EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000008739 (Gene tree)
Gene ID: -
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA-binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 25933 bases
Position: chr22:24562287-24588219
Accession: ZDB-GENE-060312-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012232	RRM_1	PF00076.22	1.3e-14	1	2
ENSAPEP00000012232	RRM_1	PF00076.22	1.3e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000012560	-	2088	-	ENSAPEP00000012232	519 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000008739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008739	rnpc3	95	56.000	ENSG00000185946	RNPC3	96	57.143	Homo_sapiens
ENSAPEG00000008739	rnpc3	98	96.863	ENSAPOG00000017371	rnpc3	100	96.863	Acanthochromis_polyacanthus
ENSAPEG00000008739	rnpc3	95	55.800	ENSAMEG00000001694	RNPC3	95	56.000	Ailuropoda_melanoleuca
ENSAPEG00000008739	rnpc3	98	79.804	ENSACIG00000021043	rnpc3	99	80.000	Amphilophus_citrinellus
ENSAPEG00000008739	rnpc3	100	99.615	ENSAOCG00000014052	rnpc3	100	99.615	Amphiprion_ocellaris
ENSAPEG00000008739	rnpc3	98	82.558	ENSATEG00000021263	rnpc3	100	82.558	Anabas_testudineus
ENSAPEG00000008739	rnpc3	87	54.348	ENSAPLG00000015605	RNPC3	99	56.087	Anas_platyrhynchos
ENSAPEG00000008739	rnpc3	94	54.878	ENSACAG00000002029	RNPC3	96	53.187	Anolis_carolinensis
ENSAPEG00000008739	rnpc3	95	55.689	ENSANAG00000019950	RNPC3	95	55.689	Aotus_nancymaae
ENSAPEG00000008739	rnpc3	98	84.646	ENSACLG00000014702	rnpc3	99	84.646	Astatotilapia_calliptera
ENSAPEG00000008739	rnpc3	98	66.667	ENSAMXG00000033372	rnpc3	99	66.667	Astyanax_mexicanus
ENSAPEG00000008739	rnpc3	95	56.200	ENSBTAG00000019091	RNPC3	95	56.200	Bos_taurus
ENSAPEG00000008739	rnpc3	95	55.511	ENSCJAG00000035686	RNPC3	95	55.511	Callithrix_jacchus
ENSAPEG00000008739	rnpc3	95	55.912	ENSCAFG00000019972	RNPC3	95	56.112	Canis_familiaris
ENSAPEG00000008739	rnpc3	95	55.912	ENSCAFG00020011300	RNPC3	95	56.112	Canis_lupus_dingo
ENSAPEG00000008739	rnpc3	95	56.574	ENSCHIG00000020361	RNPC3	95	56.088	Capra_hircus
ENSAPEG00000008739	rnpc3	95	55.489	ENSTSYG00000030256	RNPC3	95	55.489	Carlito_syrichta
ENSAPEG00000008739	rnpc3	84	46.292	ENSCAPG00000013600	RNPC3	97	46.469	Cavia_aperea
ENSAPEG00000008739	rnpc3	95	54.691	ENSCPOG00000031638	RNPC3	95	54.691	Cavia_porcellus
ENSAPEG00000008739	rnpc3	95	55.489	ENSCCAG00000024301	RNPC3	95	55.489	Cebus_capucinus
ENSAPEG00000008739	rnpc3	95	56.088	ENSCATG00000002086	RNPC3	95	56.088	Cercocebus_atys
ENSAPEG00000008739	rnpc3	95	54.691	ENSCLAG00000005169	RNPC3	95	54.491	Chinchilla_lanigera
