EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000009020 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat containing 6C1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 18268 bases
Position: chr14:2580360-2598627
Accession: ZDB-GENE-030131-7440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000012782	Ago_hook	PF10427.9	1.1e-09	1	1
ENSAPEP00000012782	RRM_1	PF00076.22	0.0002	1	1
ENSAPEP00000012753	RRM_1	PF00076.22	0.0002	1	1
ENSAPEP00000012734	RRM_1	PF00076.22	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000013122	-	5037	-	ENSAPEP00000012782	1678 (aa)	-	-
ENSAPET00000013092	-	5583	-	ENSAPEP00000012753	1700 (aa)	-	-
ENSAPET00000013073	-	5694	-	ENSAPEP00000012734	1737 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000009020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000009020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000009020	tnrc6c1	99	49.003	ENSG00000078687	TNRC6C	100	56.897	Homo_sapiens
ENSAPEG00000009020	tnrc6c1	100	98.412	ENSAPOG00000019749	tnrc6c1	100	98.412	Acanthochromis_polyacanthus
ENSAPEG00000009020	tnrc6c1	99	48.453	ENSAMEG00000013756	TNRC6C	77	52.108	Ailuropoda_melanoleuca
ENSAPEG00000009020	tnrc6c1	100	79.263	ENSACIG00000008075	tnrc6c1	99	78.867	Amphilophus_citrinellus
ENSAPEG00000009020	tnrc6c1	100	99.770	ENSAOCG00000023968	tnrc6c1	100	99.770	Amphiprion_ocellaris
ENSAPEG00000009020	tnrc6c1	95	66.020	ENSAPLG00000005456	TNRC6C	73	53.727	Anas_platyrhynchos
ENSAPEG00000009020	tnrc6c1	99	50.775	ENSACAG00000016198	TNRC6C	71	54.953	Anolis_carolinensis
ENSAPEG00000009020	tnrc6c1	99	48.952	ENSANAG00000021554	TNRC6C	80	54.354	Aotus_nancymaae
ENSAPEG00000009020	tnrc6c1	99	79.708	ENSACLG00000000424	tnrc6c1	99	79.169	Astatotilapia_calliptera
ENSAPEG00000009020	tnrc6c1	99	47.495	ENSBTAG00000018658	TNRC6C	89	54.082	Bos_taurus
ENSAPEG00000009020	tnrc6c1	99	48.799	ENSCJAG00000019431	TNRC6C	80	54.354	Callithrix_jacchus
ENSAPEG00000009020	tnrc6c1	95	58.787	ENSCAFG00000005224	TNRC6C	78	50.207	Canis_familiaris
ENSAPEG00000009020	tnrc6c1	99	49.419	ENSCAFG00020006661	TNRC6C	80	53.950	Canis_lupus_dingo
ENSAPEG00000009020	tnrc6c1	99	49.069	ENSCHIG00000026004	TNRC6C	88	55.641	Capra_hircus
ENSAPEG00000009020	tnrc6c1	92	51.228	ENSTSYG00000005403	TNRC6C	80	54.050	Carlito_syrichta
ENSAPEG00000009020	tnrc6c1	99	46.313	ENSCAPG00000007307	TNRC6C	88	50.602	Cavia_aperea
ENSAPEG00000009020	tnrc6c1	99	49.333	ENSCPOG00000000467	TNRC6C	94	54.662	Cavia_porcellus
ENSAPEG00000009020	tnrc6c1	99	49.948	ENSCCAG00000030524	TNRC6C	80	54.354	Cebus_capucinus
