EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000008868 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 12480 bases
Position: chr17:24278228-24290707
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012452	RRM_1	PF00076.22	5.9e-26	1	2
ENSAPEP00000012452	RRM_1	PF00076.22	5.9e-26	2	2
ENSAPEP00000012440	RRM_1	PF00076.22	6.6e-26	1	2
ENSAPEP00000012440	RRM_1	PF00076.22	6.6e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000012786	-	891	-	ENSAPEP00000012452	296 (aa)	-	-
ENSAPET00000012774	-	4451	-	ENSAPEP00000012440	306 (aa)	-	UPI000C314663

Gene Model

Click here to download ENSAPEG00000008868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000008868	trnau1apa	98	44.674	ENSAPEG00000008029	trnau1apb	98	43.620
ENSAPEG00000008868	trnau1apa	64	30.412	ENSAPEG00000003200	tia1l	58	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008868	trnau1apa	98	58.586	ENSG00000180098	TRNAU1AP	98	58.416	Homo_sapiens
ENSAPEG00000008868	trnau1apa	100	97.078	ENSAPOG00000007148	TRNAU1AP	100	97.078	Acanthochromis_polyacanthus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSAMEG00000011367	TRNAU1AP	98	58.416	Ailuropoda_melanoleuca
ENSAPEG00000008868	trnau1apa	100	88.925	ENSACIG00000004161	trnau1apa	100	88.925	Amphilophus_citrinellus
ENSAPEG00000008868	trnau1apa	100	100.000	ENSAOCG00000008056	trnau1apa	100	100.000	Amphiprion_ocellaris
ENSAPEG00000008868	trnau1apa	100	87.658	ENSATEG00000012140	trnau1apa	100	86.392	Anabas_testudineus
ENSAPEG00000008868	trnau1apa	92	60.490	ENSAPLG00000002606	TRNAU1AP	99	60.071	Anas_platyrhynchos
ENSAPEG00000008868	trnau1apa	74	39.912	ENSACAG00000004205	-	86	39.004	Anolis_carolinensis
ENSAPEG00000008868	trnau1apa	94	50.000	ENSACAG00000003995	-	95	50.000	Anolis_carolinensis
ENSAPEG00000008868	trnau1apa	98	58.586	ENSANAG00000018976	TRNAU1AP	98	58.416	Aotus_nancymaae
ENSAPEG00000008868	trnau1apa	100	89.902	ENSACLG00000018515	trnau1apa	100	89.902	Astatotilapia_calliptera
ENSAPEG00000008868	trnau1apa	99	54.870	ENSAMXG00000013750	trnau1apa	97	53.896	Astyanax_mexicanus
ENSAPEG00000008868	trnau1apa	92	71.591	ENSAMXG00000029240	-	95	71.591	Astyanax_mexicanus
ENSAPEG00000008868	trnau1apa	98	58.249	ENSBTAG00000010393	TRNAU1AP	98	58.086	Bos_taurus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCJAG00000009717	TRNAU1AP	98	58.416	Callithrix_jacchus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCAFG00000011735	TRNAU1AP	98	58.416	Canis_familiaris
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCAFG00020023584	TRNAU1AP	98	58.416	Canis_lupus_dingo
ENSAPEG00000008868	trnau1apa	99	58.000	ENSCHIG00000023215	TRNAU1AP	99	57.843	Capra_hircus
ENSAPEG00000008868	trnau1apa	98	60.000	ENSTSYG00000003506	TRNAU1AP	98	59.322	Carlito_syrichta
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCPOG00000001925	TRNAU1AP	98	58.416	Cavia_porcellus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCCAG00000037506	TRNAU1AP	98	58.416	Cebus_capucinus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCATG00000044617	TRNAU1AP	98	58.416	Cercocebus_atys