ENSAPEG00000008739	rnpc3	95	55.888	ENSCSAG00000001519	RNPC3	95	55.888	Chlorocebus_sabaeus
ENSAPEG00000008739	rnpc3	96	56.016	ENSCPBG00000028311	RNPC3	96	57.312	Chrysemys_picta_bellii
ENSAPEG00000008739	rnpc3	93	35.845	ENSCSAVG00000002800	-	84	47.305	Ciona_savignyi
ENSAPEG00000008739	rnpc3	95	55.865	ENSCANG00000031444	RNPC3	95	55.865	Colobus_angolensis_palliatus
ENSAPEG00000008739	rnpc3	95	56.048	ENSCGRG00001019276	Rnpc3	95	56.250	Cricetulus_griseus_chok1gshd
ENSAPEG00000008739	rnpc3	87	53.930	ENSCGRG00000000053	Rnpc3	99	53.930	Cricetulus_griseus_crigri
ENSAPEG00000008739	rnpc3	98	75.049	ENSCSEG00000013475	rnpc3	99	75.049	Cynoglossus_semilaevis
ENSAPEG00000008739	rnpc3	98	82.685	ENSCVAG00000002645	rnpc3	100	82.685	Cyprinodon_variegatus
ENSAPEG00000008739	rnpc3	97	67.787	ENSDARG00000011247	rnpc3	94	72.727	Danio_rerio
ENSAPEG00000008739	rnpc3	95	56.000	ENSDNOG00000047498	-	95	56.000	Dasypus_novemcinctus
ENSAPEG00000008739	rnpc3	95	55.600	ENSDNOG00000044555	-	95	55.600	Dasypus_novemcinctus
ENSAPEG00000008739	rnpc3	95	55.110	ENSDORG00000027343	Rnpc3	95	55.110	Dipodomys_ordii
ENSAPEG00000008739	rnpc3	54	40.741	FBgn0265184	CG44249	67	40.741	Drosophila_melanogaster
ENSAPEG00000008739	rnpc3	98	49.257	ENSEBUG00000002068	rnpc3	99	49.060	Eptatretus_burgeri
ENSAPEG00000008739	rnpc3	95	56.487	ENSEASG00005015957	RNPC3	95	56.487	Equus_asinus_asinus
ENSAPEG00000008739	rnpc3	95	56.687	ENSECAG00000021148	RNPC3	95	56.687	Equus_caballus
ENSAPEG00000008739	rnpc3	97	71.073	ENSELUG00000002264	rnpc3	99	69.157	Esox_lucius
ENSAPEG00000008739	rnpc3	96	55.800	ENSFCAG00000024312	RNPC3	95	55.800	Felis_catus
ENSAPEG00000008739	rnpc3	87	54.803	ENSFALG00000002580	RNPC3	99	56.744	Ficedula_albicollis
ENSAPEG00000008739	rnpc3	95	55.489	ENSFDAG00000019948	RNPC3	95	55.489	Fukomys_damarensis
ENSAPEG00000008739	rnpc3	98	74.902	ENSFHEG00000020647	rnpc3	100	74.902	Fundulus_heteroclitus
ENSAPEG00000008739	rnpc3	99	68.919	ENSGMOG00000019213	rnpc3	99	68.665	Gadus_morhua
ENSAPEG00000008739	rnpc3	95	56.048	ENSGALG00000005162	RNPC3	88	55.847	Gallus_gallus
ENSAPEG00000008739	rnpc3	98	78.627	ENSGAFG00000017236	rnpc3	100	79.452	Gambusia_affinis
ENSAPEG00000008739	rnpc3	98	80.814	ENSGACG00000002048	rnpc3	100	81.783	Gasterosteus_aculeatus
ENSAPEG00000008739	rnpc3	95	56.713	ENSGAGG00000008438	RNPC3	94	57.916	Gopherus_agassizii
ENSAPEG00000008739	rnpc3	96	48.394	ENSGGOG00000026201	-	95	48.193	Gorilla_gorilla
ENSAPEG00000008739	rnpc3	81	79.167	ENSHBUG00000015966	rnpc3	85	81.283	Haplochromis_burtoni
ENSAPEG00000008739	rnpc3	95	55.090	ENSHGLG00000001708	RNPC3	95	55.090	Heterocephalus_glaber_female
