EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000009537 (Gene tree)
Gene ID: -
Gene Symbol: a1cf
Alias: acf
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 15391 bases
Position: chr19:6928559-6943949
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000013418	DND1_DSRM	PF14709.7	9.8e-26	1	1
ENSAPEP00000013418	RRM_1	PF00076.22	4.3e-41	1	3
ENSAPEP00000013418	RRM_1	PF00076.22	4.3e-41	2	3
ENSAPEP00000013418	RRM_1	PF00076.22	4.3e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000013776	-	2056	-	ENSAPEP00000013418	596 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000009537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000009537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000009537	a1cf	91	53.211	ENSAPEG00000018304	rbm47	80	51.361
ENSAPEG00000009537	a1cf	87	64.561	ENSAPEG00000017762	rbm46	97	64.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000009537	a1cf	100	75.738	ENSG00000148584	A1CF	100	87.624	Homo_sapiens
ENSAPEG00000009537	a1cf	100	95.082	ENSAPOG00000008259	a1cf	100	95.082	Acanthochromis_polyacanthus
ENSAPEG00000009537	a1cf	100	75.041	ENSAMEG00000000523	A1CF	100	74.877	Ailuropoda_melanoleuca
ENSAPEG00000009537	a1cf	100	84.553	ENSACIG00000008632	a1cf	100	84.553	Amphilophus_citrinellus
ENSAPEG00000009537	a1cf	100	98.490	ENSAOCG00000023744	a1cf	100	98.490	Amphiprion_ocellaris
ENSAPEG00000009537	a1cf	100	88.525	ENSATEG00000013720	a1cf	100	87.377	Anabas_testudineus
ENSAPEG00000009537	a1cf	100	75.534	ENSAPLG00000002964	A1CF	100	74.548	Anas_platyrhynchos
ENSAPEG00000009537	a1cf	100	74.342	ENSACAG00000015269	A1CF	100	73.191	Anolis_carolinensis
ENSAPEG00000009537	a1cf	100	75.246	ENSANAG00000019974	A1CF	100	74.426	Aotus_nancymaae
ENSAPEG00000009537	a1cf	100	85.572	ENSACLG00000017428	a1cf	100	85.572	Astatotilapia_calliptera
ENSAPEG00000009537	a1cf	100	75.487	ENSAMXG00000018180	a1cf	100	75.325	Astyanax_mexicanus
ENSAPEG00000009537	a1cf	100	74.795	ENSBTAG00000021195	A1CF	97	76.980	Bos_taurus
ENSAPEG00000009537	a1cf	100	76.230	ENSCJAG00000005045	A1CF	100	75.410	Callithrix_jacchus
ENSAPEG00000009537	a1cf	100	75.124	ENSCAFG00000015581	A1CF	100	74.507	Canis_familiaris
ENSAPEG00000009537	a1cf	100	75.124	ENSCAFG00020026421	A1CF	98	83.278	Canis_lupus_dingo
ENSAPEG00000009537	a1cf	100	76.432	ENSCHIG00000020411	A1CF	100	75.614	Capra_hircus
ENSAPEG00000009537	a1cf	97	73.667	ENSTSYG00000001755	A1CF	100	74.261	Carlito_syrichta
ENSAPEG00000009537	a1cf	100	74.052	ENSCAPG00000017386	A1CF	100	73.469	Cavia_aperea
ENSAPEG00000009537	a1cf	100	75.410	ENSCPOG00000009807	A1CF	100	74.590	Cavia_porcellus
