EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000009489 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 8529 bases
Position: chr13:1194178-1202706
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000013333	RNA_pol_L_2	PF13656.6	3.5e-29	1	1
ENSAPEP00000013340	RNA_pol_L_2	PF13656.6	3.6e-29	1	1
ENSAPEP00000013333	RNA_pol_L	PF01193.24	4.7e-11	1	1
ENSAPEP00000013340	RNA_pol_L	PF01193.24	5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000013689	-	1138	-	ENSAPEP00000013333	114 (aa)	-	-
ENSAPET00000013696	-	1789	-	ENSAPEP00000013340	115 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000009489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000009489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000009489	polr1d	96	33.636	ENSAPEG00000021761	polr2j	91	33.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000009489	polr1d	98	66.071	ENSG00000186184	POLR1D	97	66.071	Homo_sapiens
ENSAPEG00000009489	polr1d	98	89.286	ENSAPOG00000021882	polr1d	97	97.087	Acanthochromis_polyacanthus
ENSAPEG00000009489	polr1d	98	66.071	ENSAMEG00000019095	POLR1D	90	66.071	Ailuropoda_melanoleuca
ENSAPEG00000009489	polr1d	100	85.217	ENSACIG00000013328	polr1d	100	85.217	Amphilophus_citrinellus
ENSAPEG00000009489	polr1d	100	98.246	ENSAOCG00000018500	polr1d	100	98.246	Amphiprion_ocellaris
ENSAPEG00000009489	polr1d	100	85.965	ENSATEG00000019322	polr1d	100	85.965	Anabas_testudineus
ENSAPEG00000009489	polr1d	97	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSAPEG00000009489	polr1d	98	66.071	ENSANAG00000024486	POLR1D	84	66.071	Aotus_nancymaae
ENSAPEG00000009489	polr1d	100	87.719	ENSACLG00000023805	polr1d	100	87.719	Astatotilapia_calliptera
ENSAPEG00000009489	polr1d	99	76.991	ENSAMXG00000036118	polr1d	98	76.991	Astyanax_mexicanus
ENSAPEG00000009489	polr1d	98	66.071	ENSBTAG00000008642	POLR1D	84	66.071	Bos_taurus
ENSAPEG00000009489	polr1d	98	66.071	ENSBTAG00000033252	-	84	66.071	Bos_taurus
ENSAPEG00000009489	polr1d	82	38.710	WBGene00010230	rpac-19	56	38.750	Caenorhabditis_elegans
ENSAPEG00000009489	polr1d	98	66.964	ENSCJAG00000044669	POLR1D	84	66.964	Callithrix_jacchus
ENSAPEG00000009489	polr1d	98	66.071	ENSCAFG00000006755	POLR1D	84	66.071	Canis_familiaris
ENSAPEG00000009489	polr1d	92	68.571	ENSCHIG00000021910	POLR1D	79	68.571	Capra_hircus
ENSAPEG00000009489	polr1d	91	60.377	ENSTSYG00000034852	-	88	60.377	Carlito_syrichta
ENSAPEG00000009489	polr1d	98	66.964	ENSTSYG00000026817	-	84	66.964	Carlito_syrichta
ENSAPEG00000009489	polr1d	56	57.812	ENSCAPG00000006058	-	65	57.812	Cavia_aperea
ENSAPEG00000009489	polr1d	56	57.812	ENSCPOG00000030450	-	65	57.812	Cavia_porcellus
ENSAPEG00000009489	polr1d	98	66.964	ENSCCAG00000021349	-	84	66.964	Cebus_capucinus
ENSAPEG00000009489	polr1d	98	50.000	ENSCCAG00000020191	-	82	50.000	Cebus_capucinus
