EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000008862 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 62333 bases
Position: chr2:4016706-4079038
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012476	ResIII	PF04851.15	3.3e-07	1	1
ENSAPEP00000012445	ResIII	PF04851.15	3.6e-07	1	1
ENSAPEP00000012418	ResIII	PF04851.15	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000012811	-	6108	-	ENSAPEP00000012476	1502 (aa)	-	-
ENSAPET00000012779	-	6400	-	ENSAPEP00000012445	1561 (aa)	-	-
ENSAPET00000012752	-	6484	-	ENSAPEP00000012418	1589 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000008862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000008862	si:ch73-63e15.2	61	64.399	ENSAPEG00000006069	sbno1	68	64.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008862	si:ch73-63e15.2	76	68.664	ENSG00000064932	SBNO2	88	68.803	Homo_sapiens
ENSAPEG00000008862	si:ch73-63e15.2	100	96.373	ENSAPOG00000003185	si:ch73-63e15.2	100	96.373	Acanthochromis_polyacanthus
ENSAPEG00000008862	si:ch73-63e15.2	100	99.811	ENSAOCG00000016581	si:ch73-63e15.2	100	99.811	Amphiprion_ocellaris
ENSAPEG00000008862	si:ch73-63e15.2	100	83.855	ENSATEG00000023838	si:ch73-63e15.2	99	88.443	Anabas_testudineus
ENSAPEG00000008862	si:ch73-63e15.2	76	72.751	ENSAPLG00000007158	SBNO2	89	73.097	Anas_platyrhynchos
ENSAPEG00000008862	si:ch73-63e15.2	76	68.236	ENSANAG00000026685	SBNO2	89	68.034	Aotus_nancymaae
ENSAPEG00000008862	si:ch73-63e15.2	99	83.078	ENSACLG00000005090	si:ch73-63e15.2	100	81.954	Astatotilapia_calliptera
ENSAPEG00000008862	si:ch73-63e15.2	79	78.669	ENSAMXG00000018868	sbno2a	96	81.405	Astyanax_mexicanus
ENSAPEG00000008862	si:ch73-63e15.2	79	81.566	ENSAMXG00000015881	si:ch73-63e15.2	86	81.566	Astyanax_mexicanus
ENSAPEG00000008862	si:ch73-63e15.2	76	69.871	ENSBTAG00000020780	SBNO2	88	69.573	Bos_taurus
ENSAPEG00000008862	si:ch73-63e15.2	75	70.312	ENSCAFG00000019543	SBNO2	90	66.375	Canis_familiaris
ENSAPEG00000008862	si:ch73-63e15.2	75	70.312	ENSCAFG00020017115	SBNO2	95	66.375	Canis_lupus_dingo
ENSAPEG00000008862	si:ch73-63e15.2	75	70.252	ENSCHIG00000026127	SBNO2	90	66.428	Capra_hircus
ENSAPEG00000008862	si:ch73-63e15.2	75	67.627	ENSCAPG00000005731	SBNO2	94	67.365	Cavia_aperea
ENSAPEG00000008862	si:ch73-63e15.2	75	67.504	ENSCPOG00000007477	SBNO2	87	66.838	Cavia_porcellus
ENSAPEG00000008862	si:ch73-63e15.2	76	68.236	ENSCCAG00000037518	SBNO2	89	68.034	Cebus_capucinus
ENSAPEG00000008862	si:ch73-63e15.2	76	68.974	ENSCATG00000037046	SBNO2	88	68.974	Cercocebus_atys
