EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000008851 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 37412 bases
Position: chr6:8673680-8711091
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012606	R3H	PF01424.22	6.9e-11	1	1
ENSAPEP00000012565	R3H	PF01424.22	9.1e-11	1	1
ENSAPEP00000012529	R3H	PF01424.22	9.4e-11	1	1
ENSAPEP00000012504	R3H	PF01424.22	9.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000012944	-	2706	-	ENSAPEP00000012606	901 (aa)	-	-
ENSAPET00000012902	-	4379	-	ENSAPEP00000012565	1003 (aa)	-	-
ENSAPET00000012864	-	4815	-	ENSAPEP00000012529	1022 (aa)	-	-
ENSAPET00000012839	-	4914	-	ENSAPEP00000012504	1055 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000008851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000008851	r3hdm2	87	49.258	ENSAPEG00000016108	r3hdm1	78	61.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008851	r3hdm2	100	68.387	ENSG00000179912	R3HDM2	99	66.118	Homo_sapiens
ENSAPEG00000008851	r3hdm2	100	99.414	ENSAPOG00000020341	r3hdm2	100	99.414	Acanthochromis_polyacanthus
ENSAPEG00000008851	r3hdm2	59	37.002	ENSAPOG00000021873	-	87	36.971	Acanthochromis_polyacanthus
ENSAPEG00000008851	r3hdm2	99	66.442	ENSAMEG00000004812	R3HDM2	99	63.960	Ailuropoda_melanoleuca
ENSAPEG00000008851	r3hdm2	99	90.642	ENSACIG00000016146	r3hdm2	98	90.084	Amphilophus_citrinellus
ENSAPEG00000008851	r3hdm2	100	99.716	ENSAOCG00000023694	r3hdm2	100	99.716	Amphiprion_ocellaris
ENSAPEG00000008851	r3hdm2	58	36.170	ENSATEG00000015519	-	86	36.013	Anabas_testudineus
ENSAPEG00000008851	r3hdm2	100	96.109	ENSATEG00000025024	r3hdm2	100	96.109	Anabas_testudineus
ENSAPEG00000008851	r3hdm2	99	56.367	ENSAPLG00000004298	R3HDM2	88	74.526	Anas_platyrhynchos
ENSAPEG00000008851	r3hdm2	100	63.665	ENSACAG00000006388	R3HDM2	99	61.968	Anolis_carolinensis
ENSAPEG00000008851	r3hdm2	100	65.335	ENSANAG00000031310	-	95	65.588	Aotus_nancymaae
ENSAPEG00000008851	r3hdm2	100	67.459	ENSANAG00000025397	-	99	66.021	Aotus_nancymaae
ENSAPEG00000008851	r3hdm2	100	96.519	ENSACLG00000019106	r3hdm2	100	96.519	Astatotilapia_calliptera
ENSAPEG00000008851	r3hdm2	100	73.454	ENSAMXG00000017180	r3hdm2	99	74.394	Astyanax_mexicanus
ENSAPEG00000008851	r3hdm2	100	66.525	ENSBTAG00000018361	R3HDM2	99	65.664	Bos_taurus
ENSAPEG00000008851	r3hdm2	100	67.819	ENSCJAG00000007365	R3HDM2	99	65.830	Callithrix_jacchus
ENSAPEG00000008851	r3hdm2	100	66.667	ENSCAFG00000000215	R3HDM2	99	66.087	Canis_familiaris
ENSAPEG00000008851	r3hdm2	100	67.497	ENSCAFG00020023713	R3HDM2	99	66.311	Canis_lupus_dingo
ENSAPEG00000008851	r3hdm2	100	68.824	ENSCHIG00000014022	R3HDM2	99	66.052	Capra_hircus
ENSAPEG00000008851	r3hdm2	100	67.135	ENSTSYG00000001449	R3HDM2	99	65.507	Carlito_syrichta
ENSAPEG00000008851	r3hdm2	99	68.240	ENSCPOG00000009217	R3HDM2	99	65.540	Cavia_porcellus