ENSAPEG00000009489	polr1d	98	66.071	ENSCATG00000030710	-	84	66.071	Cercocebus_atys
ENSAPEG00000009489	polr1d	98	57.143	ENSCATG00000022900	-	83	57.143	Cercocebus_atys
ENSAPEG00000009489	polr1d	98	66.964	ENSCLAG00000017623	POLR1D	90	66.964	Chinchilla_lanigera
ENSAPEG00000009489	polr1d	89	75.248	ENSCPBG00000004719	POLR1D	99	77.000	Chrysemys_picta_bellii
ENSAPEG00000009489	polr1d	98	65.179	ENSCANG00000037694	-	84	65.179	Colobus_angolensis_palliatus
ENSAPEG00000009489	polr1d	98	66.071	ENSCANG00000028632	-	84	66.071	Colobus_angolensis_palliatus
ENSAPEG00000009489	polr1d	98	66.964	ENSCGRG00001021251	Polr1d	84	66.964	Cricetulus_griseus_chok1gshd
ENSAPEG00000009489	polr1d	98	66.964	ENSCGRG00000011639	Polr1d	84	66.964	Cricetulus_griseus_crigri
ENSAPEG00000009489	polr1d	93	86.792	ENSCSEG00000018268	polr1d	94	86.364	Cynoglossus_semilaevis
ENSAPEG00000009489	polr1d	100	84.211	ENSCVAG00000018527	polr1d	100	84.211	Cyprinodon_variegatus
ENSAPEG00000009489	polr1d	94	74.766	ENSDARG00000037570	polr1d	95	74.766	Danio_rerio
ENSAPEG00000009489	polr1d	95	66.055	ENSDNOG00000043676	-	82	66.055	Dasypus_novemcinctus
ENSAPEG00000009489	polr1d	95	66.055	ENSDNOG00000046247	-	81	66.055	Dasypus_novemcinctus
ENSAPEG00000009489	polr1d	91	71.154	ENSDORG00000029155	Polr1d	78	71.154	Dipodomys_ordii
ENSAPEG00000009489	polr1d	75	47.191	FBgn0086447	l(2)37Cg	84	47.191	Drosophila_melanogaster
ENSAPEG00000009489	polr1d	98	66.071	ENSETEG00000012797	POLR1D	90	66.071	Echinops_telfairi
ENSAPEG00000009489	polr1d	82	62.366	ENSEBUG00000011748	polr1d	65	62.366	Eptatretus_burgeri
ENSAPEG00000009489	polr1d	92	69.524	ENSEASG00005022487	POLR1D	81	69.524	Equus_asinus_asinus
ENSAPEG00000009489	polr1d	92	69.524	ENSEEUG00000013144	POLR1D	85	69.524	Erinaceus_europaeus
ENSAPEG00000009489	polr1d	92	77.143	ENSELUG00000005105	rpac2	92	77.143	Esox_lucius
ENSAPEG00000009489	polr1d	98	66.071	ENSFCAG00000030162	POLR1D	84	66.071	Felis_catus
ENSAPEG00000009489	polr1d	88	73.000	ENSFALG00000011463	POLR1D	99	73.000	Ficedula_albicollis
ENSAPEG00000009489	polr1d	98	65.179	ENSFDAG00000004463	POLR1D	84	65.179	Fukomys_damarensis
ENSAPEG00000009489	polr1d	100	83.333	ENSFHEG00000015410	polr1d	99	83.333	Fundulus_heteroclitus
ENSAPEG00000009489	polr1d	59	67.164	ENSGALG00000007470	POLR1D	66	67.164	Gallus_gallus
ENSAPEG00000009489	polr1d	100	84.211	ENSGAFG00000001693	polr1d	100	84.211	Gambusia_affinis
ENSAPEG00000009489	polr1d	94	86.916	ENSGACG00000018585	polr1d	91	86.916	Gasterosteus_aculeatus
ENSAPEG00000009489	polr1d	100	72.807	ENSGAGG00000008503	POLR1D	100	72.807	Gopherus_agassizii
ENSAPEG00000009489	polr1d	98	66.071	ENSGGOG00000004235	POLR1D	84	66.071	Gorilla_gorilla
ENSAPEG00000009489	polr1d	100	87.719	ENSHBUG00000002111	polr1d	100	87.719	Haplochromis_burtoni