ENSAPEG00000008862	si:ch73-63e15.2	77	68.814	ENSCLAG00000010178	SBNO2	99	69.264	Chinchilla_lanigera
ENSAPEG00000008862	si:ch73-63e15.2	75	69.418	ENSCSAG00000012317	SBNO2	90	65.630	Chlorocebus_sabaeus
ENSAPEG00000008862	si:ch73-63e15.2	76	70.457	ENSCPBG00000008920	SBNO2	79	83.603	Chrysemys_picta_bellii
ENSAPEG00000008862	si:ch73-63e15.2	73	68.510	ENSCANG00000036745	SBNO2	96	68.510	Colobus_angolensis_palliatus
ENSAPEG00000008862	si:ch73-63e15.2	75	67.941	ENSCGRG00001023960	Sbno2	85	67.561	Cricetulus_griseus_chok1gshd
ENSAPEG00000008862	si:ch73-63e15.2	75	69.271	ENSCGRG00000011984	Sbno2	85	68.951	Cricetulus_griseus_crigri
ENSAPEG00000008862	si:ch73-63e15.2	79	89.310	ENSCSEG00000006856	si:ch73-63e15.2	97	91.757	Cynoglossus_semilaevis
ENSAPEG00000008862	si:ch73-63e15.2	100	79.355	ENSCVAG00000005663	si:ch73-63e15.2	89	82.925	Cyprinodon_variegatus
ENSAPEG00000008862	si:ch73-63e15.2	99	68.551	ENSDARG00000016188	SBNO2	99	79.950	Danio_rerio
ENSAPEG00000008862	si:ch73-63e15.2	77	80.138	ENSDARG00000098801	sbno2a	94	76.638	Danio_rerio
ENSAPEG00000008862	si:ch73-63e15.2	75	69.652	ENSDORG00000002916	Sbno2	88	67.713	Dipodomys_ordii
ENSAPEG00000008862	si:ch73-63e15.2	76	69.237	ENSEASG00005021621	SBNO2	89	69.461	Equus_asinus_asinus
ENSAPEG00000008862	si:ch73-63e15.2	76	69.323	ENSECAG00000011827	SBNO2	89	69.547	Equus_caballus
ENSAPEG00000008862	si:ch73-63e15.2	91	87.690	ENSELUG00000020457	si:ch73-63e15.2	84	86.890	Esox_lucius
ENSAPEG00000008862	si:ch73-63e15.2	76	72.688	ENSFALG00000013988	SBNO2	92	68.634	Ficedula_albicollis
ENSAPEG00000008862	si:ch73-63e15.2	74	67.347	ENSFDAG00000015186	SBNO2	86	67.520	Fukomys_damarensis
ENSAPEG00000008862	si:ch73-63e15.2	76	88.908	ENSGMOG00000007542	si:ch73-63e15.2	96	88.908	Gadus_morhua
ENSAPEG00000008862	si:ch73-63e15.2	77	72.559	ENSGALG00000037522	SBNO2	86	72.475	Gallus_gallus
ENSAPEG00000008862	si:ch73-63e15.2	80	90.040	ENSGAFG00000004860	si:ch73-63e15.2	93	91.596	Gambusia_affinis
ENSAPEG00000008862	si:ch73-63e15.2	76	92.435	ENSGACG00000013190	si:ch73-63e15.2	95	92.435	Gasterosteus_aculeatus
ENSAPEG00000008862	si:ch73-63e15.2	89	66.447	ENSGAGG00000008348	SBNO2	90	70.769	Gopherus_agassizii
ENSAPEG00000008862	si:ch73-63e15.2	99	83.078	ENSHBUG00000010742	si:ch73-63e15.2	100	82.580	Haplochromis_burtoni
ENSAPEG00000008862	si:ch73-63e15.2	75	69.164	ENSHGLG00000008739	SBNO2	85	68.879	Heterocephalus_glaber_female
ENSAPEG00000008862	si:ch73-63e15.2	77	68.659	ENSHGLG00100005269	SBNO2	99	69.104	Heterocephalus_glaber_male