ENSAPEG00000008851	r3hdm2	88	69.174	ENSCCAG00000026083	R3HDM2	99	67.742	Cebus_capucinus
ENSAPEG00000008851	r3hdm2	100	66.917	ENSCATG00000036929	R3HDM2	99	65.924	Cercocebus_atys
ENSAPEG00000008851	r3hdm2	99	68.012	ENSCLAG00000011997	R3HDM2	99	65.915	Chinchilla_lanigera
ENSAPEG00000008851	r3hdm2	99	68.271	ENSCSAG00000004911	R3HDM2	99	66.448	Chlorocebus_sabaeus
ENSAPEG00000008851	r3hdm2	71	66.889	ENSCHOG00000005636	R3HDM2	89	65.932	Choloepus_hoffmanni
ENSAPEG00000008851	r3hdm2	99	65.067	ENSCPBG00000013922	R3HDM2	99	63.143	Chrysemys_picta_bellii
ENSAPEG00000008851	r3hdm2	99	68.547	ENSCANG00000043807	R3HDM2	99	65.924	Colobus_angolensis_palliatus
ENSAPEG00000008851	r3hdm2	100	65.602	ENSCGRG00001017324	R3hdm2	99	63.118	Cricetulus_griseus_chok1gshd
ENSAPEG00000008851	r3hdm2	100	67.351	ENSCGRG00000003862	R3hdm2	99	63.041	Cricetulus_griseus_crigri
ENSAPEG00000008851	r3hdm2	100	91.940	ENSCSEG00000010925	r3hdm2	100	91.471	Cynoglossus_semilaevis
ENSAPEG00000008851	r3hdm2	100	91.071	ENSCVAG00000009058	r3hdm2	100	90.150	Cyprinodon_variegatus
ENSAPEG00000008851	r3hdm2	99	74.596	ENSDARG00000102610	r3hdm2	99	75.798	Danio_rerio
ENSAPEG00000008851	r3hdm2	99	67.319	ENSDNOG00000015033	R3HDM2	100	66.667	Dasypus_novemcinctus
ENSAPEG00000008851	r3hdm2	100	68.000	ENSDORG00000011462	R3hdm2	98	68.541	Dipodomys_ordii
ENSAPEG00000008851	r3hdm2	99	68.012	ENSEASG00005007091	R3HDM2	99	66.103	Equus_asinus_asinus
ENSAPEG00000008851	r3hdm2	99	67.815	ENSECAG00000003157	R3HDM2	99	65.915	Equus_caballus
ENSAPEG00000008851	r3hdm2	99	83.205	ENSELUG00000015969	r3hdm2	100	80.018	Esox_lucius
ENSAPEG00000008851	r3hdm2	100	67.063	ENSFCAG00000000192	R3HDM2	99	63.163	Felis_catus
ENSAPEG00000008851	r3hdm2	84	64.000	ENSFALG00000000255	R3HDM2	99	60.412	Ficedula_albicollis
ENSAPEG00000008851	r3hdm2	99	67.878	ENSFDAG00000019385	R3HDM2	99	65.291	Fukomys_damarensis
ENSAPEG00000008851	r3hdm2	100	90.883	ENSFHEG00000016484	r3hdm2	100	90.803	Fundulus_heteroclitus
ENSAPEG00000008851	r3hdm2	54	37.372	ENSFHEG00000007936	-	67	39.112	Fundulus_heteroclitus
ENSAPEG00000008851	r3hdm2	99	82.129	ENSGMOG00000007961	r3hdm2	100	82.537	Gadus_morhua
ENSAPEG00000008851	r3hdm2	99	66.378	ENSGALG00000043736	R3HDM2	99	63.828	Gallus_gallus
ENSAPEG00000008851	r3hdm2	100	92.669	ENSGAFG00000013887	r3hdm2	100	90.129	Gambusia_affinis
ENSAPEG00000008851	r3hdm2	57	36.700	ENSGAFG00000015558	-	72	38.976	Gambusia_affinis
ENSAPEG00000008851	r3hdm2	99	89.387	ENSGACG00000006442	r3hdm2	100	90.573	Gasterosteus_aculeatus
ENSAPEG00000008851	r3hdm2	100	63.028	ENSGAGG00000017797	R3HDM2	99	61.632	Gopherus_agassizii
ENSAPEG00000008851	r3hdm2	100	66.917	ENSGGOG00000015007	R3HDM2	99	65.924	Gorilla_gorilla
ENSAPEG00000008851	r3hdm2	94	61.098	ENSHGLG00000010421	-	97	59.977	Heterocephalus_glaber_female