ENSAPEG00000008739	rnpc3	95	55.090	ENSHGLG00100003005	RNPC3	95	55.090	Heterocephalus_glaber_male
ENSAPEG00000008739	rnpc3	98	76.817	ENSHCOG00000017135	rnpc3	100	76.817	Hippocampus_comes
ENSAPEG00000008739	rnpc3	98	64.706	ENSIPUG00000002916	rnpc3	99	65.098	Ictalurus_punctatus
ENSAPEG00000008739	rnpc3	95	55.888	ENSSTOG00000025020	RNPC3	95	55.888	Ictidomys_tridecemlineatus
ENSAPEG00000008739	rnpc3	95	55.668	ENSJJAG00000010203	Rnpc3	96	55.422	Jaculus_jaculus
ENSAPEG00000008739	rnpc3	98	80.671	ENSKMAG00000017358	rnpc3	99	80.473	Kryptolebias_marmoratus
ENSAPEG00000008739	rnpc3	99	83.689	ENSLBEG00000024901	rnpc3	99	83.689	Labrus_bergylta
ENSAPEG00000008739	rnpc3	97	58.824	ENSLACG00000005720	RNPC3	92	56.667	Latimeria_chalumnae
ENSAPEG00000008739	rnpc3	98	64.706	ENSLOCG00000007986	rnpc3	99	61.914	Lepisosteus_oculatus
ENSAPEG00000008739	rnpc3	95	56.112	ENSLAFG00000032342	RNPC3	95	56.112	Loxodonta_africana
ENSAPEG00000008739	rnpc3	95	43.775	ENSMFAG00000002917	-	95	42.914	Macaca_fascicularis
ENSAPEG00000008739	rnpc3	95	56.088	ENSMFAG00000002004	RNPC3	95	56.088	Macaca_fascicularis
ENSAPEG00000008739	rnpc3	95	55.888	ENSMMUG00000018039	RNPC3	95	55.888	Macaca_mulatta
ENSAPEG00000008739	rnpc3	78	52.511	ENSMMUG00000002098	-	85	52.511	Macaca_mulatta
ENSAPEG00000008739	rnpc3	95	40.644	ENSMNEG00000029209	-	95	42.254	Macaca_nemestrina
ENSAPEG00000008739	rnpc3	95	52.894	ENSMNEG00000033950	RNPC3	95	52.894	Macaca_nemestrina
ENSAPEG00000008739	rnpc3	95	56.088	ENSMLEG00000033628	RNPC3	95	56.088	Mandrillus_leucophaeus
ENSAPEG00000008739	rnpc3	95	45.079	ENSMLEG00000034644	-	95	44.553	Mandrillus_leucophaeus
ENSAPEG00000008739	rnpc3	98	74.364	ENSMAMG00000007496	rnpc3	100	74.364	Mastacembelus_armatus
ENSAPEG00000008739	rnpc3	98	84.990	ENSMZEG00005020233	rnpc3	99	84.990	Maylandia_zebra
ENSAPEG00000008739	rnpc3	87	54.803	ENSMGAG00000006381	RNPC3	99	55.240	Meleagris_gallopavo
ENSAPEG00000008739	rnpc3	95	56.539	ENSMAUG00000001358	Rnpc3	95	56.539	Mesocricetus_auratus
ENSAPEG00000008739	rnpc3	95	55.289	ENSMICG00000029591	RNPC3	95	55.289	Microcebus_murinus
ENSAPEG00000008739	rnpc3	95	56.426	ENSMOCG00000013423	Rnpc3	95	56.426	Microtus_ochrogaster
ENSAPEG00000008739	rnpc3	98	75.342	ENSMMOG00000005309	rnpc3	100	76.517	Mola_mola
ENSAPEG00000008739	rnpc3	95	56.137	ENSMODG00000002946	RNPC3	95	56.137	Monodelphis_domestica
ENSAPEG00000008739	rnpc3	98	78.627	ENSMALG00000015471	rnpc3	100	78.627	Monopterus_albus
ENSAPEG00000008739	rnpc3	95	56.024	MGP_CAROLIEiJ_G0025555	Rnpc3	96	56.024	Mus_caroli
ENSAPEG00000008739	rnpc3	95	56.200	ENSMUSG00000027981	Rnpc3	99	54.661	Mus_musculus
