_G0017577Rpa19962.298Mus_spretus
ENSAPEG00000008634rpa19962.586ENSMPUG00000013119RPA19962.520Mustela_putorius_furo
ENSAPEG00000008634rpa19962.887ENSMLUG00000006113RPA19962.439Myotis_lucifugus
ENSAPEG00000008634rpa19963.167ENSNGAG00000004522Rpa19563.439Nannospalax_galili
ENSAPEG00000008634rpa19961.552ENSNBRG00000009672RPA19760.702Neolamprologus_brichardi
ENSAPEG00000008634rpa110088.770ENSNBRG00000020595rpa19988.770Neolamprologus_brichardi
ENSAPEG00000008634rpa19962.764ENSNLEG00000017149RPA19962.866Nomascus_leucogenys
ENSAPEG00000008634rpa19954.059ENSMEUG00000006714RPA19754.068Notamacropus_eugenii
ENSAPEG00000008634rpa19962.309ENSODEG00000009038RPA19663.149Octodon_degus
ENSAPEG00000008634rpa110087.765ENSONIG00000013135rpa19987.765Oreochromis_niloticus
ENSAPEG00000008634rpa19963.230ENSOANG00000010880RPA19962.914Ornithorhynchus_anatinus
ENSAPEG00000008634rpa19960.755ENSOCUG00000001504RPA19960.625Oryctolagus_cuniculus
ENSAPEG00000008634rpa19986.477ENSORLG00000004856rpa110086.477Oryzias_latipes
ENSAPEG00000008634rpa19468.610ENSORLG00000003368RPA19957.538Oryzias_latipes
ENSAPEG00000008634rpa19964.831ENSORLG00020015284RPA19764.831Oryzias_latipes_hni
ENSAPEG00000008634rpa19986.644ENSORLG00020008980rpa110086.644Oryzias_latipes_hni
ENSAPEG00000008634rpa17467.874ENSORLG00015005867-9567.874Oryzias_latipes_hsok
ENSAPEG00000008634rpa19986.644ENSORLG00015013982rpa110086.644Oryzias_latipes_hsok
ENSAPEG00000008634rpa19957.680ENSORLG00015020383RPA19957.680Oryzias_latipes_hsok
ENSAPEG00000008634rpa19959.752ENSOMEG00000011040RPA19960.140Oryzias_melastigma
ENSAPEG00000008634rpa19983.306ENSOMEG00000004704rpa110083.306Oryzias_melastigma
ENSAPEG00000008634rpa17575.410ENSOGAG00000029379-9875.410Otolemur_garnettii
ENSAPEG00000008634rpa19963.448ENSOGAG00000005581-9962.704Otolemur_garnettii
ENSAPEG00000008634rpa19963.040ENSOARG00000014479RPA19963.279Ovis_aries
ENSAPEG00000008634rpa19962.931ENSPPAG00000039680RPA19963.029Pan_paniscus
ENSAPEG00000008634rpa19962.478ENSPPRG00000011807RPA19962.255Panthera_pardus
ENSAPEG00000008634rpa19962.255ENSPTIG00000007898RPA19962.255Panthera_tigris_altaica
ENSAPEG00000008634rpa19963.276ENSPTRG00000008539RPA19963.355Pan_troglodytes
ENSAPEG00000008634rpa19963.558ENSPANG00000024592RPA19963.072Papio_anubis
ENSAPEG00000008634rpa19476.708ENSPKIG00000008053rpa19477.058Paramormyrops_kingsleyae
ENSAPEG00000008634rpa19964.483ENSPSIG00000015617RPA19864.696Pelodiscus_sinensis
ENSAPEG00000008634rpa19960.142ENSPMGG00000000543RPA19960.932Periophthalmus_magnuspinnatus
ENSAPEG00000008634rpa19984.079ENSPMGG00000011589rpa19784.079Periophthalmus_magnuspinnatus
ENSAPEG00000008634rpa19964.818ENSPEMG00000021061Rpa19964.262Peromyscus_maniculatus_bairdii
ENSAPEG00000008634rpa19962.823ENSPCIG00000019049RPA19962.153Phascolarctos_cinereus
ENSAPEG00000008634rpa19983.472ENSPFOG00000003987rpa19983.472Poecilia_formosa
ENSAPEG00000008634rpa19983.306ENSPLAG00000004984rpa19983.306Poecilia_latipinna
ENSAPEG00000008634rpa19459.481ENSPLAG00000008844-9659.481Poecilia_latipinna
ENSAPEG00000008634rpa19458.319ENSPMEG00000003627-9658.576Poecilia_mexicana
ENSAPEG00000008634rpa19983.639ENSPMEG00000020602rpa19983.639Poecilia_mexicana