ENSAPEG00000008851	r3hdm2	100	68.432	ENSHGLG00000010434	-	99	65.634	Heterocephalus_glaber_female
ENSAPEG00000008851	r3hdm2	99	67.913	ENSHGLG00100004183	-	99	65.540	Heterocephalus_glaber_male
ENSAPEG00000008851	r3hdm2	97	59.688	ENSHGLG00100018871	-	98	58.393	Heterocephalus_glaber_male
ENSAPEG00000008851	r3hdm2	100	90.427	ENSHCOG00000001142	r3hdm2	97	89.763	Hippocampus_comes
ENSAPEG00000008851	r3hdm2	99	79.203	ENSIPUG00000023873	r3hdm2	100	77.143	Ictalurus_punctatus
ENSAPEG00000008851	r3hdm2	100	67.316	ENSSTOG00000013424	R3HDM2	93	67.819	Ictidomys_tridecemlineatus
ENSAPEG00000008851	r3hdm2	100	67.745	ENSJJAG00000010001	R3hdm2	99	64.986	Jaculus_jaculus
ENSAPEG00000008851	r3hdm2	100	93.139	ENSKMAG00000012695	r3hdm2	97	93.045	Kryptolebias_marmoratus
ENSAPEG00000008851	r3hdm2	100	94.628	ENSLBEG00000013115	r3hdm2	96	94.628	Labrus_bergylta
ENSAPEG00000008851	r3hdm2	52	39.609	ENSLBEG00000002779	-	52	47.147	Labrus_bergylta
ENSAPEG00000008851	r3hdm2	99	65.604	ENSLACG00000019064	r3hdm2	100	64.313	Latimeria_chalumnae
ENSAPEG00000008851	r3hdm2	99	75.461	ENSLOCG00000005976	r3hdm2	99	75.752	Lepisosteus_oculatus
ENSAPEG00000008851	r3hdm2	99	66.375	ENSLAFG00000006510	R3HDM2	99	65.306	Loxodonta_africana
ENSAPEG00000008851	r3hdm2	100	68.898	ENSMFAG00000036385	R3HDM2	99	66.215	Macaca_fascicularis
ENSAPEG00000008851	r3hdm2	100	68.898	ENSMMUG00000021789	R3HDM2	99	66.215	Macaca_mulatta
ENSAPEG00000008851	r3hdm2	100	67.603	ENSMNEG00000025314	R3HDM2	99	66.215	Macaca_nemestrina
ENSAPEG00000008851	r3hdm2	100	67.025	ENSMLEG00000028915	R3HDM2	99	66.021	Mandrillus_leucophaeus
ENSAPEG00000008851	r3hdm2	100	95.955	ENSMAMG00000009793	r3hdm2	100	95.955	Mastacembelus_armatus
ENSAPEG00000008851	r3hdm2	100	97.067	ENSMZEG00005007319	r3hdm2	100	97.067	Maylandia_zebra
ENSAPEG00000008851	r3hdm2	100	68.251	ENSMICG00000012389	R3HDM2	99	65.698	Microcebus_murinus
ENSAPEG00000008851	r3hdm2	99	67.028	ENSMOCG00000014425	R3hdm2	99	63.628	Microtus_ochrogaster
ENSAPEG00000008851	r3hdm2	100	95.290	ENSMMOG00000007448	r3hdm2	99	94.633	Mola_mola
ENSAPEG00000008851	r3hdm2	91	87.979	ENSMALG00000010211	r3hdm2	98	87.755	Monopterus_albus
ENSAPEG00000008851	r3hdm2	100	67.711	MGP_CAROLIEiJ_G0015896	R3hdm2	99	65.014	Mus_caroli
ENSAPEG00000008851	r3hdm2	100	68.143	ENSMUSG00000025404	R3hdm2	99	65.201	Mus_musculus
ENSAPEG00000008851	r3hdm2	100	66.030	MGP_PahariEiJ_G0031189	R3hdm2	99	64.920	Mus_pahari
ENSAPEG00000008851	r3hdm2	100	68.035	MGP_SPRETEiJ_G0016722	R3hdm2	99	65.108	Mus_spretus
ENSAPEG00000008851	r3hdm2	98	65.909	ENSMPUG00000001818	R3HDM2	96	63.814	Mustela_putorius_furo
ENSAPEG00000008851	r3hdm2	99	65.894	ENSMLUG00000004980	R3HDM2	99	64.451	Myotis_lucifugus
ENSAPEG00000008851	r3hdm2	99	67.815	ENSNGAG00000018800	R3hdm2	99	65.822	Nannospalax_galili
ENSAPEG00000008851	r3hdm2	100	91.027	ENSNBRG00000004483	r3hdm2	100	90.674	Neolamprologus_brichardi
