EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000009498 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 11755 bases
Position: chr23:18930462-18942216
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000013376	KH_1	PF00013.29	4.4e-06	1	1
ENSAPEP00000013376	zf-CCHC	PF00098.23	0.00051	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000013732	-	3805	-	ENSAPEP00000013376	677 (aa)	-	UPI000C30F3B9

Gene Model

Click here to download ENSAPEG00000009498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000009498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000009498	sf1	100	98.968	ENSAPOG00000012341	sf1	100	98.968	Acanthochromis_polyacanthus
ENSAPEG00000009498	sf1	100	100.000	ENSAOCG00000010934	sf1	100	100.000	Amphiprion_ocellaris
ENSAPEG00000009498	sf1	67	92.325	ENSATEG00000001894	sf1	97	94.091	Anabas_testudineus
ENSAPEG00000009498	sf1	61	76.744	ENSANAG00000026664	-	90	80.412	Aotus_nancymaae
ENSAPEG00000009498	sf1	84	65.568	ENSANAG00000022607	-	88	72.654	Aotus_nancymaae
ENSAPEG00000009498	sf1	67	90.989	ENSACLG00000007633	sf1	97	87.311	Astatotilapia_calliptera
ENSAPEG00000009498	sf1	97	87.253	ENSAMXG00000003630	sf1	86	86.778	Astyanax_mexicanus
ENSAPEG00000009498	sf1	61	75.878	ENSBTAG00000001035	SF1	63	80.412	Bos_taurus
ENSAPEG00000009498	sf1	61	75.878	ENSCJAG00000002780	SF1	75	68.085	Callithrix_jacchus
ENSAPEG00000009498	sf1	61	75.878	ENSCAFG00000014239	SF1	59	80.155	Canis_familiaris
ENSAPEG00000009498	sf1	61	75.878	ENSCAFG00020014381	SF1	59	80.412	Canis_lupus_dingo
ENSAPEG00000009498	sf1	61	75.878	ENSCHIG00000025867	SF1	69	80.155	Capra_hircus
ENSAPEG00000009498	sf1	58	76.998	ENSCAPG00000010762	SF1	65	81.818	Cavia_aperea
ENSAPEG00000009498	sf1	59	76.794	ENSCPOG00000012290	SF1	68	81.551	Cavia_porcellus
ENSAPEG00000009498	sf1	59	71.046	ENSCCAG00000023781	-	71	78.378	Cebus_capucinus
ENSAPEG00000009498	sf1	61	76.056	ENSCCAG00000037881	SF1	90	80.412	Cebus_capucinus
ENSAPEG00000009498	sf1	61	75.878	ENSCATG00000011564	SF1	90	80.412	Cercocebus_atys
ENSAPEG00000009498	sf1	61	75.878	ENSCSAG00000007258	SF1	69	80.155	Chlorocebus_sabaeus
ENSAPEG00000009498	sf1	56	71.571	ENSCHOG00000006008	SF1	66	75.766	Choloepus_hoffmanni
ENSAPEG00000009498	sf1	62	81.860	ENSCPBG00000023763	SF1	50	84.010	Chrysemys_picta_bellii
ENSAPEG00000009498	sf1	60	55.687	ENSCING00000005564	-	87	57.045	Ciona_intestinalis
ENSAPEG00000009498	sf1	61	52.914	ENSCSAVG00000009055	-	64	65.074	Ciona_savignyi
ENSAPEG00000009498	sf1	61	75.878	ENSCANG00000042201	SF1	91	80.412	Colobus_angolensis_palliatus
ENSAPEG00000009498	sf1	61	76.047	ENSCGRG00001003677	Sf1	66	80.412	Cricetulus_griseus_chok1gshd
ENSAPEG00000009498	sf1	60	76.471	ENSCGRG00000001708	Sf1	69	80.940	Cricetulus_griseus_crigri