ENSAPEG00000009489	polr1d	98	64.286	ENSHGLG00000003202	POLR1D	84	64.286	Heterocephalus_glaber_female
ENSAPEG00000009489	polr1d	98	64.286	ENSHGLG00100009393	POLR1D	84	64.286	Heterocephalus_glaber_male
ENSAPEG00000009489	polr1d	100	77.193	ENSHCOG00000003258	polr1d	100	77.193	Hippocampus_comes
ENSAPEG00000009489	polr1d	96	79.817	ENSIPUG00000014810	polr1d	95	79.817	Ictalurus_punctatus
ENSAPEG00000009489	polr1d	98	66.071	ENSSTOG00000013877	POLR1D	84	66.071	Ictidomys_tridecemlineatus
ENSAPEG00000009489	polr1d	98	52.679	ENSJJAG00000021667	-	66	52.679	Jaculus_jaculus
ENSAPEG00000009489	polr1d	98	66.071	ENSJJAG00000022671	-	93	66.071	Jaculus_jaculus
ENSAPEG00000009489	polr1d	100	82.456	ENSKMAG00000015256	polr1d	100	82.456	Kryptolebias_marmoratus
ENSAPEG00000009489	polr1d	100	86.842	ENSLBEG00000015919	polr1d	100	86.842	Labrus_bergylta
ENSAPEG00000009489	polr1d	91	66.346	ENSLACG00000006810	POLR1D	87	66.346	Latimeria_chalumnae
ENSAPEG00000009489	polr1d	61	79.710	ENSLOCG00000014976	polr1d	93	79.710	Lepisosteus_oculatus
ENSAPEG00000009489	polr1d	92	69.524	ENSLAFG00000032290	POLR1D	79	69.524	Loxodonta_africana
ENSAPEG00000009489	polr1d	98	66.071	ENSMFAG00000045264	POLR1D	87	66.071	Macaca_fascicularis
ENSAPEG00000009489	polr1d	75	60.465	ENSMMUG00000041570	-	77	60.465	Macaca_mulatta
ENSAPEG00000009489	polr1d	98	66.071	ENSMMUG00000020386	POLR1D	97	66.071	Macaca_mulatta
ENSAPEG00000009489	polr1d	98	66.071	ENSMNEG00000008630	-	84	66.071	Macaca_nemestrina
ENSAPEG00000009489	polr1d	98	52.679	ENSMNEG00000038120	-	83	52.679	Macaca_nemestrina
ENSAPEG00000009489	polr1d	98	57.143	ENSMLEG00000032251	-	83	57.143	Mandrillus_leucophaeus
ENSAPEG00000009489	polr1d	98	66.071	ENSMLEG00000041048	-	84	66.071	Mandrillus_leucophaeus
ENSAPEG00000009489	polr1d	89	87.255	ENSMAMG00000014834	polr1d	95	87.255	Mastacembelus_armatus
ENSAPEG00000009489	polr1d	90	89.320	ENSMZEG00005006638	polr1d	91	89.320	Maylandia_zebra
ENSAPEG00000009489	polr1d	82	78.723	ENSMGAG00000005322	POLR1D	86	78.723	Meleagris_gallopavo
ENSAPEG00000009489	polr1d	98	66.964	ENSMAUG00000001946	Polr1d	84	66.964	Mesocricetus_auratus
ENSAPEG00000009489	polr1d	98	65.179	ENSMICG00000016883	-	84	65.179	Microcebus_murinus
ENSAPEG00000009489	polr1d	86	58.163	ENSMICG00000007349	-	73	58.163	Microcebus_murinus
ENSAPEG00000009489	polr1d	98	66.071	ENSMOCG00000021288	Polr1d	84	66.071	Microtus_ochrogaster
ENSAPEG00000009489	polr1d	100	87.719	ENSMMOG00000009605	polr1d	100	87.719	Mola_mola
ENSAPEG00000009489	polr1d	100	71.053	ENSMODG00000023881	POLR1D	100	71.053	Monodelphis_domestica
ENSAPEG00000009489	polr1d	100	84.211	ENSMALG00000010652	polr1d	100	84.211	Monopterus_albus
ENSAPEG00000009489	polr1d	91	69.231	MGP_CAROLIEiJ_G0028034	Polr1d	78	69.231	Mus_caroli
ENSAPEG00000009489	polr1d	98	65.179	ENSMUSG00000029642	Polr1d	84	65.179	Mus_musculus