ENSAPEG00000008862	si:ch73-63e15.2	80	87.841	ENSHCOG00000000884	si:ch73-63e15.2	96	85.425	Hippocampus_comes
ENSAPEG00000008862	si:ch73-63e15.2	77	81.558	ENSIPUG00000000537	si:ch73-63e15.2	86	80.642	Ictalurus_punctatus
ENSAPEG00000008862	si:ch73-63e15.2	77	82.045	ENSIPUG00000019672	sbno2	99	77.606	Ictalurus_punctatus
ENSAPEG00000008862	si:ch73-63e15.2	75	69.913	ENSSTOG00000025832	SBNO2	90	66.346	Ictidomys_tridecemlineatus
ENSAPEG00000008862	si:ch73-63e15.2	76	65.979	ENSJJAG00000017397	Sbno2	91	62.963	Jaculus_jaculus
ENSAPEG00000008862	si:ch73-63e15.2	100	82.295	ENSKMAG00000005541	si:ch73-63e15.2	100	81.409	Kryptolebias_marmoratus
ENSAPEG00000008862	si:ch73-63e15.2	100	85.100	ENSLBEG00000025016	si:ch73-63e15.2	99	93.939	Labrus_bergylta
ENSAPEG00000008862	si:ch73-63e15.2	78	85.434	ENSLOCG00000004643	si:ch73-63e15.2	90	85.434	Lepisosteus_oculatus
ENSAPEG00000008862	si:ch73-63e15.2	74	66.222	ENSLAFG00000008824	SBNO2	89	65.817	Loxodonta_africana
ENSAPEG00000008862	si:ch73-63e15.2	76	67.378	ENSMFAG00000040030	SBNO2	90	67.378	Macaca_fascicularis
ENSAPEG00000008862	si:ch73-63e15.2	75	69.418	ENSMMUG00000010886	SBNO2	90	65.630	Macaca_mulatta
ENSAPEG00000008862	si:ch73-63e15.2	76	68.974	ENSMNEG00000039927	SBNO2	88	68.974	Macaca_nemestrina
ENSAPEG00000008862	si:ch73-63e15.2	69	69.840	ENSMLEG00000038556	SBNO2	97	65.979	Mandrillus_leucophaeus
ENSAPEG00000008862	si:ch73-63e15.2	100	85.696	ENSMAMG00000018758	si:ch73-63e15.2	100	85.890	Mastacembelus_armatus
ENSAPEG00000008862	si:ch73-63e15.2	99	83.200	ENSMZEG00005010682	si:ch73-63e15.2	100	81.943	Maylandia_zebra
ENSAPEG00000008862	si:ch73-63e15.2	76	72.681	ENSMGAG00000003801	SBNO2	90	72.596	Meleagris_gallopavo
ENSAPEG00000008862	si:ch73-63e15.2	75	69.652	ENSMAUG00000008034	Sbno2	91	66.188	Mesocricetus_auratus
ENSAPEG00000008862	si:ch73-63e15.2	76	68.552	ENSMICG00000013071	SBNO2	88	68.891	Microcebus_murinus
ENSAPEG00000008862	si:ch73-63e15.2	75	69.618	ENSMOCG00000010504	Sbno2	85	69.257	Microtus_ochrogaster
ENSAPEG00000008862	si:ch73-63e15.2	76	71.626	ENSMODG00000005382	SBNO2	89	67.750	Monodelphis_domestica
ENSAPEG00000008862	si:ch73-63e15.2	61	87.939	ENSMALG00000021831	si:ch73-63e15.2	99	86.111	Monopterus_albus
ENSAPEG00000008862	si:ch73-63e15.2	75	69.217	ENSMUSG00000035673	Sbno2	97	66.585	Mus_musculus
ENSAPEG00000008862	si:ch73-63e15.2	75	69.130	MGP_PahariEiJ_G0030976	Sbno2	88	66.475	Mus_pahari
ENSAPEG00000008862	si:ch73-63e15.2	75	69.304	MGP_SPRETEiJ_G0016381	Sbno2	94	66.667	Mus_spretus
ENSAPEG00000008862	si:ch73-63e15.2	65	71.774	ENSMPUG00000008747	SBNO2	91	71.743	Mustela_putorius_furo