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCLAG00000008223	TRNAU1AP	98	58.416	Chinchilla_lanigera
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCSAG00000001014	TRNAU1AP	98	58.416	Chlorocebus_sabaeus
ENSAPEG00000008868	trnau1apa	94	58.362	ENSCPBG00000000121	TRNAU1AP	99	57.770	Chrysemys_picta_bellii
ENSAPEG00000008868	trnau1apa	55	49.080	ENSCSAVG00000011781	-	84	49.375	Ciona_savignyi
ENSAPEG00000008868	trnau1apa	98	50.505	ENSCANG00000041949	TRNAU1AP	98	52.308	Colobus_angolensis_palliatus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCGRG00001004713	Trnau1ap	98	58.416	Cricetulus_griseus_chok1gshd
ENSAPEG00000008868	trnau1apa	98	58.586	ENSCGRG00000014532	Trnau1ap	98	58.416	Cricetulus_griseus_crigri
ENSAPEG00000008868	trnau1apa	100	76.997	ENSCSEG00000006663	trnau1apa	90	89.706	Cynoglossus_semilaevis
ENSAPEG00000008868	trnau1apa	99	81.699	ENSCVAG00000018069	trnau1apa	99	83.660	Cyprinodon_variegatus
ENSAPEG00000008868	trnau1apa	99	52.508	ENSDARG00000101323	trnau1apa	95	52.349	Danio_rerio
ENSAPEG00000008868	trnau1apa	58	60.345	ENSDNOG00000047959	-	93	59.218	Dasypus_novemcinctus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSDNOG00000033009	TRNAU1AP	98	58.416	Dasypus_novemcinctus
ENSAPEG00000008868	trnau1apa	98	58.966	ENSDORG00000006349	Trnau1ap	97	61.111	Dipodomys_ordii
ENSAPEG00000008868	trnau1apa	93	36.111	FBgn0031607	CG15440	50	47.904	Drosophila_melanogaster
ENSAPEG00000008868	trnau1apa	83	57.087	ENSETEG00000012594	TRNAU1AP	98	56.299	Echinops_telfairi
ENSAPEG00000008868	trnau1apa	63	46.591	ENSEBUG00000006349	-	58	46.591	Eptatretus_burgeri
ENSAPEG00000008868	trnau1apa	98	58.586	ENSEASG00005010062	TRNAU1AP	90	68.493	Equus_asinus_asinus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSECAG00000012980	TRNAU1AP	90	68.493	Equus_caballus
ENSAPEG00000008868	trnau1apa	100	74.839	ENSELUG00000017686	trnau1apa	100	77.170	Esox_lucius
ENSAPEG00000008868	trnau1apa	93	80.682	ENSELUG00000022790	-	95	80.682	Esox_lucius
ENSAPEG00000008868	trnau1apa	98	58.586	ENSFCAG00000013401	TRNAU1AP	98	58.416	Felis_catus
ENSAPEG00000008868	trnau1apa	94	58.362	ENSFALG00000001371	TRNAU1AP	99	57.931	Ficedula_albicollis
ENSAPEG00000008868	trnau1apa	99	58.333	ENSFDAG00000018599	TRNAU1AP	99	58.170	Fukomys_damarensis
ENSAPEG00000008868	trnau1apa	79	88.525	ENSFHEG00000018232	trnau1apa	85	88.327	Fundulus_heteroclitus
ENSAPEG00000008868	trnau1apa	100	67.949	ENSGMOG00000016508	trnau1apa	99	66.346	Gadus_morhua
ENSAPEG00000008868	trnau1apa	69	43.243	ENSGALG00000012721	C2H6orf52	90	40.076	Gallus_gallus
ENSAPEG00000008868	trnau1apa	98	59.136	ENSGALG00000001310	-	98	58.140	Gallus_gallus
ENSAPEG00000008868	trnau1apa	81	86.008	ENSGAFG00000004928	trnau1apa	97	88.627	Gambusia_affinis
ENSAPEG00000008868	trnau1apa	100	90.228	ENSGACG00000001443	trnau1apa	100	90.228	Gasterosteus_aculeatus
ENSAPEG00000008868	trnau1apa	94	58.362	ENSGAGG00000004940	TRNAU1AP	99	57.770	Gopherus_agassizii
ENSAPEG00000008868	trnau1apa	98	58.586	ENSGGOG00000003511	TRNAU1AP	98	58.416	Gorilla_gorilla
