EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000008972 (Gene tree)
Gene ID: -
Gene Symbol: slbp2
Alias: zgc:158856
Full Name: stem-loop binding protein 2
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 12066 bases
Position: chr15:4457827-4469892
Accession: ZDB-GENE-070112-1722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012731	SLBP_RNA_bind	PF15247.6	4.9e-31	1	1
ENSAPEP00000012711	SLBP_RNA_bind	PF15247.6	1e-30	1	1
ENSAPEP00000012667	SLBP_RNA_bind	PF15247.6	1.5e-30	1	1
ENSAPEP00000012696	SLBP_RNA_bind	PF15247.6	1.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000013006	-	816	-	ENSAPEP00000012667	271 (aa)	-	-
ENSAPET00000013050	-	621	-	ENSAPEP00000012711	206 (aa)	-	-
ENSAPET00000013035	-	627	-	ENSAPEP00000012696	208 (aa)	-	-
ENSAPET00000013070	-	393	-	ENSAPEP00000012731	130 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000008972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000008972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000008972	slbp2	100	83.495	ENSAPOG00000004873	slbp2	86	79.464	Acanthochromis_polyacanthus
ENSAPEG00000008972	slbp2	98	73.741	ENSACIG00000007875	slbp2	83	73.741	Amphilophus_citrinellus
ENSAPEG00000008972	slbp2	98	88.679	ENSAOCG00000016241	slbp2	75	88.306	Amphiprion_ocellaris
ENSAPEG00000008972	slbp2	99	71.181	ENSATEG00000009765	slbp2	96	71.875	Anabas_testudineus
ENSAPEG00000008972	slbp2	57	70.270	ENSACAG00000007012	-	99	70.270	Anolis_carolinensis
ENSAPEG00000008972	slbp2	98	76.506	ENSACLG00000001252	slbp2	83	70.629	Astatotilapia_calliptera
ENSAPEG00000008972	slbp2	98	76.506	ENSACLG00000000965	slbp2	83	70.629	Astatotilapia_calliptera
ENSAPEG00000008972	slbp2	62	80.000	ENSAMXG00000029210	slbp2	71	55.372	Astyanax_mexicanus
ENSAPEG00000008972	slbp2	76	58.491	ENSBTAG00000048053	SLBP2	56	67.470	Bos_taurus
ENSAPEG00000008972	slbp2	69	62.637	ENSCAFG00000032438	SLBP2	86	48.175	Canis_familiaris
ENSAPEG00000008972	slbp2	58	69.333	ENSCAFG00020010381	-	67	45.752	Canis_lupus_dingo
ENSAPEG00000008972	slbp2	76	59.434	ENSCHIG00000015489	-	56	68.675	Capra_hircus
ENSAPEG00000008972	slbp2	97	64.214	ENSCSEG00000006662	slbp2	83	64.214	Cynoglossus_semilaevis
ENSAPEG00000008972	slbp2	99	64.912	ENSCVAG00000003498	slbp2	78	64.912	Cyprinodon_variegatus
ENSAPEG00000008972	slbp2	68	76.136	ENSDARG00000069428	slbp2	71	55.510	Danio_rerio
ENSAPEG00000008972	slbp2	75	59.184	ENSEASG00005020781	-	58	56.881	Equus_asinus_asinus
ENSAPEG00000008972	slbp2	75	59.184	ENSECAG00000040006	SLBP2	58	56.881	Equus_caballus
ENSAPEG00000008972	slbp2	96	51.786	ENSELUG00000021799	slbp2	81	51.786	Esox_lucius
ENSAPEG00000008972	slbp2	77	58.000	ENSFCAG00000022610	-	58	50.833	Felis_catus
ENSAPEG00000008972	slbp2	78	85.294	ENSFHEG00000016977	slbp2	62	61.905	Fundulus_heteroclitus
ENSAPEG00000008972	slbp2	66	83.721	ENSGMOG00000003044	slbp2	80	63.801	Gadus_morhua
ENSAPEG00000008972	slbp2	73	90.526	ENSGAFG00000009788	slbp2	71	78.241	Gambusia_affinis
ENSAPEG00000008972	slbp2	63	69.512	ENSGAGG00000024655	-	50	73.973	Gopherus_agassizii
ENSAPEG00000008972	slbp2	98	76.506	ENSHBUG00000019207	slbp2	83	70.979	Haplochromis_burtoni
ENSAPEG00000008972	slbp2	97	69.366	ENSHCOG00000002192	slbp2	82	69.366	Hippocampus_comes
ENSAPEG00000008972	slbp2	66	74.419	ENSIPUG00000024079	slbp2	73	54.508	Ictalurus_punctatus
ENSAPEG00000008972	slbp2	97	69.039	ENSKMAG00000005391	-	81	69.039	Kryptolebias_marmoratus
ENSAPEG00000008972	slbp2	97	71.088	ENSLBEG00000001991	slbp2	82	71.088	Labrus_bergylta