ENSAPEG00000009498	sf1	97	90.332	ENSCSEG00000014375	sf1	94	90.303	Cynoglossus_semilaevis
ENSAPEG00000009498	sf1	98	89.744	ENSCVAG00000001670	sf1	97	89.394	Cyprinodon_variegatus
ENSAPEG00000009498	sf1	86	84.111	ENSDARG00000008188	sf1	69	89.474	Danio_rerio
ENSAPEG00000009498	sf1	61	76.815	ENSDNOG00000001282	SF1	69	80.155	Dasypus_novemcinctus
ENSAPEG00000009498	sf1	61	75.878	ENSDORG00000016334	Sf1	59	80.412	Dipodomys_ordii
ENSAPEG00000009498	sf1	61	76.112	ENSEASG00005018272	SF1	69	80.412	Equus_asinus_asinus
ENSAPEG00000009498	sf1	61	76.112	ENSECAG00000024544	SF1	69	80.412	Equus_caballus
ENSAPEG00000009498	sf1	53	77.273	ENSEEUG00000001058	SF1	83	81.737	Erinaceus_europaeus
ENSAPEG00000009498	sf1	78	78.212	ENSELUG00000013225	sf1	64	82.172	Esox_lucius
ENSAPEG00000009498	sf1	61	75.878	ENSFCAG00000012231	SF1	75	68.616	Felis_catus
ENSAPEG00000009498	sf1	58	76.998	ENSFDAG00000009833	SF1	65	81.818	Fukomys_damarensis
ENSAPEG00000009498	sf1	97	89.074	ENSFHEG00000022656	sf1	97	88.771	Fundulus_heteroclitus
ENSAPEG00000009498	sf1	72	76.327	ENSGMOG00000007469	sf1	62	92.105	Gadus_morhua
ENSAPEG00000009498	sf1	89	89.109	ENSGAFG00000019284	sf1	98	89.109	Gambusia_affinis
ENSAPEG00000009498	sf1	62	81.628	ENSGAGG00000021691	SF1	71	70.680	Gopherus_agassizii
ENSAPEG00000009498	sf1	67	92.763	ENSHBUG00000011598	sf1	97	93.656	Haplochromis_burtoni
ENSAPEG00000009498	sf1	61	75.878	ENSHGLG00000009541	SF1	66	80.412	Heterocephalus_glaber_female
ENSAPEG00000009498	sf1	61	65.996	ENSHGLG00100008255	-	74	71.134	Heterocephalus_glaber_male
ENSAPEG00000009498	sf1	58	76.998	ENSHGLG00100013879	-	65	81.818	Heterocephalus_glaber_male
ENSAPEG00000009498	sf1	69	87.500	ENSHCOG00000011388	sf1	97	87.595	Hippocampus_comes
ENSAPEG00000009498	sf1	58	76.998	ENSSTOG00000009790	-	58	81.818	Ictidomys_tridecemlineatus
ENSAPEG00000009498	sf1	55	70.130	ENSSTOG00000024353	-	68	70.801	Ictidomys_tridecemlineatus
ENSAPEG00000009498	sf1	61	76.112	ENSJJAG00000011788	Sf1	59	80.670	Jaculus_jaculus
ENSAPEG00000009498	sf1	84	91.404	ENSKMAG00000005854	sf1	91	90.588	Kryptolebias_marmoratus
ENSAPEG00000009498	sf1	97	79.279	ENSLBEG00000019836	sf1	75	89.605	Labrus_bergylta
ENSAPEG00000009498	sf1	60	77.184	ENSLACG00000018493	SF1	68	78.933	Latimeria_chalumnae
ENSAPEG00000009498	sf1	67	80.550	ENSLOCG00000002130	sf1	70	79.839	Lepisosteus_oculatus
ENSAPEG00000009498	sf1	59	79.376	ENSLAFG00000007201	SF1	63	83.733	Loxodonta_africana
ENSAPEG00000009498	sf1	61	75.878	ENSMFAG00000033122	SF1	90	80.412	Macaca_fascicularis
ENSAPEG00000009498	sf1	61	75.878	ENSMMUG00000022606	SF1	90	81.266	Macaca_mulatta
ENSAPEG00000009498	sf1	61	75.878	ENSMNEG00000037901	SF1	90	80.412	Macaca_nemestrina
ENSAPEG00000009498	sf1	59	76.555	ENSMLEG00000040706	SF1	90	80.779	Mandrillus_leucophaeus