ENSAPEG00000008868	trnau1apa	100	88.141	ENSHBUG00000002510	trnau1apa	100	88.141	Haplochromis_burtoni
ENSAPEG00000008868	trnau1apa	98	58.586	ENSHGLG00000010380	TRNAU1AP	98	58.416	Heterocephalus_glaber_female
ENSAPEG00000008868	trnau1apa	98	56.566	ENSHGLG00100012699	TRNAU1AP	98	56.436	Heterocephalus_glaber_male
ENSAPEG00000008868	trnau1apa	99	73.633	ENSHCOG00000014770	trnau1apa	99	71.704	Hippocampus_comes
ENSAPEG00000008868	trnau1apa	98	58.586	ENSSTOG00000000079	TRNAU1AP	98	58.416	Ictidomys_tridecemlineatus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSJJAG00000010128	Trnau1ap	98	58.086	Jaculus_jaculus
ENSAPEG00000008868	trnau1apa	100	85.714	ENSKMAG00000001230	trnau1apa	100	87.987	Kryptolebias_marmoratus
ENSAPEG00000008868	trnau1apa	100	82.019	ENSLBEG00000011683	trnau1apa	100	82.704	Labrus_bergylta
ENSAPEG00000008868	trnau1apa	99	52.288	ENSLACG00000005541	TRNAU1AP	99	51.148	Latimeria_chalumnae
ENSAPEG00000008868	trnau1apa	94	61.644	ENSLOCG00000004041	trnau1apa	97	60.616	Lepisosteus_oculatus
ENSAPEG00000008868	trnau1apa	98	58.923	ENSLAFG00000007628	TRNAU1AP	98	58.746	Loxodonta_africana
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMFAG00000043751	TRNAU1AP	98	58.416	Macaca_fascicularis
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMMUG00000006561	TRNAU1AP	98	58.416	Macaca_mulatta
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMNEG00000044201	TRNAU1AP	98	58.416	Macaca_nemestrina
ENSAPEG00000008868	trnau1apa	98	59.727	ENSMLEG00000015649	TRNAU1AP	98	59.044	Mandrillus_leucophaeus
ENSAPEG00000008868	trnau1apa	99	88.462	ENSMAMG00000001247	trnau1apa	100	88.462	Mastacembelus_armatus
ENSAPEG00000008868	trnau1apa	100	89.902	ENSMZEG00005017722	trnau1apa	100	89.902	Maylandia_zebra
ENSAPEG00000008868	trnau1apa	96	58.844	ENSMGAG00000002105	TRNAU1AP	99	58.844	Meleagris_gallopavo
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMICG00000008386	TRNAU1AP	98	58.416	Microcebus_murinus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMOCG00000011189	Trnau1ap	98	58.416	Microtus_ochrogaster
ENSAPEG00000008868	trnau1apa	100	76.667	ENSMMOG00000012107	trnau1apa	99	77.741	Mola_mola
ENSAPEG00000008868	trnau1apa	98	57.912	ENSMODG00000010927	TRNAU1AP	98	57.756	Monodelphis_domestica
ENSAPEG00000008868	trnau1apa	100	88.103	ENSMALG00000016778	trnau1apa	100	88.103	Monopterus_albus
ENSAPEG00000008868	trnau1apa	98	58.586	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	64.557	Mus_caroli
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMUSG00000028898	Trnau1ap	92	64.557	Mus_musculus
ENSAPEG00000008868	trnau1apa	98	58.586	MGP_PahariEiJ_G0028896	Trnau1ap	84	76.271	Mus_pahari
ENSAPEG00000008868	trnau1apa	98	58.586	MGP_SPRETEiJ_G0027544	Trnau1ap	92	64.557	Mus_spretus
ENSAPEG00000008868	trnau1apa	99	58.333	ENSMPUG00000015511	TRNAU1AP	99	58.170	Mustela_putorius_furo
ENSAPEG00000008868	trnau1apa	98	58.586	ENSMLUG00000012586	TRNAU1AP	98	58.416	Myotis_lucifugus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSNGAG00000015881	Trnau1ap	98	58.586	Nannospalax_galili
