EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPEG00000009623 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Amphiprion_percula
Status
putative
Strand
Minus strand
Length
13045 bases
Position
chr22:25911955-25924999
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPEP00000013504RRM_1PF00076.222.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPET00000013862-2983-ENSAPEP00000013504232 (aa)-UPI000B8F12A7
Gene Model
Click here to download ENSAPEG00000009623's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000009623's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPEG00000009623pabpn16360.131ENSAPEG00000019534PABPN1L6557.459
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPEG00000009623pabpn19972.103ENSG00000258643BCL2L2-PABPN17072.103Homo_sapiens
ENSAPEG00000009623pabpn18682.039ENSG00000100836PABPN19481.548Homo_sapiens
ENSAPEG00000009623pabpn1100100.000ENSAPOG00000016425pabpn1100100.000Acanthochromis_polyacanthus
ENSAPEG00000009623pabpn18183.684ENSAMEG00000007048BCL2L2-PABPN110083.684Ailuropoda_melanoleuca
ENSAPEG00000009623pabpn19496.833ENSACIG00000021744pabpn110098.295Amphilophus_citrinellus
ENSAPEG00000009623pabpn1100100.000ENSAOCG00000015805pabpn1100100.000Amphiprion_ocellaris
ENSAPEG00000009623pabpn110099.569ENSATEG00000020531pabpn110099.569Anabas_testudineus
ENSAPEG00000009623pabpn18185.263ENSACAG00000006185-8172.500Anolis_carolinensis
ENSAPEG00000009623pabpn18483.333ENSANAG00000024513-8475.620Aotus_nancymaae
ENSAPEG00000009623pabpn19496.396ENSACLG00000016374pabpn17796.396Astatotilapia_calliptera
ENSAPEG00000009623pabpn110096.996ENSAMXG00000000452pabpn110096.996Astyanax_mexicanus
ENSAPEG00000009623pabpn18182.812ENSBTAG00000053753-7182.812Bos_taurus
ENSAPEG00000009623pabpn18476.531ENSBTAG00000050594-7475.481Bos_taurus
ENSAPEG00000009623pabpn18483.333ENSBTAG00000006884PABPN18669.318Bos_taurus
ENSAPEG00000009623pabpn16258.904WBGene00003904pabp-28453.409Caenorhabditis_elegans
ENSAPEG00000009623pabpn19975.536ENSCJAG00000007960-8475.966Callithrix_jacchus
ENSAPEG00000009623pabpn17179.762ENSCJAG00000004407-8479.762Callithrix_jacchus
ENSAPEG00000009623pabpn18682.039ENSCAFG00000011482PABPN18670.833Canis_familiaris
ENSAPEG00000009623pabpn18682.039ENSCAFG00020006651-8670.455Canis_lupus_dingo
ENSAPEG00000009623pabpn18682.039ENSCAFG00020007298-8670.455Canis_lupus_dingo
ENSAPEG00000009623pabpn18682.039ENSCHIG00000012184PABPN18670.455Capra_hircus
ENSAPEG00000009623pabpn19972.103ENSTSYG00000033996BCL2L2-PABPN19481.548Carlito_syrichta
ENSAPEG00000009623pabpn15981.295ENSCAPG00000009461-9283.721Cavia_aperea
ENSAPEG00000009623pabpn18681.553ENSCPOG00000025574PABPN16881.340Cavia_porcellus
ENSAPEG00000009623pabpn19975.536ENSCCAG00000033954BCL2L2-PABPN18475.966Cebus_capucinus
ENSAPEG00000009623pabpn19975.536ENSCATG00000038536BCL2L2-PABPN18475.966Cercocebus_atys
ENSAPEG00000009623pabpn16581.457ENSCLAG00000012423PABPN15681.457Chinchilla_lanigera
ENSAPEG00000009623pabpn18680.583ENSCSAG00000016036PABPN18669.318Chlorocebus_sabaeus