ENSAPEG00000008739	rnpc3	96	55.378	MGP_PahariEiJ_G0027001	Rnpc3	97	55.378	Mus_pahari
ENSAPEG00000008739	rnpc3	95	56.000	MGP_SPRETEiJ_G0026505	Rnpc3	96	56.000	Mus_spretus
ENSAPEG00000008739	rnpc3	95	55.823	ENSMPUG00000007349	RNPC3	95	55.823	Mustela_putorius_furo
ENSAPEG00000008739	rnpc3	95	55.777	ENSMLUG00000028743	RNPC3	95	55.777	Myotis_lucifugus
ENSAPEG00000008739	rnpc3	95	55.711	ENSNGAG00000010939	Rnpc3	95	55.489	Nannospalax_galili
ENSAPEG00000008739	rnpc3	98	84.843	ENSNBRG00000012196	rnpc3	96	84.843	Neolamprologus_brichardi
ENSAPEG00000008739	rnpc3	95	56.000	ENSNLEG00000012013	RNPC3	95	56.000	Nomascus_leucogenys
ENSAPEG00000008739	rnpc3	95	56.287	ENSODEG00000007612	RNPC3	95	54.600	Octodon_degus
ENSAPEG00000008739	rnpc3	98	84.813	ENSONIG00000004770	rnpc3	100	84.818	Oreochromis_niloticus
ENSAPEG00000008739	rnpc3	90	58.298	ENSOANG00000008220	RNPC3	99	58.298	Ornithorhynchus_anatinus
ENSAPEG00000008739	rnpc3	95	55.777	ENSOCUG00000004016	RNPC3	95	55.489	Oryctolagus_cuniculus
ENSAPEG00000008739	rnpc3	98	76.863	ENSORLG00000005694	rnpc3	100	76.863	Oryzias_latipes
ENSAPEG00000008739	rnpc3	98	76.863	ENSORLG00020005513	rnpc3	100	76.863	Oryzias_latipes_hni
ENSAPEG00000008739	rnpc3	98	76.471	ENSORLG00015002179	rnpc3	100	76.471	Oryzias_latipes_hsok
ENSAPEG00000008739	rnpc3	98	78.235	ENSOMEG00000017737	rnpc3	100	78.235	Oryzias_melastigma
ENSAPEG00000008739	rnpc3	95	56.487	ENSOGAG00000026182	RNPC3	95	56.487	Otolemur_garnettii
ENSAPEG00000008739	rnpc3	95	56.773	ENSOARG00000018719	RNPC3	95	56.287	Ovis_aries
ENSAPEG00000008739	rnpc3	95	55.777	ENSPPAG00000037459	RNPC3	95	55.777	Pan_paniscus
ENSAPEG00000008739	rnpc3	96	49.501	ENSPPAG00000030278	-	97	49.405	Pan_paniscus
ENSAPEG00000008739	rnpc3	96	56.000	ENSPPRG00000020246	RNPC3	95	56.000	Panthera_pardus
ENSAPEG00000008739	rnpc3	96	56.000	ENSPTIG00000009887	RNPC3	97	56.000	Panthera_tigris_altaica
ENSAPEG00000008739	rnpc3	96	48.503	ENSPTRG00000044227	-	97	48.503	Pan_troglodytes
ENSAPEG00000008739	rnpc3	95	55.888	ENSPTRG00000033902	RNPC3	95	55.888	Pan_troglodytes
ENSAPEG00000008739	rnpc3	95	46.521	ENSPANG00000029957	-	96	45.328	Papio_anubis
ENSAPEG00000008739	rnpc3	95	56.200	ENSPANG00000012137	RNPC3	95	56.200	Papio_anubis
ENSAPEG00000008739	rnpc3	98	66.732	ENSPKIG00000008828	rnpc3	99	63.796	Paramormyrops_kingsleyae
ENSAPEG00000008739	rnpc3	64	54.925	ENSPSIG00000007396	RNPC3	99	55.224	Pelodiscus_sinensis
ENSAPEG00000008739	rnpc3	98	64.971	ENSPMGG00000011742	rnpc3	100	65.166	Periophthalmus_magnuspinnatus
ENSAPEG00000008739	rnpc3	88	54.466	ENSPEMG00000020112	Rnpc3	99	54.585	Peromyscus_maniculatus_bairdii