ENSAPEG00000008634rpa19371.854ENSPREG00000010119RPA18472.167Poecilia_reticulata
ENSAPEG00000008634rpa19376.029ENSPREG00000010174rpa19575.893Poecilia_reticulata
ENSAPEG00000008634rpa19963.793ENSPCOG00000001799RPA19963.029Propithecus_coquereli
ENSAPEG00000008634rpa19962.759ENSPVAG00000002149RPA19962.052Pteropus_vampyrus
ENSAPEG00000008634rpa19962.047ENSPNYG00000024165RPA19962.047Pundamilia_nyererei
ENSAPEG00000008634rpa110089.517ENSPNYG00000016316rpa19989.517Pundamilia_nyererei
ENSAPEG00000008634rpa110068.375ENSPNAG00000008599rpa19967.377Pygocentrus_nattereri
ENSAPEG00000008634rpa19971.359ENSRNOG00000003123Rpa19964.474Rattus_norvegicus
ENSAPEG00000008634rpa19963.385ENSRBIG00000036587RPA19962.480Rhinopithecus_bieti
ENSAPEG00000008634rpa19958.377ENSRROG00000043278RPA19957.938Rhinopithecus_roxellana
ENSAPEG00000008634rpa19631.553YAR007CRFA19531.553Saccharomyces_cerevisiae
ENSAPEG00000008634rpa19663.685ENSSBOG00000030233RPA19764.769Saimiri_boliviensis_boliviensis
ENSAPEG00000008634rpa19962.478ENSSHAG00000007969RPA19862.295Sarcophilus_harrisii
ENSAPEG00000008634rpa19979.236ENSSFOG00015005362rpa19279.236Scleropages_formosus
ENSAPEG00000008634rpa19958.240ENSSMAG00000019746RPA19956.860Scophthalmus_maximus
ENSAPEG00000008634rpa19372.158ENSSDUG00000016358RPA19167.008Seriola_dumerili
ENSAPEG00000008634rpa110089.167ENSSDUG00000011949rpa110089.167Seriola_dumerili
ENSAPEG00000008634rpa19371.694ENSSLDG00000020784RPA19066.393Seriola_lalandi_dorsalis
ENSAPEG00000008634rpa110089.333ENSSLDG00000011806rpa110089.333Seriola_lalandi_dorsalis
ENSAPEG00000008634rpa18871.875ENSSARG00000007506RPA18971.875Sorex_araneus
ENSAPEG00000008634rpa19962.326ENSSPUG00000007223RPA19863.095Sphenodon_punctatus
ENSAPEG00000008634rpa19964.171ENSSPAG00000011165RPA19863.283Stegastes_partitus
ENSAPEG00000008634rpa110092.667ENSSPAG00000009903rpa110092.667Stegastes_partitus
ENSAPEG00000008634rpa19965.062ENSSSCG00000017822RPA19963.272Sus_scrofa
ENSAPEG00000008634rpa19962.500ENSTGUG00000005775RPA19962.397Taeniopygia_guttata
ENSAPEG00000008634rpa19369.159ENSTRUG00000000405RPA18069.037Takifugu_rubripes
ENSAPEG00000008634rpa110083.000ENSTRUG00000003616rpa110083.000Takifugu_rubripes
ENSAPEG00000008634rpa110083.333ENSTNIG00000016199rpa19983.497Tetraodon_nigroviridis
ENSAPEG00000008634rpa17871.526ENSTBEG00000002709RPA17371.526Tupaia_belangeri
ENSAPEG00000008634rpa19961.803ENSTTRG00000001169RPA19962.295Tursiops_truncatus
ENSAPEG00000008634rpa18871.154ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSAPEG00000008634rpa19965.480ENSUMAG00000009328RPA19963.072Ursus_maritimus
ENSAPEG00000008634rpa19962.003ENSVPAG00000009443RPA19960.948Vicugna_pacos
ENSAPEG00000008634rpa19963.339ENSVVUG00000021715RPA19963.502Vulpes_vulpes
ENSAPEG00000008634rpa19965.913ENSXETG00000013538rpa19966.721Xenopus_tropicalis
ENSAPEG00000008634rpa19383.154ENSXCOG00000010068rpa19483.154Xiphophorus_couchianus
ENSAPEG00000008634rpa19962.857ENSXCOG00000009899-9962.857Xiphophorus_couchianus
ENSAPEG00000008634rpa19982.638ENSXMAG00000004102rpa19983.124Xiphophorus_maculatus
ENSAPEG00000008634rpa19471.625ENSXMAG00000010333RPA18171.625Xiphophorus_maculatus

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