ENSAPEG00000009537	a1cf	100	76.026	ENSCCAG00000018168	A1CF	100	75.205	Cebus_capucinus
ENSAPEG00000009537	a1cf	100	74.877	ENSCATG00000043715	A1CF	100	74.056	Cercocebus_atys
ENSAPEG00000009537	a1cf	100	75.123	ENSCLAG00000010424	A1CF	100	74.959	Chinchilla_lanigera
ENSAPEG00000009537	a1cf	100	76.026	ENSCSAG00000007032	A1CF	100	75.205	Chlorocebus_sabaeus
ENSAPEG00000009537	a1cf	97	71.570	ENSCHOG00000009089	A1CF	98	70.744	Choloepus_hoffmanni
ENSAPEG00000009537	a1cf	100	76.190	ENSCPBG00000026464	A1CF	100	75.041	Chrysemys_picta_bellii
ENSAPEG00000009537	a1cf	100	76.026	ENSCANG00000038032	A1CF	100	75.205	Colobus_angolensis_palliatus
ENSAPEG00000009537	a1cf	100	75.123	ENSCGRG00001017413	A1cf	100	74.468	Cricetulus_griseus_chok1gshd
ENSAPEG00000009537	a1cf	100	74.346	ENSCGRG00000017332	A1cf	100	73.977	Cricetulus_griseus_crigri
ENSAPEG00000009537	a1cf	100	84.992	ENSCSEG00000002361	a1cf	100	84.829	Cynoglossus_semilaevis
ENSAPEG00000009537	a1cf	100	87.213	ENSCVAG00000010520	a1cf	100	87.541	Cyprinodon_variegatus
ENSAPEG00000009537	a1cf	100	80.992	ENSDARG00000002968	a1cf	100	79.669	Danio_rerio
ENSAPEG00000009537	a1cf	100	75.410	ENSDNOG00000002829	A1CF	100	74.590	Dasypus_novemcinctus
ENSAPEG00000009537	a1cf	80	84.058	ENSETEG00000012527	A1CF	81	84.058	Echinops_telfairi
ENSAPEG00000009537	a1cf	100	75.693	ENSEASG00005012924	A1CF	100	75.041	Equus_asinus_asinus
ENSAPEG00000009537	a1cf	100	75.367	ENSECAG00000010424	A1CF	100	74.715	Equus_caballus
ENSAPEG00000009537	a1cf	80	66.250	ENSEEUG00000000013	A1CF	97	65.948	Erinaceus_europaeus
ENSAPEG00000009537	a1cf	100	81.117	ENSELUG00000003159	a1cf	100	79.803	Esox_lucius
ENSAPEG00000009537	a1cf	100	73.563	ENSFCAG00000011179	A1CF	100	73.563	Felis_catus
ENSAPEG00000009537	a1cf	100	75.862	ENSFALG00000013183	A1CF	100	75.041	Ficedula_albicollis
ENSAPEG00000009537	a1cf	100	73.977	ENSFDAG00000019371	A1CF	100	73.159	Fukomys_damarensis
ENSAPEG00000009537	a1cf	100	80.328	ENSFHEG00000019652	a1cf	96	89.844	Fundulus_heteroclitus
ENSAPEG00000009537	a1cf	100	79.835	ENSGMOG00000018943	a1cf	100	79.835	Gadus_morhua
ENSAPEG00000009537	a1cf	94	75.868	ENSGALG00000003765	A1CF	96	75.174	Gallus_gallus
ENSAPEG00000009537	a1cf	100	79.805	ENSGAFG00000014868	a1cf	100	79.412	Gambusia_affinis
ENSAPEG00000009537	a1cf	100	85.621	ENSGACG00000010241	a1cf	100	84.804	Gasterosteus_aculeatus
ENSAPEG00000009537	a1cf	96	75.171	ENSGAGG00000016508	A1CF	98	73.973	Gopherus_agassizii
ENSAPEG00000009537	a1cf	100	75.738	ENSGGOG00000009670	A1CF	100	74.918	Gorilla_gorilla
ENSAPEG00000009537	a1cf	100	85.691	ENSHBUG00000021959	a1cf	100	85.854	Haplochromis_burtoni