ENSAPEG00000008851	r3hdm2	100	67.495	ENSNLEG00000017351	R3HDM2	99	66.021	Nomascus_leucogenys
ENSAPEG00000008851	r3hdm2	100	56.566	ENSMEUG00000008588	R3HDM2	99	55.207	Notamacropus_eugenii
ENSAPEG00000008851	r3hdm2	100	64.827	ENSOPRG00000013670	R3HDM2	99	59.457	Ochotona_princeps
ENSAPEG00000008851	r3hdm2	100	94.439	ENSONIG00000005075	r3hdm2	100	94.439	Oreochromis_niloticus
ENSAPEG00000008851	r3hdm2	99	65.800	ENSOCUG00000013258	R3HDM2	99	64.733	Oryctolagus_cuniculus
ENSAPEG00000008851	r3hdm2	100	90.874	ENSORLG00000005502	r3hdm2	100	89.002	Oryzias_latipes
ENSAPEG00000008851	r3hdm2	100	90.969	ENSORLG00020017069	r3hdm2	100	90.414	Oryzias_latipes_hni
ENSAPEG00000008851	r3hdm2	100	91.063	ENSORLG00015012735	r3hdm2	100	90.508	Oryzias_latipes_hsok
ENSAPEG00000008851	r3hdm2	99	86.882	ENSOMEG00000018079	r3hdm2	99	84.082	Oryzias_melastigma
ENSAPEG00000008851	r3hdm2	100	65.596	ENSOGAG00000012055	R3HDM2	99	63.390	Otolemur_garnettii
ENSAPEG00000008851	r3hdm2	96	59.006	ENSOGAG00000027966	-	99	57.603	Otolemur_garnettii
ENSAPEG00000008851	r3hdm2	100	66.738	ENSOARG00000006929	R3HDM2	99	65.764	Ovis_aries
ENSAPEG00000008851	r3hdm2	100	67.132	ENSPPAG00000034395	R3HDM2	99	66.118	Pan_paniscus
ENSAPEG00000008851	r3hdm2	100	67.063	ENSPPRG00000009240	R3HDM2	99	64.995	Panthera_pardus
ENSAPEG00000008851	r3hdm2	100	67.063	ENSPTIG00000008752	R3HDM2	99	64.995	Panthera_tigris_altaica
ENSAPEG00000008851	r3hdm2	100	68.973	ENSPTRG00000046457	R3HDM2	99	66.312	Pan_troglodytes
ENSAPEG00000008851	r3hdm2	100	67.025	ENSPANG00000024002	R3HDM2	97	67.611	Papio_anubis
ENSAPEG00000008851	r3hdm2	99	83.449	ENSPKIG00000003171	r3hdm2	100	81.656	Paramormyrops_kingsleyae
ENSAPEG00000008851	r3hdm2	63	56.402	ENSPSIG00000006954	R3HDM2	99	54.977	Pelodiscus_sinensis
ENSAPEG00000008851	r3hdm2	99	88.009	ENSPMGG00000007061	r3hdm2	99	87.800	Periophthalmus_magnuspinnatus
ENSAPEG00000008851	r3hdm2	99	66.929	ENSPEMG00000015964	R3hdm2	99	64.507	Peromyscus_maniculatus_bairdii
ENSAPEG00000008851	r3hdm2	100	65.278	ENSPCIG00000023841	R3HDM2	99	64.313	Phascolarctos_cinereus
ENSAPEG00000008851	r3hdm2	99	86.040	ENSPFOG00000006077	r3hdm2	92	91.738	Poecilia_formosa
ENSAPEG00000008851	r3hdm2	57	36.120	ENSPLAG00000006973	-	73	38.878	Poecilia_latipinna
ENSAPEG00000008851	r3hdm2	100	92.857	ENSPLAG00000002971	r3hdm2	100	91.932	Poecilia_latipinna
ENSAPEG00000008851	r3hdm2	57	36.622	ENSPMEG00000014457	-	73	39.458	Poecilia_mexicana
ENSAPEG00000008851	r3hdm2	100	92.857	ENSPMEG00000005330	r3hdm2	100	91.932	Poecilia_mexicana
ENSAPEG00000008851	r3hdm2	100	92.293	ENSPREG00000008424	r3hdm2	100	91.370	Poecilia_reticulata
ENSAPEG00000008851	r3hdm2	97	66.445	ENSPPYG00000004685	R3HDM2	75	66.556	Pongo_abelii
ENSAPEG00000008851	r3hdm2	93	78.676	ENSPCAG00000014642	R3HDM2	87	82.558	Procavia_capensis