ENSAPEG00000009498	sf1	100	96.171	ENSMAMG00000001780	sf1	100	96.171	Mastacembelus_armatus
ENSAPEG00000009498	sf1	67	92.763	ENSMZEG00005009196	sf1	97	93.656	Maylandia_zebra
ENSAPEG00000009498	sf1	61	76.047	ENSMAUG00000014064	Sf1	66	80.412	Mesocricetus_auratus
ENSAPEG00000009498	sf1	61	75.878	ENSMICG00000001202	SF1	90	80.206	Microcebus_murinus
ENSAPEG00000009498	sf1	61	76.112	ENSMOCG00000022038	Sf1	66	80.412	Microtus_ochrogaster
ENSAPEG00000009498	sf1	86	88.124	ENSMMOG00000020474	sf1	87	89.813	Mola_mola
ENSAPEG00000009498	sf1	59	77.327	ENSMODG00000029407	SF1	80	81.794	Monodelphis_domestica
ENSAPEG00000009498	sf1	84	86.268	ENSMALG00000020521	sf1	92	88.556	Monopterus_albus
ENSAPEG00000009498	sf1	61	76.047	MGP_CAROLIEiJ_G0022607	Sf1	99	94.737	Mus_caroli
ENSAPEG00000009498	sf1	61	76.047	ENSMUSG00000024949	Sf1	99	94.737	Mus_musculus
ENSAPEG00000009498	sf1	61	76.047	MGP_PahariEiJ_G0014101	Sf1	99	94.737	Mus_pahari
ENSAPEG00000009498	sf1	61	76.047	MGP_SPRETEiJ_G0023518	Sf1	99	94.737	Mus_spretus
ENSAPEG00000009498	sf1	60	76.112	ENSMPUG00000012684	SF1	58	81.530	Mustela_putorius_furo
ENSAPEG00000009498	sf1	64	73.068	ENSMLUG00000029800	-	65	76.546	Myotis_lucifugus
ENSAPEG00000009498	sf1	59	77.033	ENSMLUG00000015217	-	58	82.058	Myotis_lucifugus
ENSAPEG00000009498	sf1	61	76.112	ENSNGAG00000005550	Sf1	66	80.670	Nannospalax_galili
ENSAPEG00000009498	sf1	61	75.878	ENSNLEG00000005236	-	91	80.412	Nomascus_leucogenys
ENSAPEG00000009498	sf1	58	77.561	ENSMEUG00000013424	SF1	68	81.941	Notamacropus_eugenii
ENSAPEG00000009498	sf1	53	76.676	ENSOPRG00000005008	SF1	66	81.737	Ochotona_princeps
ENSAPEG00000009498	sf1	67	92.544	ENSONIG00000015728	sf1	97	93.202	Oreochromis_niloticus
ENSAPEG00000009498	sf1	59	76.722	ENSOCUG00000026486	SF1	59	81.266	Oryctolagus_cuniculus
ENSAPEG00000009498	sf1	69	87.447	ENSORLG00000011853	sf1	69	86.555	Oryzias_latipes
ENSAPEG00000009498	sf1	69	87.872	ENSORLG00020011834	sf1	69	86.975	Oryzias_latipes_hni
ENSAPEG00000009498	sf1	68	87.773	ENSORLG00015012855	sf1	69	86.765	Oryzias_latipes_hsok
ENSAPEG00000009498	sf1	97	89.514	ENSOMEG00000005210	sf1	97	89.210	Oryzias_melastigma
ENSAPEG00000009498	sf1	61	75.814	ENSOGAG00000016196	SF1	59	80.155	Otolemur_garnettii
ENSAPEG00000009498	sf1	61	75.878	ENSOARG00000009166	SF1	66	80.155	Ovis_aries
ENSAPEG00000009498	sf1	59	77.644	ENSPPAG00000002799	-	90	81.530	Pan_paniscus
ENSAPEG00000009498	sf1	59	76.794	ENSPPRG00000013566	SF1	57	82.825	Panthera_pardus
ENSAPEG00000009498	sf1	59	76.794	ENSPTIG00000016141	SF1	66	81.530	Panthera_tigris_altaica
ENSAPEG00000009498	sf1	62	76.027	ENSPTRG00000003846	SF1	91	80.412	Pan_troglodytes
ENSAPEG00000009498	sf1	61	75.878	ENSPANG00000020754	SF1	90	80.412	Papio_anubis