ENSAPEG00000009020	tnrc6c1	99	49.002	ENSCATG00000033135	TNRC6C	80	54.334	Cercocebus_atys
ENSAPEG00000009020	tnrc6c1	99	50.400	ENSCLAG00000011139	TNRC6C	71	55.374	Chinchilla_lanigera
ENSAPEG00000009020	tnrc6c1	99	49.177	ENSCSAG00000005167	TNRC6C	72	53.961	Chlorocebus_sabaeus
ENSAPEG00000009020	tnrc6c1	61	63.636	ENSCHOG00000000088	TNRC6C	51	63.636	Choloepus_hoffmanni
ENSAPEG00000009020	tnrc6c1	100	50.313	ENSCPBG00000027960	TNRC6C	80	57.043	Chrysemys_picta_bellii
ENSAPEG00000009020	tnrc6c1	99	49.053	ENSCANG00000041771	TNRC6C	80	54.405	Colobus_angolensis_palliatus
ENSAPEG00000009020	tnrc6c1	99	49.076	ENSCGRG00001022686	Tnrc6c	80	53.315	Cricetulus_griseus_chok1gshd
ENSAPEG00000009020	tnrc6c1	99	49.256	ENSCGRG00000018041	Tnrc6c	80	53.315	Cricetulus_griseus_crigri
ENSAPEG00000009020	tnrc6c1	99	82.647	ENSCSEG00000012744	tnrc6c1	95	82.529	Cynoglossus_semilaevis
ENSAPEG00000009020	tnrc6c1	93	75.709	ENSDARG00000076847	tnrc6c1	99	61.665	Danio_rerio
ENSAPEG00000009020	tnrc6c1	99	49.557	ENSDNOG00000003247	TNRC6C	72	55.252	Dasypus_novemcinctus
ENSAPEG00000009020	tnrc6c1	99	46.561	ENSDORG00000004558	Tnrc6c	80	51.588	Dipodomys_ordii
ENSAPEG00000009020	tnrc6c1	88	55.929	ENSETEG00000005527	TNRC6C	82	54.890	Echinops_telfairi
ENSAPEG00000009020	tnrc6c1	92	50.915	ENSEASG00005004799	TNRC6C	80	54.713	Equus_asinus_asinus
ENSAPEG00000009020	tnrc6c1	99	49.441	ENSECAG00000012486	TNRC6C	72	54.348	Equus_caballus
ENSAPEG00000009020	tnrc6c1	93	56.640	ENSEEUG00000010008	TNRC6C	76	56.810	Erinaceus_europaeus
ENSAPEG00000009020	tnrc6c1	99	48.017	ENSFCAG00000028358	TNRC6C	80	53.456	Felis_catus
ENSAPEG00000009020	tnrc6c1	92	50.846	ENSFALG00000000848	TNRC6C	81	53.417	Ficedula_albicollis
ENSAPEG00000009020	tnrc6c1	97	50.272	ENSFDAG00000010368	TNRC6C	78	54.597	Fukomys_damarensis
ENSAPEG00000009020	tnrc6c1	100	85.796	ENSFHEG00000002936	tnrc6c1	100	85.279	Fundulus_heteroclitus
ENSAPEG00000009020	tnrc6c1	100	50.411	ENSGALG00000001725	TNRC6C	80	56.912	Gallus_gallus
ENSAPEG00000009020	tnrc6c1	100	85.630	ENSGAFG00000019019	tnrc6c1	100	84.922	Gambusia_affinis
ENSAPEG00000009020	tnrc6c1	99	78.449	ENSGACG00000012320	tnrc6c1	92	76.424	Gasterosteus_aculeatus
ENSAPEG00000009020	tnrc6c1	100	51.768	ENSGAGG00000022043	TNRC6C	77	55.165	Gopherus_agassizii
ENSAPEG00000009020	tnrc6c1	99	48.974	ENSGGOG00000011304	TNRC6C	80	54.584	Gorilla_gorilla
ENSAPEG00000009020	tnrc6c1	100	87.163	ENSHBUG00000010846	tnrc6c1	100	86.745	Haplochromis_burtoni