ENSAPEG00000009623pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSAPEG00000009623pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSAPEG00000009623pabpn19062.559ENSCING00000012468-8962.085Ciona_intestinalis
ENSAPEG00000009623pabpn17664.045ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSAPEG00000009623pabpn18571.212ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSAPEG00000009623pabpn19972.103ENSCANG00000009750BCL2L2-PABPN19481.548Colobus_angolensis_palliatus
ENSAPEG00000009623pabpn18681.553ENSCGRG00001019696Pabpn19480.952Cricetulus_griseus_chok1gshd
ENSAPEG00000009623pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSAPEG00000009623pabpn110097.414ENSCSEG00000008774pabpn110097.414Cynoglossus_semilaevis
ENSAPEG00000009623pabpn110094.017ENSCVAG00000003152pabpn110095.299Cyprinodon_variegatus
ENSAPEG00000009623pabpn110096.983ENSDARG00000045373pabpn110096.983Danio_rerio
ENSAPEG00000009623pabpn18153.476ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSAPEG00000009623pabpn18682.039ENSDNOG00000023682PABPN18670.455Dasypus_novemcinctus
ENSAPEG00000009623pabpn18681.068ENSDORG00000028966-8669.318Dipodomys_ordii
ENSAPEG00000009623pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSAPEG00000009623pabpn110057.983FBgn0005648Pabp29259.535Drosophila_melanogaster
ENSAPEG00000009623pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSAPEG00000009623pabpn18682.039ENSEASG00005011716PABPN18670.455Equus_asinus_asinus
ENSAPEG00000009623pabpn18581.373ENSECAG00000011652PABPN18170.661Equus_caballus
ENSAPEG00000009623pabpn18680.097ENSEEUG00000012973-7176.077Erinaceus_europaeus
ENSAPEG00000009623pabpn110094.515ENSELUG00000022654pabpn110094.515Esox_lucius
ENSAPEG00000009623pabpn18682.039ENSFCAG00000031922PABPN18670.455Felis_catus
ENSAPEG00000009623pabpn17181.548ENSFDAG00000018381BCL2L2-PABPN19481.548Fukomys_damarensis
ENSAPEG00000009623pabpn110095.259ENSFHEG00000007215pabpn110095.259Fundulus_heteroclitus
ENSAPEG00000009623pabpn19596.380ENSGMOG00000003922pabpn17896.380Gadus_morhua
ENSAPEG00000009623pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSAPEG00000009623pabpn110097.436ENSGAFG00000017099pabpn110097.436Gambusia_affinis
ENSAPEG00000009623pabpn19597.727ENSGACG00000002167pabpn110092.308Gasterosteus_aculeatus
ENSAPEG00000009623pabpn19975.536ENSGGOG00000022683-8475.966Gorilla_gorilla
ENSAPEG00000009623pabpn18969.231ENSGGOG00000039675-9165.417Gorilla_gorilla
ENSAPEG00000009623pabpn19465.812ENSGGOG00000025919-9868.456Gorilla_gorilla
ENSAPEG00000009623pabpn110098.707ENSHBUG00000019523pabpn110098.707Haplochromis_burtoni
ENSAPEG00000009623pabpn17164.072ENSHGLG00000009842-9364.072Heterocephalus_glaber_female
ENSAPEG00000009623pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSAPEG00000009623pabpn18681.553ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSAPEG00000009623pabpn17170.659ENSHGLG00100018935-9472.093Heterocephalus_glaber_male
ENSAPEG00000009623pabpn19471.041ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSAPEG00000009623pabpn18770.048ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSAPEG00000009623pabpn110097.414ENSHCOG00000004655pabpn110097.414Hippocampus_comes