ENSAPEG00000008862	si:ch73-63e15.2	75	68.983	ENSNGAG00000004308	Sbno2	86	68.983	Nannospalax_galili
ENSAPEG00000008862	si:ch73-63e15.2	81	90.437	ENSNBRG00000022968	si:ch73-63e15.2	99	91.238	Neolamprologus_brichardi
ENSAPEG00000008862	si:ch73-63e15.2	73	70.449	ENSNLEG00000001305	SBNO2	89	70.449	Nomascus_leucogenys
ENSAPEG00000008862	si:ch73-63e15.2	62	67.869	ENSMEUG00000013511	-	78	67.550	Notamacropus_eugenii
ENSAPEG00000008862	si:ch73-63e15.2	75	68.788	ENSOPRG00000017238	SBNO2	94	68.926	Ochotona_princeps
ENSAPEG00000008862	si:ch73-63e15.2	75	68.170	ENSODEG00000011822	SBNO2	86	67.756	Octodon_degus
ENSAPEG00000008862	si:ch73-63e15.2	100	83.278	ENSONIG00000002490	si:ch73-63e15.2	99	89.924	Oreochromis_niloticus
ENSAPEG00000008862	si:ch73-63e15.2	100	80.805	ENSORLG00000000913	si:ch73-63e15.2	100	80.053	Oryzias_latipes
ENSAPEG00000008862	si:ch73-63e15.2	100	80.739	ENSORLG00020010978	si:ch73-63e15.2	100	80.053	Oryzias_latipes_hni
ENSAPEG00000008862	si:ch73-63e15.2	100	80.739	ENSORLG00015000202	si:ch73-63e15.2	100	80.053	Oryzias_latipes_hsok
ENSAPEG00000008862	si:ch73-63e15.2	100	80.469	ENSOMEG00000000359	si:ch73-63e15.2	100	79.987	Oryzias_melastigma
ENSAPEG00000008862	si:ch73-63e15.2	75	67.303	ENSOARG00000011130	SBNO2	86	67.216	Ovis_aries
ENSAPEG00000008862	si:ch73-63e15.2	76	67.742	ENSPPAG00000032482	SBNO2	90	68.272	Pan_paniscus
ENSAPEG00000008862	si:ch73-63e15.2	76	68.664	ENSPTRG00000010185	SBNO2	88	69.257	Pan_troglodytes
ENSAPEG00000008862	si:ch73-63e15.2	76	65.556	ENSPANG00000009658	SBNO2	88	65.299	Papio_anubis
ENSAPEG00000008862	si:ch73-63e15.2	90	85.240	ENSPKIG00000024201	si:ch73-63e15.2	85	84.202	Paramormyrops_kingsleyae
ENSAPEG00000008862	si:ch73-63e15.2	67	80.118	ENSPKIG00000009707	-	84	80.118	Paramormyrops_kingsleyae
ENSAPEG00000008862	si:ch73-63e15.2	64	73.834	ENSPSIG00000002852	SBNO2	99	73.732	Pelodiscus_sinensis
ENSAPEG00000008862	si:ch73-63e15.2	80	86.379	ENSPMGG00000014375	si:ch73-63e15.2	96	82.271	Periophthalmus_magnuspinnatus
ENSAPEG00000008862	si:ch73-63e15.2	75	67.509	ENSPEMG00000024122	Sbno2	88	65.578	Peromyscus_maniculatus_bairdii
ENSAPEG00000008862	si:ch73-63e15.2	76	71.503	ENSPCIG00000011264	SBNO2	89	68.222	Phascolarctos_cinereus
ENSAPEG00000008862	si:ch73-63e15.2	100	79.683	ENSPFOG00000004096	si:ch73-63e15.2	100	89.042	Poecilia_formosa
ENSAPEG00000008862	si:ch73-63e15.2	100	80.065	ENSPLAG00000014653	si:ch73-63e15.2	100	79.001	Poecilia_latipinna