ENSAPEG00000009537	a1cf	100	74.959	ENSHGLG00000008955	A1CF	100	74.468	Heterocephalus_glaber_female
ENSAPEG00000009537	a1cf	100	74.304	ENSHGLG00100000518	A1CF	100	73.813	Heterocephalus_glaber_male
ENSAPEG00000009537	a1cf	100	76.175	ENSHCOG00000017669	a1cf	100	77.073	Hippocampus_comes
ENSAPEG00000009537	a1cf	91	85.609	ENSIPUG00000010367	a1cf	95	84.133	Ictalurus_punctatus
ENSAPEG00000009537	a1cf	100	87.967	ENSKMAG00000006568	a1cf	100	88.130	Kryptolebias_marmoratus
ENSAPEG00000009537	a1cf	99	89.198	ENSLBEG00000020994	a1cf	99	88.380	Labrus_bergylta
ENSAPEG00000009537	a1cf	100	78.146	ENSLACG00000008061	A1CF	100	76.355	Latimeria_chalumnae
ENSAPEG00000009537	a1cf	100	80.952	ENSLOCG00000006302	a1cf	100	79.803	Lepisosteus_oculatus
ENSAPEG00000009537	a1cf	100	74.959	ENSLAFG00000015462	A1CF	100	75.286	Loxodonta_africana
ENSAPEG00000009537	a1cf	100	74.877	ENSMFAG00000035948	A1CF	100	74.056	Macaca_fascicularis
ENSAPEG00000009537	a1cf	100	74.877	ENSMMUG00000007077	A1CF	100	74.056	Macaca_mulatta
ENSAPEG00000009537	a1cf	100	74.713	ENSMNEG00000031454	A1CF	100	73.892	Macaca_nemestrina
ENSAPEG00000009537	a1cf	100	76.026	ENSMLEG00000037223	A1CF	100	75.205	Mandrillus_leucophaeus
ENSAPEG00000009537	a1cf	100	85.458	ENSMAMG00000010402	a1cf	100	85.294	Mastacembelus_armatus
ENSAPEG00000009537	a1cf	100	86.921	ENSMZEG00005013245	a1cf	100	85.265	Maylandia_zebra
ENSAPEG00000009537	a1cf	100	75.410	ENSMGAG00000001507	A1CF	100	74.754	Meleagris_gallopavo
ENSAPEG00000009537	a1cf	100	74.795	ENSMAUG00000007422	A1cf	100	74.141	Mesocricetus_auratus
ENSAPEG00000009537	a1cf	100	73.779	ENSMICG00000003377	A1CF	100	73.941	Microcebus_murinus
ENSAPEG00000009537	a1cf	100	75.614	ENSMOCG00000021536	A1cf	100	74.959	Microtus_ochrogaster
ENSAPEG00000009537	a1cf	100	76.833	ENSMMOG00000009422	a1cf	100	77.667	Mola_mola
ENSAPEG00000009537	a1cf	94	76.029	ENSMODG00000016478	A1CF	99	75.850	Monodelphis_domestica
ENSAPEG00000009537	a1cf	100	79.967	ENSMALG00000012992	a1cf	100	79.833	Monopterus_albus
ENSAPEG00000009537	a1cf	100	74.632	MGP_CAROLIEiJ_G0022873	A1cf	100	73.977	Mus_caroli
ENSAPEG00000009537	a1cf	100	74.632	ENSMUSG00000052595	A1cf	99	83.278	Mus_musculus
ENSAPEG00000009537	a1cf	100	73.977	MGP_PahariEiJ_G0014366	A1cf	100	73.159	Mus_pahari
ENSAPEG00000009537	a1cf	100	74.713	MGP_SPRETEiJ_G0023792	A1cf	100	74.056	Mus_spretus
ENSAPEG00000009537	a1cf	100	70.772	ENSMPUG00000016971	A1CF	100	69.787	Mustela_putorius_furo
ENSAPEG00000009537	a1cf	100	75.327	ENSMLUG00000016071	A1CF	100	75.123	Myotis_lucifugus
ENSAPEG00000009537	a1cf	100	75.286	ENSNGAG00000015136	A1cf	100	74.468	Nannospalax_galili