ENSAPEG00000008739	rnpc3	95	42.537	ENSPMAG00000003778	rnpc3	51	49.821	Petromyzon_marinus
ENSAPEG00000008739	rnpc3	95	56.740	ENSPCIG00000004415	-	95	56.740	Phascolarctos_cinereus
ENSAPEG00000008739	rnpc3	98	80.709	ENSPFOG00000009895	rnpc3	99	80.709	Poecilia_formosa
ENSAPEG00000008739	rnpc3	98	80.906	ENSPLAG00000012023	rnpc3	99	80.906	Poecilia_latipinna
ENSAPEG00000008739	rnpc3	100	79.655	ENSPMEG00000003663	rnpc3	99	80.906	Poecilia_mexicana
ENSAPEG00000008739	rnpc3	98	79.648	ENSPREG00000010206	rnpc3	100	79.648	Poecilia_reticulata
ENSAPEG00000008739	rnpc3	80	51.429	ENSPPYG00000001102	RNPC3	94	51.429	Pongo_abelii
ENSAPEG00000008739	rnpc3	98	84.646	ENSPNYG00000020603	rnpc3	99	84.646	Pundamilia_nyererei
ENSAPEG00000008739	rnpc3	99	57.795	ENSPNAG00000000524	rnpc3	93	57.605	Pygocentrus_nattereri
ENSAPEG00000008739	rnpc3	95	56.225	ENSRNOG00000017310	Rnpc3	95	56.426	Rattus_norvegicus
ENSAPEG00000008739	rnpc3	95	51.992	ENSRBIG00000043897	RNPC3	95	51.992	Rhinopithecus_bieti
ENSAPEG00000008739	rnpc3	95	55.888	ENSRROG00000032334	RNPC3	95	55.888	Rhinopithecus_roxellana
ENSAPEG00000008739	rnpc3	95	55.800	ENSSBOG00000024473	RNPC3	95	55.800	Saimiri_boliviensis_boliviensis
ENSAPEG00000008739	rnpc3	95	56.600	ENSSHAG00000011859	RNPC3	95	56.040	Sarcophilus_harrisii
ENSAPEG00000008739	rnpc3	97	70.138	ENSSFOG00015013055	rnpc3	99	71.026	Scleropages_formosus
ENSAPEG00000008739	rnpc3	98	82.136	ENSSMAG00000020346	rnpc3	100	82.136	Scophthalmus_maximus
ENSAPEG00000008739	rnpc3	98	86.550	ENSSDUG00000006600	rnpc3	100	86.550	Seriola_dumerili
ENSAPEG00000008739	rnpc3	98	86.550	ENSSLDG00000007979	rnpc3	100	86.550	Seriola_lalandi_dorsalis
ENSAPEG00000008739	rnpc3	95	52.727	ENSSPUG00000003872	-	92	52.525	Sphenodon_punctatus
ENSAPEG00000008739	rnpc3	98	89.020	ENSSPAG00000005633	rnpc3	100	89.020	Stegastes_partitus
ENSAPEG00000008739	rnpc3	95	56.800	ENSSSCG00000037254	RNPC3	95	56.000	Sus_scrofa
ENSAPEG00000008739	rnpc3	87	57.112	ENSTGUG00000004795	-	99	57.112	Taeniopygia_guttata
ENSAPEG00000008739	rnpc3	98	77.886	ENSTNIG00000018963	rnpc3	100	77.734	Tetraodon_nigroviridis
ENSAPEG00000008739	rnpc3	95	56.112	ENSUMAG00000007775	RNPC3	97	56.112	Ursus_maritimus
ENSAPEG00000008739	rnpc3	95	55.912	ENSVVUG00000000331	RNPC3	95	56.112	Vulpes_vulpes
ENSAPEG00000008739	rnpc3	96	45.155	ENSXETG00000025027	rnpc3	98	44.639	Xenopus_tropicalis
ENSAPEG00000008739	rnpc3	98	77.308	ENSXCOG00000005013	rnpc3	100	78.462	Xiphophorus_couchianus
ENSAPEG00000008739	rnpc3	98	79.608	ENSXMAG00000006495	rnpc3	100	80.431	Xiphophorus_maculatus