ENSAPEG00000008851	r3hdm2	100	67.027	ENSPCOG00000013201	R3HDM2	99	65.761	Propithecus_coquereli
ENSAPEG00000008851	r3hdm2	99	65.990	ENSPVAG00000003967	R3HDM2	99	64.543	Pteropus_vampyrus
ENSAPEG00000008851	r3hdm2	100	85.048	ENSPNYG00000013479	r3hdm2	100	87.719	Pundamilia_nyererei
ENSAPEG00000008851	r3hdm2	99	77.983	ENSPNAG00000017473	r3hdm2	100	77.921	Pygocentrus_nattereri
ENSAPEG00000008851	r3hdm2	100	65.250	ENSRNOG00000007801	R3hdm2	99	64.127	Rattus_norvegicus
ENSAPEG00000008851	r3hdm2	99	66.377	ENSRBIG00000037403	R3HDM2	99	64.085	Rhinopithecus_bieti
ENSAPEG00000008851	r3hdm2	100	67.495	ENSRROG00000022271	R3HDM2	99	66.021	Rhinopithecus_roxellana
ENSAPEG00000008851	r3hdm2	100	67.711	ENSSBOG00000023547	R3HDM2	99	66.118	Saimiri_boliviensis_boliviensis
ENSAPEG00000008851	r3hdm2	99	63.610	ENSSHAG00000003511	R3HDM2	99	66.002	Sarcophilus_harrisii
ENSAPEG00000008851	r3hdm2	100	80.886	ENSSFOG00015011219	r3hdm2	99	80.130	Scleropages_formosus
ENSAPEG00000008851	r3hdm2	100	93.779	ENSSMAG00000012073	r3hdm2	100	93.974	Scophthalmus_maximus
ENSAPEG00000008851	r3hdm2	100	97.262	ENSSDUG00000019269	r3hdm2	100	97.262	Seriola_dumerili
ENSAPEG00000008851	r3hdm2	100	97.351	ENSSLDG00000005252	r3hdm2	100	97.351	Seriola_lalandi_dorsalis
ENSAPEG00000008851	r3hdm2	94	62.909	ENSSARG00000003958	R3HDM2	89	62.545	Sorex_araneus
ENSAPEG00000008851	r3hdm2	100	61.949	ENSSPUG00000014132	R3HDM2	99	60.620	Sphenodon_punctatus
ENSAPEG00000008851	r3hdm2	100	99.149	ENSSPAG00000022594	r3hdm2	100	99.149	Stegastes_partitus
ENSAPEG00000008851	r3hdm2	100	67.603	ENSSSCG00000026498	R3HDM2	100	65.472	Sus_scrofa
ENSAPEG00000008851	r3hdm2	70	66.120	ENSTGUG00000015881	R3HDM2	99	62.051	Taeniopygia_guttata
ENSAPEG00000008851	r3hdm2	100	87.834	ENSTRUG00000015075	r3hdm2	99	87.179	Takifugu_rubripes
ENSAPEG00000008851	r3hdm2	93	90.196	ENSTNIG00000007057	r3hdm2	90	93.017	Tetraodon_nigroviridis
ENSAPEG00000008851	r3hdm2	80	68.683	ENSTBEG00000015967	R3HDM2	76	68.327	Tupaia_belangeri
ENSAPEG00000008851	r3hdm2	92	69.459	ENSTTRG00000013082	R3HDM2	87	67.457	Tursiops_truncatus
ENSAPEG00000008851	r3hdm2	100	67.058	ENSUAMG00000020913	R3HDM2	99	65.302	Ursus_americanus
ENSAPEG00000008851	r3hdm2	96	66.853	ENSUMAG00000019179	R3HDM2	96	65.393	Ursus_maritimus
ENSAPEG00000008851	r3hdm2	94	77.852	ENSVPAG00000008656	R3HDM2	82	84.942	Vicugna_pacos
ENSAPEG00000008851	r3hdm2	97	67.810	ENSVVUG00000018014	R3HDM2	95	65.455	Vulpes_vulpes
ENSAPEG00000008851	r3hdm2	100	63.152	ENSXETG00000017153	r3hdm2	99	61.181	Xenopus_tropicalis
ENSAPEG00000008851	r3hdm2	92	86.688	ENSXCOG00000013882	r3hdm2	100	88.802	Xiphophorus_couchianus
ENSAPEG00000008851	r3hdm2	100	92.575	ENSXMAG00000017978	r3hdm2	100	90.129	Xiphophorus_maculatus
ENSAPEG00000008851	r3hdm2	57	36.134	ENSXMAG00000002994	-	72	38.780	Xiphophorus_maculatus