ENSAPEG00000009537	a1cf	100	85.691	ENSNBRG00000001712	a1cf	100	85.691	Neolamprologus_brichardi
ENSAPEG00000009537	a1cf	100	75.941	ENSNLEG00000012028	A1CF	100	75.286	Nomascus_leucogenys
ENSAPEG00000009537	a1cf	94	74.261	ENSMEUG00000015909	A1CF	100	73.391	Notamacropus_eugenii
ENSAPEG00000009537	a1cf	90	69.202	ENSOPRG00000010667	A1CF	97	68.140	Ochotona_princeps
ENSAPEG00000009537	a1cf	100	86.504	ENSONIG00000019105	a1cf	100	85.854	Oreochromis_niloticus
ENSAPEG00000009537	a1cf	80	76.091	ENSOANG00000007360	A1CF	99	75.052	Ornithorhynchus_anatinus
ENSAPEG00000009537	a1cf	100	74.183	ENSOCUG00000011587	A1CF	100	73.693	Oryctolagus_cuniculus
ENSAPEG00000009537	a1cf	100	86.190	ENSORLG00000013342	a1cf	100	84.526	Oryzias_latipes
ENSAPEG00000009537	a1cf	100	86.907	ENSORLG00020000586	a1cf	100	85.434	Oryzias_latipes_hni
ENSAPEG00000009537	a1cf	100	86.907	ENSORLG00015018569	a1cf	100	85.434	Oryzias_latipes_hsok
ENSAPEG00000009537	a1cf	100	84.829	ENSOMEG00000013531	a1cf	100	83.170	Oryzias_melastigma
ENSAPEG00000009537	a1cf	100	75.534	ENSOGAG00000012884	A1CF	100	75.698	Otolemur_garnettii
ENSAPEG00000009537	a1cf	100	76.105	ENSOARG00000013695	A1CF	100	75.286	Ovis_aries
ENSAPEG00000009537	a1cf	95	75.475	ENSPPAG00000028115	A1CF	99	79.528	Pan_paniscus
ENSAPEG00000009537	a1cf	100	74.713	ENSPPRG00000012180	A1CF	100	74.713	Panthera_pardus
ENSAPEG00000009537	a1cf	100	74.713	ENSPTIG00000021223	A1CF	100	74.713	Panthera_tigris_altaica
ENSAPEG00000009537	a1cf	100	75.738	ENSPTRG00000002508	A1CF	100	74.918	Pan_troglodytes
ENSAPEG00000009537	a1cf	100	74.877	ENSPANG00000021988	A1CF	100	74.056	Papio_anubis
ENSAPEG00000009537	a1cf	100	81.609	ENSPKIG00000025176	a1cf	100	80.296	Paramormyrops_kingsleyae
ENSAPEG00000009537	a1cf	100	74.713	ENSPSIG00000010318	A1CF	100	73.727	Pelodiscus_sinensis
ENSAPEG00000009537	a1cf	98	72.391	ENSPMGG00000013359	a1cf	99	72.819	Periophthalmus_magnuspinnatus
ENSAPEG00000009537	a1cf	100	75.286	ENSPEMG00000015021	A1cf	100	74.304	Peromyscus_maniculatus_bairdii
ENSAPEG00000009537	a1cf	100	73.563	ENSPCIG00000002175	A1CF	100	73.399	Phascolarctos_cinereus
ENSAPEG00000009537	a1cf	100	87.296	ENSPFOG00000006683	a1cf	100	87.459	Poecilia_formosa
ENSAPEG00000009537	a1cf	100	87.296	ENSPFOG00000007437	-	100	87.459	Poecilia_formosa
ENSAPEG00000009537	a1cf	100	85.831	ENSPLAG00000001210	-	100	86.156	Poecilia_latipinna
ENSAPEG00000009537	a1cf	100	85.831	ENSPLAG00000000026	a1cf	100	86.156	Poecilia_latipinna
ENSAPEG00000009537	a1cf	100	78.013	ENSPMEG00000015529	-	100	78.176	Poecilia_mexicana
ENSAPEG00000009537	a1cf	100	76.710	ENSPMEG00000000921	a1cf	100	76.873	Poecilia_mexicana