ENSAPEG00000008862	si:ch73-63e15.2	100	80.284	ENSPMEG00000002129	si:ch73-63e15.2	96	85.700	Poecilia_mexicana
ENSAPEG00000008862	si:ch73-63e15.2	100	79.486	ENSPREG00000006755	si:ch73-63e15.2	100	79.266	Poecilia_reticulata
ENSAPEG00000008862	si:ch73-63e15.2	70	69.152	ENSPCAG00000012256	SBNO2	79	68.686	Procavia_capensis
ENSAPEG00000008862	si:ch73-63e15.2	77	62.735	ENSPCOG00000015216	SBNO2	88	62.799	Propithecus_coquereli
ENSAPEG00000008862	si:ch73-63e15.2	100	83.278	ENSPNYG00000019926	si:ch73-63e15.2	100	82.765	Pundamilia_nyererei
ENSAPEG00000008862	si:ch73-63e15.2	77	80.664	ENSPNAG00000026609	sbno2a	99	71.373	Pygocentrus_nattereri
ENSAPEG00000008862	si:ch73-63e15.2	79	82.645	ENSPNAG00000020260	si:ch73-63e15.2	86	82.645	Pygocentrus_nattereri
ENSAPEG00000008862	si:ch73-63e15.2	75	69.686	ENSRNOG00000013987	Sbno2	89	69.592	Rattus_norvegicus
ENSAPEG00000008862	si:ch73-63e15.2	71	67.315	ENSRBIG00000009740	SBNO2	87	67.037	Rhinopithecus_bieti
ENSAPEG00000008862	si:ch73-63e15.2	67	71.002	ENSRROG00000044671	SBNO2	86	70.644	Rhinopithecus_roxellana
ENSAPEG00000008862	si:ch73-63e15.2	76	68.236	ENSSBOG00000023562	SBNO2	89	67.949	Saimiri_boliviensis_boliviensis
ENSAPEG00000008862	si:ch73-63e15.2	74	72.144	ENSSHAG00000010241	SBNO2	99	70.923	Sarcophilus_harrisii
ENSAPEG00000008862	si:ch73-63e15.2	89	81.802	ENSSFOG00015005861	si:ch73-63e15.2	98	81.802	Scleropages_formosus
ENSAPEG00000008862	si:ch73-63e15.2	100	88.332	ENSSMAG00000012489	si:ch73-63e15.2	100	88.332	Scophthalmus_maximus
ENSAPEG00000008862	si:ch73-63e15.2	100	88.469	ENSSDUG00000003527	si:ch73-63e15.2	100	88.591	Seriola_dumerili
ENSAPEG00000008862	si:ch73-63e15.2	100	88.286	ENSSLDG00000004623	si:ch73-63e15.2	100	88.408	Seriola_lalandi_dorsalis
ENSAPEG00000008862	si:ch73-63e15.2	100	93.294	ENSSPAG00000017717	si:ch73-63e15.2	100	93.355	Stegastes_partitus
ENSAPEG00000008862	si:ch73-63e15.2	76	69.376	ENSSSCG00000030042	SBNO2	90	69.204	Sus_scrofa
ENSAPEG00000008862	si:ch73-63e15.2	74	90.622	ENSTRUG00000018193	si:ch73-63e15.2	86	91.408	Takifugu_rubripes
ENSAPEG00000008862	si:ch73-63e15.2	69	70.900	ENSUAMG00000006568	SBNO2	93	71.940	Ursus_americanus
ENSAPEG00000008862	si:ch73-63e15.2	75	70.312	ENSVVUG00000022823	SBNO2	89	66.375	Vulpes_vulpes
ENSAPEG00000008862	si:ch73-63e15.2	68	75.354	ENSXETG00000021579	sbno2	91	75.556	Xenopus_tropicalis
ENSAPEG00000008862	si:ch73-63e15.2	89	87.979	ENSXCOG00000009209	si:ch73-63e15.2	94	90.508	Xiphophorus_couchianus
ENSAPEG00000008862	si:ch73-63e15.2	100	80.674	ENSXMAG00000012091	si:ch73-63e15.2	91	91.935	Xiphophorus_maculatus