ENSAPEG00000009623pabpn110089.224ENSIPUG00000000180-9989.224Ictalurus_punctatus
ENSAPEG00000009623pabpn110097.414ENSIPUG00000008085PABPN110097.414Ictalurus_punctatus
ENSAPEG00000009623pabpn17181.548ENSSTOG00000029847BCL2L2-PABPN19481.548Ictidomys_tridecemlineatus
ENSAPEG00000009623pabpn17181.548ENSJJAG00000023507Gm205219481.548Jaculus_jaculus
ENSAPEG00000009623pabpn110096.996ENSKMAG00000018748pabpn110096.996Kryptolebias_marmoratus
ENSAPEG00000009623pabpn110099.569ENSLBEG00000027266pabpn110099.569Labrus_bergylta
ENSAPEG00000009623pabpn17588.202ENSLACG00000000646pabpn18185.405Latimeria_chalumnae
ENSAPEG00000009623pabpn19065.888ENSLOCG00000004694pabpn1l9965.888Lepisosteus_oculatus
ENSAPEG00000009623pabpn19595.000ENSLOCG00000000796pabpn17794.811Lepisosteus_oculatus
ENSAPEG00000009623pabpn16582.119ENSLAFG00000031227-9982.119Loxodonta_africana
ENSAPEG00000009623pabpn16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSAPEG00000009623pabpn19972.103ENSMFAG00000032183BCL2L2-PABPN19481.548Macaca_fascicularis
ENSAPEG00000009623pabpn18668.293ENSMMUG00000048382-8958.364Macaca_mulatta
ENSAPEG00000009623pabpn19972.103ENSMMUG00000014747BCL2L2-PABPN110081.633Macaca_mulatta
ENSAPEG00000009623pabpn19975.536ENSMNEG00000045065BCL2L2-PABPN18475.966Macaca_nemestrina
ENSAPEG00000009623pabpn17968.984ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSAPEG00000009623pabpn19972.103ENSMLEG00000043862BCL2L2-PABPN19481.548Mandrillus_leucophaeus
ENSAPEG00000009623pabpn17266.467ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSAPEG00000009623pabpn19998.253ENSMAMG00000007979pabpn17998.253Mastacembelus_armatus
ENSAPEG00000009623pabpn19598.636ENSMZEG00005011904pabpn17798.636Maylandia_zebra
ENSAPEG00000009623pabpn19972.103ENSMAUG00000007383Gm205218770.229Mesocricetus_auratus
ENSAPEG00000009623pabpn19975.966ENSMICG00000010002BCL2L2-PABPN18476.695Microcebus_murinus
ENSAPEG00000009623pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSAPEG00000009623pabpn110099.138ENSMMOG00000005405pabpn110099.138Mola_mola
ENSAPEG00000009623pabpn18578.713ENSMODG00000004535-7970.248Monodelphis_domestica
ENSAPEG00000009623pabpn19998.690ENSMALG00000019612pabpn17898.690Monopterus_albus
ENSAPEG00000009623pabpn18680.583MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSAPEG00000009623pabpn19971.245MGP_CAROLIEiJ_G0019276Gm205217071.245Mus_caroli
ENSAPEG00000009623pabpn19971.674ENSMUSG00000092232Gm205217071.674Mus_musculus
ENSAPEG00000009623pabpn18681.068ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSAPEG00000009623pabpn18681.068MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSAPEG00000009623pabpn19971.674MGP_PahariEiJ_G0030294Gm205217071.674Mus_pahari
ENSAPEG00000009623pabpn18681.068MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSAPEG00000009623pabpn19971.674MGP_SPRETEiJ_G0020165Gm205217071.674Mus_spretus
ENSAPEG00000009623pabpn16681.410ENSMPUG00000006775-8783.562Mustela_putorius_furo
ENSAPEG00000009623pabpn18480.808ENSMLUG00000028677-8572.881Myotis_lucifugus
ENSAPEG00000009623pabpn18182.632ENSMLUG00000003800-10082.632Myotis_lucifugus