ENSAPEG00000009537	a1cf	100	87.296	ENSPREG00000016298	a1cf	100	87.459	Poecilia_reticulata
ENSAPEG00000009537	a1cf	100	74.795	ENSPPYG00000002819	A1CF	100	74.141	Pongo_abelii
ENSAPEG00000009537	a1cf	79	57.992	ENSPCAG00000006463	A1CF	62	65.714	Procavia_capensis
ENSAPEG00000009537	a1cf	100	74.837	ENSPCOG00000024172	A1CF	100	75.000	Propithecus_coquereli
ENSAPEG00000009537	a1cf	100	87.317	ENSPNYG00000017944	a1cf	100	87.317	Pundamilia_nyererei
ENSAPEG00000009537	a1cf	100	82.085	ENSPNAG00000007704	a1cf	100	80.945	Pygocentrus_nattereri
ENSAPEG00000009537	a1cf	100	73.813	ENSRNOG00000033195	A1cf	100	73.159	Rattus_norvegicus
ENSAPEG00000009537	a1cf	100	70.704	ENSRBIG00000042892	A1CF	100	71.756	Rhinopithecus_bieti
ENSAPEG00000009537	a1cf	100	76.026	ENSRROG00000041398	A1CF	100	75.205	Rhinopithecus_roxellana
ENSAPEG00000009537	a1cf	100	76.355	ENSSBOG00000021930	A1CF	100	75.534	Saimiri_boliviensis_boliviensis
ENSAPEG00000009537	a1cf	100	75.534	ENSSHAG00000005096	A1CF	100	74.548	Sarcophilus_harrisii
ENSAPEG00000009537	a1cf	100	81.270	ENSSFOG00015011774	a1cf	100	80.456	Scleropages_formosus
ENSAPEG00000009537	a1cf	100	85.714	ENSSMAG00000013271	a1cf	100	87.500	Scophthalmus_maximus
ENSAPEG00000009537	a1cf	100	89.638	ENSSDUG00000013930	a1cf	100	89.309	Seriola_dumerili
ENSAPEG00000009537	a1cf	100	80.428	ENSSLDG00000004290	a1cf	100	80.263	Seriola_lalandi_dorsalis
ENSAPEG00000009537	a1cf	95	67.069	ENSSARG00000005940	A1CF	95	66.724	Sorex_araneus
ENSAPEG00000009537	a1cf	95	75.958	ENSSPUG00000006797	A1CF	95	75.087	Sphenodon_punctatus
ENSAPEG00000009537	a1cf	100	76.268	ENSSSCG00000010431	A1CF	100	75.450	Sus_scrofa
ENSAPEG00000009537	a1cf	100	76.672	ENSTGUG00000005090	A1CF	100	76.020	Taeniopygia_guttata
ENSAPEG00000009537	a1cf	100	84.878	ENSTRUG00000001982	a1cf	100	83.252	Takifugu_rubripes
ENSAPEG00000009537	a1cf	100	85.227	ENSTNIG00000003580	a1cf	100	83.604	Tetraodon_nigroviridis
ENSAPEG00000009537	a1cf	95	70.690	ENSTTRG00000013190	A1CF	94	69.828	Tursiops_truncatus
ENSAPEG00000009537	a1cf	100	74.220	ENSUAMG00000020065	A1CF	100	73.563	Ursus_americanus
ENSAPEG00000009537	a1cf	100	75.041	ENSUMAG00000011162	A1CF	100	74.220	Ursus_maritimus
ENSAPEG00000009537	a1cf	87	71.455	ENSVPAG00000006130	A1CF	86	70.522	Vicugna_pacos
ENSAPEG00000009537	a1cf	100	74.507	ENSVVUG00000002504	A1CF	100	73.520	Vulpes_vulpes
ENSAPEG00000009537	a1cf	100	69.934	ENSXETG00000006611	a1cf	100	68.144	Xenopus_tropicalis
ENSAPEG00000009537	a1cf	100	87.296	ENSXCOG00000003302	a1cf	100	86.275	Xiphophorus_couchianus
ENSAPEG00000009537	a1cf	100	88.599	ENSXMAG00000016703	a1cf	100	87.582	Xiphophorus_maculatus