ENSAPEG00000009020	tnrc6c1	99	49.787	ENSHGLG00000004809	TNRC6C	71	54.694	Heterocephalus_glaber_female
ENSAPEG00000009020	tnrc6c1	99	49.601	ENSHGLG00100012597	TNRC6C	71	54.397	Heterocephalus_glaber_male
ENSAPEG00000009020	tnrc6c1	99	63.441	ENSIPUG00000000818	tnrc6c1	94	61.556	Ictalurus_punctatus
ENSAPEG00000009020	tnrc6c1	99	49.840	ENSSTOG00000009101	TNRC6C	77	54.733	Ictidomys_tridecemlineatus
ENSAPEG00000009020	tnrc6c1	99	49.073	ENSJJAG00000017055	Tnrc6c	71	54.437	Jaculus_jaculus
ENSAPEG00000009020	tnrc6c1	98	81.808	ENSKMAG00000021023	tnrc6c1	100	79.146	Kryptolebias_marmoratus
ENSAPEG00000009020	tnrc6c1	90	62.827	ENSLACG00000015283	TNRC6C	73	63.212	Latimeria_chalumnae
ENSAPEG00000009020	tnrc6c1	99	80.640	ENSLOCG00000013377	tnrc6c1	89	80.640	Lepisosteus_oculatus
ENSAPEG00000009020	tnrc6c1	99	49.629	ENSLAFG00000011122	TNRC6C	76	53.531	Loxodonta_africana
ENSAPEG00000009020	tnrc6c1	99	49.002	ENSMFAG00000043943	TNRC6C	80	54.334	Macaca_fascicularis
ENSAPEG00000009020	tnrc6c1	99	49.280	ENSMMUG00000011924	TNRC6C	80	54.334	Macaca_mulatta
ENSAPEG00000009020	tnrc6c1	99	48.950	ENSMNEG00000030405	TNRC6C	80	54.264	Macaca_nemestrina
ENSAPEG00000009020	tnrc6c1	99	49.002	ENSMLEG00000033436	TNRC6C	80	54.334	Mandrillus_leucophaeus
ENSAPEG00000009020	tnrc6c1	100	89.248	ENSMAMG00000023613	tnrc6c1	100	88.367	Mastacembelus_armatus
ENSAPEG00000009020	tnrc6c1	100	87.256	ENSMZEG00005010920	tnrc6c1	100	86.682	Maylandia_zebra
ENSAPEG00000009020	tnrc6c1	93	67.925	ENSMGAG00000003906	TNRC6C	64	64.885	Meleagris_gallopavo
ENSAPEG00000009020	tnrc6c1	92	50.395	ENSMAUG00000021618	Tnrc6c	80	53.760	Mesocricetus_auratus
ENSAPEG00000009020	tnrc6c1	99	48.998	ENSMICG00000003952	TNRC6C	80	54.558	Microcebus_murinus
ENSAPEG00000009020	tnrc6c1	99	48.732	ENSMOCG00000015879	Tnrc6c	77	54.526	Microtus_ochrogaster
ENSAPEG00000009020	tnrc6c1	94	85.767	ENSMMOG00000005203	tnrc6c1	100	84.839	Mola_mola
ENSAPEG00000009020	tnrc6c1	99	50.292	ENSMODG00000001785	TNRC6C	71	55.187	Monodelphis_domestica
ENSAPEG00000009020	tnrc6c1	99	48.836	MGP_CAROLIEiJ_G0017465	Tnrc6c	77	54.282	Mus_caroli
ENSAPEG00000009020	tnrc6c1	99	48.786	ENSMUSG00000025571	Tnrc6c	77	54.352	Mus_musculus
ENSAPEG00000009020	tnrc6c1	99	48.889	MGP_PahariEiJ_G0018593	Tnrc6c	77	54.494	Mus_pahari
ENSAPEG00000009020	tnrc6c1	99	48.627	MGP_SPRETEiJ_G0018309	Tnrc6c	77	54.140	Mus_spretus
ENSAPEG00000009020	tnrc6c1	99	48.812	ENSMPUG00000013348	TNRC6C	71	53.642	Mustela_putorius_furo
ENSAPEG00000009020	tnrc6c1	99	48.367	ENSMLUG00000014431	TNRC6C	71	51.981	Myotis_lucifugus