ENSAPEG00000008972	slbp2	97	70.748	ENSMAMG00000022433	slbp2	82	72.281	Mastacembelus_armatus
ENSAPEG00000008972	slbp2	98	70.979	ENSMZEG00005027825	slbp2	83	70.979	Maylandia_zebra
ENSAPEG00000008972	slbp2	70	91.209	ENSMMOG00000016838	slbp2	76	71.806	Mola_mola
ENSAPEG00000008972	slbp2	58	69.333	ENSMODG00000012173	-	97	68.421	Monodelphis_domestica
ENSAPEG00000008972	slbp2	97	68.662	ENSMALG00000009687	slbp2	79	68.662	Monopterus_albus
ENSAPEG00000008972	slbp2	99	74.272	ENSNBRG00000017849	slbp2	78	74.272	Neolamprologus_brichardi
ENSAPEG00000008972	slbp2	82	88.462	ENSONIG00000017877	slbp2	75	71.004	Oreochromis_niloticus
ENSAPEG00000008972	slbp2	98	67.730	ENSORLG00000025890	slbp2	82	67.730	Oryzias_latipes
ENSAPEG00000008972	slbp2	98	67.376	ENSORLG00020003230	slbp2	82	67.376	Oryzias_latipes_hni
ENSAPEG00000008972	slbp2	98	67.730	ENSORLG00015007694	slbp2	82	67.730	Oryzias_latipes_hsok
ENSAPEG00000008972	slbp2	98	68.440	ENSOMEG00000017456	slbp2	82	68.440	Oryzias_melastigma
ENSAPEG00000008972	slbp2	62	67.500	ENSPPRG00000024354	-	56	56.881	Panthera_pardus
ENSAPEG00000008972	slbp2	62	67.500	ENSPTIG00000005802	-	56	56.881	Panthera_tigris_altaica
ENSAPEG00000008972	slbp2	62	77.500	ENSPKIG00000008757	slbp2	77	51.653	Paramormyrops_kingsleyae
ENSAPEG00000008972	slbp2	57	74.324	ENSPSIG00000009564	-	100	74.324	Pelodiscus_sinensis
ENSAPEG00000008972	slbp2	84	78.182	ENSPMGG00000008118	slbp2	89	69.231	Periophthalmus_magnuspinnatus
ENSAPEG00000008972	slbp2	57	67.568	ENSPCIG00000015949	-	69	46.715	Phascolarctos_cinereus
ENSAPEG00000008972	slbp2	98	67.010	ENSPFOG00000021993	slbp2	80	69.141	Poecilia_formosa
ENSAPEG00000008972	slbp2	98	67.010	ENSPLAG00000019220	slbp2	82	67.010	Poecilia_latipinna
ENSAPEG00000008972	slbp2	98	67.944	ENSPLAG00000006548	-	81	67.944	Poecilia_latipinna
ENSAPEG00000008972	slbp2	98	67.354	ENSPMEG00000024341	slbp2	82	67.354	Poecilia_mexicana
ENSAPEG00000008972	slbp2	79	43.293	ENSPREG00000001384	-	60	44.737	Poecilia_reticulata
ENSAPEG00000008972	slbp2	100	75.362	ENSPNYG00000022514	slbp2	84	75.362	Pundamilia_nyererei
ENSAPEG00000008972	slbp2	98	50.174	ENSPNAG00000013685	slbp2	83	50.174	Pygocentrus_nattereri
ENSAPEG00000008972	slbp2	75	56.122	ENSRNOG00000052628	LOC100363294	56	56.122	Rattus_norvegicus
ENSAPEG00000008972	slbp2	66	75.581	ENSSFOG00015022968	-	69	68.317	Scleropages_formosus
ENSAPEG00000008972	slbp2	62	81.250	ENSSFOG00015015666	-	52	65.766	Scleropages_formosus
ENSAPEG00000008972	slbp2	100	68.571	ENSSMAG00000011121	slbp2	86	68.929	Scophthalmus_maximus
ENSAPEG00000008972	slbp2	97	72.954	ENSSDUG00000023370	slbp2	80	72.954	Seriola_dumerili
ENSAPEG00000008972	slbp2	100	75.000	ENSSLDG00000008723	slbp2	65	75.000	Seriola_lalandi_dorsalis
ENSAPEG00000008972	slbp2	62	70.000	ENSSPUG00000003262	-	65	62.366	Sphenodon_punctatus
ENSAPEG00000008972	slbp2	100	82.979	ENSSPAG00000011574	slbp2	100	82.979	Stegastes_partitus
ENSAPEG00000008972	slbp2	56	67.123	ENSSSCG00000023691	-	86	40.212	Sus_scrofa
ENSAPEG00000008972	slbp2	97	67.698	ENSTRUG00000021937	slbp2	81	67.698	Takifugu_rubripes
ENSAPEG00000008972	slbp2	62	92.500	ENSTNIG00000007598	-	99	92.500	Tetraodon_nigroviridis
ENSAPEG00000008972	slbp2	81	55.238	ENSUAMG00000000146	-	66	52.542	Ursus_americanus
ENSAPEG00000008972	slbp2	81	55.238	ENSUMAG00000016224	-	66	52.542	Ursus_maritimus
ENSAPEG00000008972	slbp2	72	60.215	ENSVVUG00000018009	-	69	47.445	Vulpes_vulpes
ENSAPEG00000008972	slbp2	97	69.310	ENSXMAG00000007005	slbp2	81	69.310	Xiphophorus_maculatus