ENSAPEG00000008868	trnau1apa	100	76.948	ENSNBRG00000001758	trnau1apa	99	76.948	Neolamprologus_brichardi
ENSAPEG00000008868	trnau1apa	98	59.727	ENSNLEG00000009822	TRNAU1AP	98	59.044	Nomascus_leucogenys
ENSAPEG00000008868	trnau1apa	96	57.432	ENSMEUG00000006117	TRNAU1AP	99	57.432	Notamacropus_eugenii
ENSAPEG00000008868	trnau1apa	57	63.218	ENSOPRG00000007084	-	58	63.218	Ochotona_princeps
ENSAPEG00000008868	trnau1apa	98	58.586	ENSODEG00000002970	TRNAU1AP	98	58.416	Octodon_degus
ENSAPEG00000008868	trnau1apa	80	92.683	ENSONIG00000004715	trnau1apa	97	92.683	Oreochromis_niloticus
ENSAPEG00000008868	trnau1apa	93	46.897	ENSOANG00000005325	-	95	46.690	Ornithorhynchus_anatinus
ENSAPEG00000008868	trnau1apa	85	49.042	ENSOCUG00000006834	-	97	47.510	Oryctolagus_cuniculus
ENSAPEG00000008868	trnau1apa	98	57.239	ENSOCUG00000011704	-	98	57.096	Oryctolagus_cuniculus
ENSAPEG00000008868	trnau1apa	98	49.834	ENSOCUG00000002353	-	98	49.502	Oryctolagus_cuniculus
ENSAPEG00000008868	trnau1apa	100	81.759	ENSORLG00000010428	trnau1apa	100	81.759	Oryzias_latipes
ENSAPEG00000008868	trnau1apa	100	81.759	ENSORLG00020000926	trnau1ap	100	81.759	Oryzias_latipes_hni
ENSAPEG00000008868	trnau1apa	100	81.759	ENSORLG00015009858	trnau1ap	100	81.759	Oryzias_latipes_hsok
ENSAPEG00000008868	trnau1apa	100	81.433	ENSOMEG00000007873	trnau1apa	100	81.433	Oryzias_melastigma
ENSAPEG00000008868	trnau1apa	98	58.586	ENSOGAG00000002274	TRNAU1AP	98	58.416	Otolemur_garnettii
ENSAPEG00000008868	trnau1apa	99	58.000	ENSOARG00000002843	TRNAU1AP	99	57.843	Ovis_aries
ENSAPEG00000008868	trnau1apa	98	58.586	ENSPPAG00000033927	TRNAU1AP	98	58.416	Pan_paniscus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSPPRG00000004416	TRNAU1AP	98	58.416	Panthera_pardus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSPTIG00000016677	TRNAU1AP	98	58.416	Panthera_tigris_altaica
ENSAPEG00000008868	trnau1apa	88	53.846	ENSPTRG00000000434	-	93	53.558	Pan_troglodytes
ENSAPEG00000008868	trnau1apa	98	58.586	ENSPANG00000016019	TRNAU1AP	98	58.416	Papio_anubis
ENSAPEG00000008868	trnau1apa	93	61.856	ENSPKIG00000015511	trnau1apa	93	60.690	Paramormyrops_kingsleyae
ENSAPEG00000008868	trnau1apa	92	80.682	ENSPKIG00000022205	-	94	80.682	Paramormyrops_kingsleyae
ENSAPEG00000008868	trnau1apa	94	58.703	ENSPSIG00000006864	TRNAU1AP	99	58.276	Pelodiscus_sinensis
ENSAPEG00000008868	trnau1apa	99	70.903	ENSPMGG00000023893	trnau1apa	98	68.197	Periophthalmus_magnuspinnatus
ENSAPEG00000008868	trnau1apa	98	58.249	ENSPEMG00000007877	Trnau1ap	98	58.086	Peromyscus_maniculatus_bairdii
ENSAPEG00000008868	trnau1apa	58	52.841	ENSPMAG00000000592	trnau1apa	95	53.179	Petromyzon_marinus
ENSAPEG00000008868	trnau1apa	76	52.444	ENSPMAG00000005934	trnau1apa	96	50.661	Petromyzon_marinus
ENSAPEG00000008868	trnau1apa	99	82.353	ENSPFOG00000008100	trnau1apa	99	84.314	Poecilia_formosa
ENSAPEG00000008868	trnau1apa	95	81.973	ENSPLAG00000010236	trnau1apa	99	84.014	Poecilia_latipinna
ENSAPEG00000008868	trnau1apa	99	80.328	ENSPMEG00000016387	trnau1apa	97	82.295	Poecilia_mexicana