ENSAPEG00000009498	sf1	61	76.047	ENSPEMG00000010463	Sf1	66	80.412	Peromyscus_maniculatus_bairdii
ENSAPEG00000009498	sf1	61	76.347	ENSPCIG00000018173	SF1	61	80.670	Phascolarctos_cinereus
ENSAPEG00000009498	sf1	97	90.288	ENSPFOG00000013683	sf1	97	90.288	Poecilia_formosa
ENSAPEG00000009498	sf1	90	89.886	ENSPLAG00000018076	sf1	93	89.723	Poecilia_latipinna
ENSAPEG00000009498	sf1	97	90.288	ENSPMEG00000005726	sf1	97	90.288	Poecilia_mexicana
ENSAPEG00000009498	sf1	97	89.681	ENSPREG00000004155	sf1	97	89.681	Poecilia_reticulata
ENSAPEG00000009498	sf1	61	75.878	ENSPPYG00000003098	-	71	80.155	Pongo_abelii
ENSAPEG00000009498	sf1	59	76.777	ENSPCAG00000013631	SF1	75	67.969	Procavia_capensis
ENSAPEG00000009498	sf1	61	75.878	ENSPCOG00000027546	SF1	90	80.206	Propithecus_coquereli
ENSAPEG00000009498	sf1	59	77.751	ENSPVAG00000016938	SF1	75	69.685	Pteropus_vampyrus
ENSAPEG00000009498	sf1	67	92.982	ENSPNYG00000004673	sf1	97	93.051	Pundamilia_nyererei
ENSAPEG00000009498	sf1	97	85.714	ENSPNAG00000013072	sf1	97	85.714	Pygocentrus_nattereri
ENSAPEG00000009498	sf1	61	76.047	ENSRNOG00000021085	Sf1	60	80.645	Rattus_norvegicus
ENSAPEG00000009498	sf1	61	75.878	ENSRBIG00000042818	SF1	91	80.155	Rhinopithecus_bieti
ENSAPEG00000009498	sf1	60	76.112	ENSRROG00000045655	SF1	91	80.779	Rhinopithecus_roxellana
ENSAPEG00000009498	sf1	86	62.761	ENSSBOG00000022267	-	90	66.240	Saimiri_boliviensis_boliviensis
ENSAPEG00000009498	sf1	72	70.791	ENSSHAG00000006841	SF1	70	82.940	Sarcophilus_harrisii
ENSAPEG00000009498	sf1	71	80.825	ENSSFOG00015021978	sf1	69	80.705	Scleropages_formosus
ENSAPEG00000009498	sf1	84	90.017	ENSSMAG00000007549	sf1	75	89.571	Scophthalmus_maximus
ENSAPEG00000009498	sf1	67	94.530	ENSSDUG00000003903	sf1	98	95.938	Seriola_dumerili
ENSAPEG00000009498	sf1	58	72.356	ENSSARG00000008180	SF1	71	77.005	Sorex_araneus
ENSAPEG00000009498	sf1	59	79.720	ENSSPUG00000012907	SF1	58	86.723	Sphenodon_punctatus
ENSAPEG00000009498	sf1	100	97.489	ENSSPAG00000019060	sf1	100	97.489	Stegastes_partitus
ENSAPEG00000009498	sf1	61	76.815	ENSSSCG00000013021	SF1	69	80.155	Sus_scrofa
ENSAPEG00000009498	sf1	73	70.818	ENSTNIG00000004820	sf1	77	73.986	Tetraodon_nigroviridis
ENSAPEG00000009498	sf1	58	72.277	ENSTBEG00000013133	SF1	53	75.890	Tupaia_belangeri
ENSAPEG00000009498	sf1	58	71.875	ENSTTRG00000008857	SF1	67	75.668	Tursiops_truncatus
ENSAPEG00000009498	sf1	60	78.487	ENSUMAG00000007268	SF1	71	80.155	Ursus_maritimus
ENSAPEG00000009498	sf1	61	75.878	ENSVVUG00000028585	SF1	69	80.155	Vulpes_vulpes
ENSAPEG00000009498	sf1	85	73.254	ENSXETG00000008434	sf1	62	86.264	Xenopus_tropicalis
ENSAPEG00000009498	sf1	54	93.973	ENSXCOG00000003704	sf1	73	91.710	Xiphophorus_couchianus
ENSAPEG00000009498	sf1	97	90.744	ENSXMAG00000007822	sf1	97	90.592	Xiphophorus_maculatus