ENSAPEG00000009623pabpn18879.048ENSMLUG00000012452-8270.635Myotis_lucifugus
ENSAPEG00000009623pabpn19972.532ENSNGAG00000019529Gm205217072.532Nannospalax_galili
ENSAPEG00000009623pabpn19598.636ENSNBRG00000023955pabpn110098.295Neolamprologus_brichardi
ENSAPEG00000009623pabpn19972.103ENSNLEG00000015007-7481.818Nomascus_leucogenys
ENSAPEG00000009623pabpn18669.268ENSNLEG00000030598-7767.308Nomascus_leucogenys
ENSAPEG00000009623pabpn16460.135ENSNLEG00000035292-9960.135Nomascus_leucogenys
ENSAPEG00000009623pabpn17672.067ENSODEG00000011555-8970.833Octodon_degus
ENSAPEG00000009623pabpn18674.384ENSODEG00000003739-8862.646Octodon_degus
ENSAPEG00000009623pabpn19971.674ENSODEG00000002083BCL2L2-PABPN16881.340Octodon_degus
ENSAPEG00000009623pabpn19598.636ENSONIG00000008112pabpn17798.636Oreochromis_niloticus
ENSAPEG00000009623pabpn16383.673ENSOANG00000009218-10083.673Ornithorhynchus_anatinus
ENSAPEG00000009623pabpn18681.553ENSOCUG00000016174PABPN19570.229Oryctolagus_cuniculus
ENSAPEG00000009623pabpn19997.817ENSORLG00000027900pabpn19098.113Oryzias_latipes
ENSAPEG00000009623pabpn19997.817ENSORLG00020004681pabpn17897.817Oryzias_latipes_hni
ENSAPEG00000009623pabpn110098.276ENSORLG00015000018pabpn110098.276Oryzias_latipes_hsok
ENSAPEG00000009623pabpn19598.636ENSOMEG00000016618pabpn18298.630Oryzias_melastigma
ENSAPEG00000009623pabpn18682.039ENSOGAG00000008710PABPN18670.455Otolemur_garnettii
ENSAPEG00000009623pabpn19972.103ENSOARG00000019336BCL2L2-PABPN16472.103Ovis_aries
ENSAPEG00000009623pabpn19972.103ENSPPAG00000028984BCL2L2-PABPN18783.562Pan_paniscus
ENSAPEG00000009623pabpn17166.867ENSPPAG00000039421-9366.867Pan_paniscus
ENSAPEG00000009623pabpn18682.039ENSPPRG00000010567PABPN18670.455Panthera_pardus
ENSAPEG00000009623pabpn17181.548ENSPTIG00000001063BCL2L2-PABPN19481.548Panthera_tigris_altaica
ENSAPEG00000009623pabpn19975.536ENSPTRG00000006167BCL2L28475.966Pan_troglodytes
ENSAPEG00000009623pabpn110062.821ENSPTRG00000047273-9360.317Pan_troglodytes
ENSAPEG00000009623pabpn19975.536ENSPANG00000021100BCL2L2-PABPN18475.966Papio_anubis
ENSAPEG00000009623pabpn18469.697ENSPANG00000023326-9975.352Papio_anubis
ENSAPEG00000009623pabpn19994.760ENSPKIG00000008144-7894.760Paramormyrops_kingsleyae
ENSAPEG00000009623pabpn110091.845ENSPKIG00000018052pabpn110095.279Paramormyrops_kingsleyae
ENSAPEG00000009623pabpn17169.512ENSPKIG00000008340pabpn1l8468.023Paramormyrops_kingsleyae
ENSAPEG00000009623pabpn15084.348ENSPSIG00000011959-8484.348Pelodiscus_sinensis
ENSAPEG00000009623pabpn19598.182ENSPMGG00000022027pabpn18198.182Periophthalmus_magnuspinnatus
ENSAPEG00000009623pabpn19972.103ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSAPEG00000009623pabpn17975.806ENSPMAG00000006212pabpn19965.041Petromyzon_marinus
ENSAPEG00000009623pabpn18679.512ENSPCIG00000027751-8670.076Phascolarctos_cinereus
ENSAPEG00000009623pabpn110097.009ENSPFOG00000010351pabpn19997.009Poecilia_formosa
ENSAPEG00000009623pabpn19996.537ENSPLAG00000022696pabpn17996.537Poecilia_latipinna
ENSAPEG00000009623pabpn110097.009ENSPMEG00000020856pabpn110097.009Poecilia_mexicana