ENSAPEG00000009489	polr1d	91	69.231	MGP_PahariEiJ_G0024600	Polr1d	78	69.231	Mus_pahari
ENSAPEG00000009489	polr1d	98	64.286	MGP_SPRETEiJ_G0029032	Polr1d	84	64.286	Mus_spretus
ENSAPEG00000009489	polr1d	98	58.929	ENSMLUG00000004118	-	84	58.929	Myotis_lucifugus
ENSAPEG00000009489	polr1d	86	72.449	ENSMLUG00000027169	-	74	72.449	Myotis_lucifugus
ENSAPEG00000009489	polr1d	98	67.857	ENSNGAG00000006014	Polr1d	97	67.857	Nannospalax_galili
ENSAPEG00000009489	polr1d	100	87.719	ENSNBRG00000020327	polr1d	100	87.719	Neolamprologus_brichardi
ENSAPEG00000009489	polr1d	98	66.071	ENSNLEG00000000358	POLR1D	84	66.071	Nomascus_leucogenys
ENSAPEG00000009489	polr1d	98	66.964	ENSODEG00000005294	-	84	66.964	Octodon_degus
ENSAPEG00000009489	polr1d	98	56.250	ENSODEG00000014801	-	82	56.250	Octodon_degus
ENSAPEG00000009489	polr1d	93	75.472	ENSOANG00000008708	-	98	75.472	Ornithorhynchus_anatinus
ENSAPEG00000009489	polr1d	98	66.071	ENSOCUG00000015706	POLR1D	69	66.071	Oryctolagus_cuniculus
ENSAPEG00000009489	polr1d	100	79.825	ENSORLG00000010257	polr1d	100	79.825	Oryzias_latipes
ENSAPEG00000009489	polr1d	100	79.825	ENSORLG00020000533	polr1d	77	79.825	Oryzias_latipes_hni
ENSAPEG00000009489	polr1d	100	80.702	ENSORLG00015013267	polr1d	75	80.702	Oryzias_latipes_hsok
ENSAPEG00000009489	polr1d	100	80.702	ENSOMEG00000014912	polr1d	76	80.702	Oryzias_melastigma
ENSAPEG00000009489	polr1d	98	66.964	ENSOGAG00000014601	POLR1D	84	66.964	Otolemur_garnettii
ENSAPEG00000009489	polr1d	98	65.179	ENSOARG00000017005	POLR1D	86	65.179	Ovis_aries
ENSAPEG00000009489	polr1d	95	66.972	ENSPPAG00000028138	POLR1D	82	66.972	Pan_paniscus
ENSAPEG00000009489	polr1d	98	66.071	ENSPPRG00000003381	POLR1D	84	66.071	Panthera_pardus
ENSAPEG00000009489	polr1d	98	66.071	ENSPTIG00000018137	POLR1D	84	66.071	Panthera_tigris_altaica
ENSAPEG00000009489	polr1d	98	66.071	ENSPTRG00000005734	POLR1D	84	66.071	Pan_troglodytes
ENSAPEG00000009489	polr1d	98	56.250	ENSPANG00000035051	-	83	56.250	Papio_anubis
ENSAPEG00000009489	polr1d	98	66.071	ENSPANG00000020259	-	84	66.071	Papio_anubis
ENSAPEG00000009489	polr1d	89	78.218	ENSPKIG00000021891	polr1d	98	59.200	Paramormyrops_kingsleyae
ENSAPEG00000009489	polr1d	100	70.175	ENSPSIG00000011822	POLR1D	88	70.175	Pelodiscus_sinensis
ENSAPEG00000009489	polr1d	96	79.817	ENSPMGG00000010359	polr1d	95	79.817	Periophthalmus_magnuspinnatus
ENSAPEG00000009489	polr1d	96	69.725	ENSPMGG00000012998	POLR1D	80	69.725	Periophthalmus_magnuspinnatus
ENSAPEG00000009489	polr1d	98	66.964	ENSPEMG00000006336	-	86	66.964	Peromyscus_maniculatus_bairdii
ENSAPEG00000009489	polr1d	93	60.377	ENSPMAG00000004228	polr1d	88	60.377	Petromyzon_marinus
ENSAPEG00000009489	polr1d	100	70.175	ENSPCIG00000001673	POLR1D	100	70.175	Phascolarctos_cinereus
ENSAPEG00000009489	polr1d	100	85.088	ENSPFOG00000023343	polr1d	100	85.088	Poecilia_formosa