ENSAPEG00000009020	tnrc6c1	99	49.208	ENSNGAG00000012203	Tnrc6c	71	53.797	Nannospalax_galili
ENSAPEG00000009020	tnrc6c1	100	86.862	ENSNBRG00000005344	tnrc6c1	100	86.979	Neolamprologus_brichardi
ENSAPEG00000009020	tnrc6c1	99	47.560	ENSNLEG00000000047	TNRC6C	71	51.286	Nomascus_leucogenys
ENSAPEG00000009020	tnrc6c1	94	55.250	ENSMEUG00000005104	TNRC6C	71	67.532	Notamacropus_eugenii
ENSAPEG00000009020	tnrc6c1	94	50.954	ENSODEG00000012499	TNRC6C	88	55.248	Octodon_degus
ENSAPEG00000009020	tnrc6c1	94	87.594	ENSONIG00000002210	tnrc6c1	100	87.282	Oreochromis_niloticus
ENSAPEG00000009020	tnrc6c1	72	54.740	ENSOANG00000009758	-	67	51.273	Ornithorhynchus_anatinus
ENSAPEG00000009020	tnrc6c1	100	80.234	ENSORLG00000009837	tnrc6c1	100	85.818	Oryzias_latipes
ENSAPEG00000009020	tnrc6c1	100	80.137	ENSORLG00020016510	tnrc6c1	100	80.938	Oryzias_latipes_hni
ENSAPEG00000009020	tnrc6c1	80	77.933	ENSORLG00015000171	tnrc6c1	99	78.146	Oryzias_latipes_hsok
ENSAPEG00000009020	tnrc6c1	100	82.885	ENSOMEG00000000357	tnrc6c1	100	81.530	Oryzias_melastigma
ENSAPEG00000009020	tnrc6c1	94	48.885	ENSOGAG00000007197	TNRC6C	80	51.814	Otolemur_garnettii
ENSAPEG00000009020	tnrc6c1	96	46.932	ENSOARG00000006041	TNRC6C	87	53.250	Ovis_aries
ENSAPEG00000009020	tnrc6c1	99	48.924	ENSPPAG00000027160	TNRC6C	80	54.354	Pan_paniscus
ENSAPEG00000009020	tnrc6c1	99	48.017	ENSPPRG00000018881	TNRC6C	80	53.526	Panthera_pardus
ENSAPEG00000009020	tnrc6c1	85	56.639	ENSPTIG00000008791	TNRC6C	68	52.589	Panthera_tigris_altaica
ENSAPEG00000009020	tnrc6c1	99	48.975	ENSPTRG00000009699	TNRC6C	80	54.424	Pan_troglodytes
ENSAPEG00000009020	tnrc6c1	99	49.002	ENSPANG00000019994	TNRC6C	80	54.791	Papio_anubis
ENSAPEG00000009020	tnrc6c1	94	57.925	ENSPKIG00000005428	tnrc6c1	100	58.226	Paramormyrops_kingsleyae
ENSAPEG00000009020	tnrc6c1	97	51.083	ENSPSIG00000018069	TNRC6C	77	54.710	Pelodiscus_sinensis
ENSAPEG00000009020	tnrc6c1	93	74.775	ENSPMGG00000022911	tnrc6c1	98	79.757	Periophthalmus_magnuspinnatus
ENSAPEG00000009020	tnrc6c1	99	49.551	ENSPEMG00000009785	Tnrc6c	80	50.985	Peromyscus_maniculatus_bairdii
ENSAPEG00000009020	tnrc6c1	51	39.960	ENSPCIG00000017421	-	65	42.753	Phascolarctos_cinereus
ENSAPEG00000009020	tnrc6c1	99	86.141	ENSPFOG00000012560	tnrc6c1	99	80.352	Poecilia_formosa
ENSAPEG00000009020	tnrc6c1	94	86.185	ENSPLAG00000021055	tnrc6c1	100	86.123	Poecilia_latipinna
ENSAPEG00000009020	tnrc6c1	99	49.202	ENSPPYG00000008679	TNRC6C	71	53.930	Pongo_abelii
ENSAPEG00000009020	tnrc6c1	68	67.489	ENSPCAG00000012510	TNRC6C	84	66.590	Procavia_capensis