ENSAPEG00000009623pabpn110097.436ENSPREG00000011278pabpn110097.436Poecilia_reticulata
ENSAPEG00000009623pabpn18181.959ENSPPYG00000005663PABPN18670.661Pongo_abelii
ENSAPEG00000009623pabpn17968.750ENSPCAG00000005902PABPN18259.426Procavia_capensis
ENSAPEG00000009623pabpn19975.966ENSPCOG00000028047BCL2L2-PABPN18476.695Propithecus_coquereli
ENSAPEG00000009623pabpn18880.383ENSPVAG00000005270PABPN18669.202Pteropus_vampyrus
ENSAPEG00000009623pabpn110098.707ENSPNYG00000013182pabpn110098.707Pundamilia_nyererei
ENSAPEG00000009623pabpn18862.319ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSAPEG00000009623pabpn110097.845ENSPNAG00000023526pabpn110097.845Pygocentrus_nattereri
ENSAPEG00000009623pabpn18681.553ENSRNOG00000042195Pabpn18570.229Rattus_norvegicus
ENSAPEG00000009623pabpn18870.813ENSRBIG00000042811-9566.960Rhinopithecus_bieti
ENSAPEG00000009623pabpn19471.493ENSRBIG00000040762BCL2L2-PABPN16572.512Rhinopithecus_bieti
ENSAPEG00000009623pabpn18971.698ENSRBIG00000039547-8266.518Rhinopithecus_bieti
ENSAPEG00000009623pabpn18867.299ENSRROG00000036409-7064.192Rhinopithecus_roxellana
ENSAPEG00000009623pabpn19471.493ENSRROG00000045535BCL2L2-PABPN19481.548Rhinopithecus_roxellana
ENSAPEG00000009623pabpn19466.964ENSRROG00000040409-8266.964Rhinopithecus_roxellana
ENSAPEG00000009623pabpn19968.293ENSSBOG00000026930BCL2L2-PABPN18783.562Saimiri_boliviensis_boliviensis
ENSAPEG00000009623pabpn18180.952ENSSHAG00000014841-8783.158Sarcophilus_harrisii
ENSAPEG00000009623pabpn19962.185ENSSHAG00000007707-9958.824Sarcophilus_harrisii
ENSAPEG00000009623pabpn18064.516ENSSFOG00015015833pabpn1l7768.862Scleropages_formosus
ENSAPEG00000009623pabpn110096.552ENSSFOG00015014718pabpn110096.552Scleropages_formosus
ENSAPEG00000009623pabpn110090.129ENSSFOG00015012565pabpn110090.129Scleropages_formosus
ENSAPEG00000009623pabpn110099.138ENSSMAG00000020157pabpn110099.138Scophthalmus_maximus
ENSAPEG00000009623pabpn19999.127ENSSDUG00000020582pabpn17899.127Seriola_dumerili
ENSAPEG00000009623pabpn110099.569ENSSLDG00000007118pabpn110099.569Seriola_lalandi_dorsalis
ENSAPEG00000009623pabpn17183.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSAPEG00000009623pabpn110098.712ENSSPAG00000021658pabpn110098.712Stegastes_partitus
ENSAPEG00000009623pabpn19972.103ENSSSCG00000002023PABPN18670.455Sus_scrofa
ENSAPEG00000009623pabpn19262.500ENSSSCG00000034805-7958.571Sus_scrofa
ENSAPEG00000009623pabpn110097.845ENSTRUG00000023664pabpn110097.845Takifugu_rubripes
ENSAPEG00000009623pabpn19293.023ENSTNIG00000005369pabpn19097.423Tetraodon_nigroviridis
ENSAPEG00000009623pabpn18682.039ENSUAMG00000024460PABPN16881.818Ursus_americanus
ENSAPEG00000009623pabpn19972.103ENSUMAG00000014288BCL2L2-PABPN17072.103Ursus_maritimus
ENSAPEG00000009623pabpn19972.103ENSVVUG00000019912BCL2L2-PABPN17682.474Vulpes_vulpes
ENSAPEG00000009623pabpn18485.714ENSXETG00000014597pabpn17382.407Xenopus_tropicalis
ENSAPEG00000009623pabpn17585.714ENSXCOG00000005158pabpn19885.714Xiphophorus_couchianus
ENSAPEG00000009623pabpn110097.863ENSXMAG00000006196pabpn110097.863Xiphophorus_maculatus

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