ENSAPEG00000009489	polr1d	100	85.088	ENSPLAG00000009675	polr1d	100	85.088	Poecilia_latipinna
ENSAPEG00000009489	polr1d	100	85.088	ENSPMEG00000004628	polr1d	100	85.088	Poecilia_mexicana
ENSAPEG00000009489	polr1d	100	85.088	ENSPREG00000022032	polr1d	100	85.088	Poecilia_reticulata
ENSAPEG00000009489	polr1d	98	64.286	ENSPCOG00000028175	POLR1D	84	64.286	Propithecus_coquereli
ENSAPEG00000009489	polr1d	100	87.719	ENSPNYG00000000107	polr1d	100	87.719	Pundamilia_nyererei
ENSAPEG00000009489	polr1d	96	74.312	ENSPNAG00000001512	polr1d	92	74.312	Pygocentrus_nattereri
ENSAPEG00000009489	polr1d	98	66.071	ENSRBIG00000036378	-	84	66.071	Rhinopithecus_bieti
ENSAPEG00000009489	polr1d	98	63.393	ENSRBIG00000000336	-	84	63.393	Rhinopithecus_bieti
ENSAPEG00000009489	polr1d	98	64.286	ENSRROG00000026751	-	84	64.286	Rhinopithecus_roxellana
ENSAPEG00000009489	polr1d	98	66.071	ENSRROG00000042232	-	84	66.071	Rhinopithecus_roxellana
ENSAPEG00000009489	polr1d	82	50.538	YNL113W	RPC19	72	47.059	Saccharomyces_cerevisiae
ENSAPEG00000009489	polr1d	89	68.317	ENSSBOG00000030146	-	74	68.317	Saimiri_boliviensis_boliviensis
ENSAPEG00000009489	polr1d	98	66.071	ENSSBOG00000028482	-	84	66.071	Saimiri_boliviensis_boliviensis
ENSAPEG00000009489	polr1d	96	69.091	ENSSHAG00000001190	POLR1D	85	69.091	Sarcophilus_harrisii
ENSAPEG00000009489	polr1d	99	72.566	ENSSFOG00015011375	polr1d	98	72.566	Scleropages_formosus
ENSAPEG00000009489	polr1d	100	85.088	ENSSMAG00000011861	polr1d	100	85.088	Scophthalmus_maximus
ENSAPEG00000009489	polr1d	100	85.088	ENSSDUG00000011930	polr1d	100	85.088	Seriola_dumerili
ENSAPEG00000009489	polr1d	89	87.255	ENSSLDG00000023871	polr1d	86	87.255	Seriola_lalandi_dorsalis
ENSAPEG00000009489	polr1d	92	69.524	ENSSARG00000007840	POLR1D	79	69.524	Sorex_araneus
ENSAPEG00000009489	polr1d	92	72.381	ENSSPUG00000005786	POLR1D	95	69.369	Sphenodon_punctatus
ENSAPEG00000009489	polr1d	100	91.228	ENSSPAG00000011764	polr1d	100	91.228	Stegastes_partitus
ENSAPEG00000009489	polr1d	92	69.524	ENSSSCG00000009310	POLR1D	79	69.524	Sus_scrofa
ENSAPEG00000009489	polr1d	82	78.495	ENSTGUG00000005450	POLR1D	97	78.495	Taeniopygia_guttata
ENSAPEG00000009489	polr1d	100	78.947	ENSTRUG00000019741	polr1d	100	78.947	Takifugu_rubripes
ENSAPEG00000009489	polr1d	98	66.071	ENSTBEG00000007006	POLR1D	90	66.071	Tupaia_belangeri
ENSAPEG00000009489	polr1d	98	66.071	ENSUAMG00000011413	POLR1D	84	66.071	Ursus_americanus
ENSAPEG00000009489	polr1d	98	66.071	ENSUMAG00000016968	POLR1D	88	66.071	Ursus_maritimus
ENSAPEG00000009489	polr1d	98	66.071	ENSVVUG00000009216	POLR1D	84	66.071	Vulpes_vulpes
ENSAPEG00000009489	polr1d	91	84.615	ENSXCOG00000011731	polr1d	77	88.000	Xiphophorus_couchianus
ENSAPEG00000009489	polr1d	91	85.577	ENSXMAG00000017538	polr1d	77	89.000	Xiphophorus_maculatus