ENSAPEG00000009020	tnrc6c1	94	50.755	ENSPCOG00000021451	TNRC6C	80	54.449	Propithecus_coquereli
ENSAPEG00000009020	tnrc6c1	69	63.333	ENSPVAG00000002008	TNRC6C	73	63.333	Pteropus_vampyrus
ENSAPEG00000009020	tnrc6c1	100	87.313	ENSPNYG00000014477	tnrc6c1	100	86.739	Pundamilia_nyererei
ENSAPEG00000009020	tnrc6c1	92	50.142	ENSRNOG00000022395	Tnrc6c	80	54.211	Rattus_norvegicus
ENSAPEG00000009020	tnrc6c1	99	49.053	ENSRBIG00000027777	TNRC6C	80	54.405	Rhinopithecus_bieti
ENSAPEG00000009020	tnrc6c1	99	49.053	ENSRROG00000042912	TNRC6C	80	54.526	Rhinopithecus_roxellana
ENSAPEG00000009020	tnrc6c1	99	48.935	ENSSBOG00000023981	TNRC6C	80	53.893	Saimiri_boliviensis_boliviensis
ENSAPEG00000009020	tnrc6c1	51	64.921	ENSSHAG00000018330	-	100	64.076	Sarcophilus_harrisii
ENSAPEG00000009020	tnrc6c1	84	64.534	ENSSFOG00015004735	-	99	70.027	Scleropages_formosus
ENSAPEG00000009020	tnrc6c1	99	61.830	ENSSFOG00015006475	tnrc6c1	96	60.704	Scleropages_formosus
ENSAPEG00000009020	tnrc6c1	100	87.625	ENSSMAG00000012761	tnrc6c1	100	87.032	Scophthalmus_maximus
ENSAPEG00000009020	tnrc6c1	99	91.263	ENSSDUG00000002366	tnrc6c1	98	90.378	Seriola_dumerili
ENSAPEG00000009020	tnrc6c1	94	91.323	ENSSLDG00000025613	tnrc6c1	100	90.574	Seriola_lalandi_dorsalis
ENSAPEG00000009020	tnrc6c1	65	63.636	ENSSARG00000006816	TNRC6C	85	63.793	Sorex_araneus
ENSAPEG00000009020	tnrc6c1	87	48.197	ENSSPUG00000007341	TNRC6C	88	54.386	Sphenodon_punctatus
ENSAPEG00000009020	tnrc6c1	98	94.289	ENSSPAG00000014977	tnrc6c1	98	93.772	Stegastes_partitus
ENSAPEG00000009020	tnrc6c1	91	50.800	ENSSSCG00000034373	TNRC6C	80	53.862	Sus_scrofa
ENSAPEG00000009020	tnrc6c1	97	51.135	ENSTGUG00000007733	TNRC6C	78	54.654	Taeniopygia_guttata
ENSAPEG00000009020	tnrc6c1	99	81.375	ENSTRUG00000011685	tnrc6c1	99	79.730	Takifugu_rubripes
ENSAPEG00000009020	tnrc6c1	99	76.261	ENSTNIG00000005273	tnrc6c1	100	79.324	Tetraodon_nigroviridis
ENSAPEG00000009020	tnrc6c1	65	51.952	ENSTBEG00000005046	TNRC6C	100	50.166	Tupaia_belangeri
ENSAPEG00000009020	tnrc6c1	97	50.458	ENSTTRG00000010828	TNRC6C	77	54.545	Tursiops_truncatus
ENSAPEG00000009020	tnrc6c1	99	48.263	ENSUMAG00000013614	TNRC6C	72	52.765	Ursus_maritimus
ENSAPEG00000009020	tnrc6c1	51	52.484	ENSVPAG00000006765	-	80	64.109	Vicugna_pacos
ENSAPEG00000009020	tnrc6c1	92	52.408	ENSVVUG00000015268	TNRC6C	80	56.110	Vulpes_vulpes
ENSAPEG00000009020	tnrc6c1	92	50.257	ENSXETG00000019470	tnrc6c	89	53.173	Xenopus_tropicalis
ENSAPEG00000009020	tnrc6c1	100	85.455	ENSXMAG00000025971	tnrc6c1	100	85.171	Xiphophorus_maculatus