ENSAPEG00000008868	trnau1apa	89	82.105	ENSPREG00000019821	trnau1apa	95	84.444	Poecilia_reticulata
ENSAPEG00000008868	trnau1apa	86	50.746	ENSPPYG00000001639	-	98	50.746	Pongo_abelii
ENSAPEG00000008868	trnau1apa	97	48.161	ENSPCOG00000023470	-	99	48.464	Propithecus_coquereli
ENSAPEG00000008868	trnau1apa	98	58.586	ENSPCOG00000027712	-	98	58.416	Propithecus_coquereli
ENSAPEG00000008868	trnau1apa	98	58.586	ENSPVAG00000017214	TRNAU1AP	98	58.416	Pteropus_vampyrus
ENSAPEG00000008868	trnau1apa	100	88.462	ENSPNYG00000010130	trnau1apa	99	90.347	Pundamilia_nyererei
ENSAPEG00000008868	trnau1apa	99	54.849	ENSPNAG00000024905	trnau1apa	97	54.849	Pygocentrus_nattereri
ENSAPEG00000008868	trnau1apa	92	54.577	ENSRNOG00000055344	Trnau1ap	92	54.577	Rattus_norvegicus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSRBIG00000029083	TRNAU1AP	98	58.416	Rhinopithecus_bieti
ENSAPEG00000008868	trnau1apa	98	58.586	ENSRROG00000029128	TRNAU1AP	98	58.416	Rhinopithecus_roxellana
ENSAPEG00000008868	trnau1apa	98	58.586	ENSSBOG00000021299	TRNAU1AP	98	58.416	Saimiri_boliviensis_boliviensis
ENSAPEG00000008868	trnau1apa	98	57.912	ENSSHAG00000008108	TRNAU1AP	98	57.756	Sarcophilus_harrisii
ENSAPEG00000008868	trnau1apa	100	83.601	ENSSMAG00000020851	trnau1apa	100	85.852	Scophthalmus_maximus
ENSAPEG00000008868	trnau1apa	100	88.462	ENSSDUG00000011734	trnau1apa	100	88.462	Seriola_dumerili
ENSAPEG00000008868	trnau1apa	100	76.431	ENSSLDG00000012101	trnau1apa	99	76.431	Seriola_lalandi_dorsalis
ENSAPEG00000008868	trnau1apa	96	58.621	ENSSARG00000007536	TRNAU1AP	99	58.446	Sorex_araneus
ENSAPEG00000008868	trnau1apa	63	52.332	ENSSPUG00000010415	-	99	50.259	Sphenodon_punctatus
ENSAPEG00000008868	trnau1apa	98	56.478	ENSSPUG00000010400	-	99	56.146	Sphenodon_punctatus
ENSAPEG00000008868	trnau1apa	100	93.811	ENSSPAG00000005029	trnau1apa	100	93.811	Stegastes_partitus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSSSCG00000030284	TRNAU1AP	98	58.416	Sus_scrofa
ENSAPEG00000008868	trnau1apa	68	43.750	ENSTGUG00000005908	-	99	43.750	Taeniopygia_guttata
ENSAPEG00000008868	trnau1apa	96	59.259	ENSTGUG00000000735	-	99	58.844	Taeniopygia_guttata
ENSAPEG00000008868	trnau1apa	100	83.388	ENSTRUG00000003352	trnau1apa	100	82.736	Takifugu_rubripes
ENSAPEG00000008868	trnau1apa	100	77.670	ENSTNIG00000006129	trnau1apa	100	77.670	Tetraodon_nigroviridis
ENSAPEG00000008868	trnau1apa	84	51.331	ENSTBEG00000008049	-	98	52.308	Tupaia_belangeri
ENSAPEG00000008868	trnau1apa	98	58.586	ENSTTRG00000001854	TRNAU1AP	98	58.416	Tursiops_truncatus
ENSAPEG00000008868	trnau1apa	94	58.392	ENSUAMG00000008789	TRNAU1AP	99	58.219	Ursus_americanus
ENSAPEG00000008868	trnau1apa	98	58.586	ENSUMAG00000011068	TRNAU1AP	98	58.086	Ursus_maritimus
ENSAPEG00000008868	trnau1apa	98	51.133	ENSVPAG00000006778	TRNAU1AP	99	51.111	Vicugna_pacos
ENSAPEG00000008868	trnau1apa	97	57.807	ENSVVUG00000012518	TRNAU1AP	91	57.807	Vulpes_vulpes
ENSAPEG00000008868	trnau1apa	99	83.333	ENSXMAG00000017361	trnau1apa	99	85.294	Xiphophorus_maculatus