EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000009915 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Plus strand
Length: 4794 bases
Position: chr9:4203806-4208599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000013943	RRM_1	PF00076.22	2.5e-32	1	2
ENSAPEP00000013943	RRM_1	PF00076.22	2.5e-32	2	2
ENSAPEP00000013913	RRM_1	PF00076.22	3e-32	1	2
ENSAPEP00000013913	RRM_1	PF00076.22	3e-32	2	2
ENSAPEP00000013921	RRM_1	PF00076.22	3e-32	1	2
ENSAPEP00000013921	RRM_1	PF00076.22	3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000014284	-	2284	-	ENSAPEP00000013921	245 (aa)	-	UPI0002A47EAD
ENSAPET00000014276	-	2737	-	ENSAPEP00000013913	245 (aa)	-	UPI0002A47EAD
ENSAPET00000014308	-	696	-	ENSAPEP00000013943	231 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000009915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000009915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000009915	-	78	40.722	ENSAPEG00000020746	-	59	40.230
ENSAPEG00000009915	-	83	88.442	ENSAPEG00000023352	-	79	88.442
ENSAPEG00000009915	-	71	39.773	ENSAPEG00000009297	srsf5a	58	41.477
ENSAPEG00000009915	-	77	71.910	ENSAPEG00000011908	srsf9	73	70.787
ENSAPEG00000009915	-	68	43.094	ENSAPEG00000007830	srsf5b	58	46.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000009915	-	98	85.185	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSAPEG00000009915	-	100	99.592	ENSAPOG00000002748	-	100	99.592	Acanthochromis_polyacanthus
ENSAPEG00000009915	-	83	89.005	ENSAPOG00000008542	-	80	88.442	Acanthochromis_polyacanthus
ENSAPEG00000009915	-	83	89.005	ENSAMEG00000002635	SRSF1	77	89.529	Ailuropoda_melanoleuca
ENSAPEG00000009915	-	100	99.567	ENSACIG00000008091	srsf1a	100	99.567	Amphilophus_citrinellus
ENSAPEG00000009915	-	100	100.000	ENSAOCG00000010671	-	100	100.000	Amphiprion_ocellaris
ENSAPEG00000009915	-	83	88.442	ENSAOCG00000000337	-	80	88.442	Amphiprion_ocellaris
ENSAPEG00000009915	-	100	99.190	ENSATEG00000022403	-	100	99.190	Anabas_testudineus
ENSAPEG00000009915	-	86	86.869	ENSATEG00000021567	-	92	83.784	Anabas_testudineus
ENSAPEG00000009915	-	83	89.119	ENSACAG00000005542	-	78	91.192	Anolis_carolinensis
ENSAPEG00000009915	-	84	67.526	ENSANAG00000025417	-	73	68.063	Aotus_nancymaae
ENSAPEG00000009915	-	98	85.185	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSAPEG00000009915	-	95	80.753	ENSAMXG00000035996	srsf1a	79	88.889	Astyanax_mexicanus
ENSAPEG00000009915	-	57	73.548	ENSAMXG00000024373	-	72	77.419	Astyanax_mexicanus
ENSAPEG00000009915	-	98	85.185	ENSBTAG00000014766	SRSF1	88	86.547	Bos_taurus
ENSAPEG00000009915	-	98	85.185	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSAPEG00000009915	-	83	82.902	ENSCJAG00000008111	-	86	83.938	Callithrix_jacchus
ENSAPEG00000009915	-	98	85.185	ENSCAFG00000017430	SRSF1	88	86.547	Canis_familiaris
ENSAPEG00000009915	-	98	85.185	ENSCAFG00020025632	-	88	86.547	Canis_lupus_dingo
ENSAPEG00000009915	-	83	90.155	ENSCHIG00000010787	SRSF1	78	92.228	Capra_hircus
ENSAPEG00000009915	-	98	85.185	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSAPEG00000009915	-	98	85.185	ENSCPOG00000032681	-	88	86.547	Cavia_porcellus
ENSAPEG00000009915	-	98	85.185	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSAPEG00000009915	-	98	85.185	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSAPEG00000009915	-	98	85.185	ENSCLAG00000014707	-	88	86.547	Chinchilla_lanigera
ENSAPEG00000009915	-	98	84.362	ENSCSAG00000005642	-	88	85.650	Chlorocebus_sabaeus
ENSAPEG00000009915	-	83	90.155	ENSCHOG00000001899	SRSF1	78	92.228	Choloepus_hoffmanni
ENSAPEG00000009915	-	98	84.774	ENSCPBG00000009851	-	88	86.099	Chrysemys_picta_bellii
ENSAPEG00000009915	-	98	85.185	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSAPEG00000009915	-	98	85.185	ENSCGRG00001000670	Srsf1	88	86.547	Cricetulus_griseus_chok1gshd
ENSAPEG00000009915	-	98	85.185	ENSCGRG00000005590	Srsf1	88	86.547	Cricetulus_griseus_crigri
ENSAPEG00000009915	-	100	91.020	ENSCSEG00000014272	-	99	91.020	Cynoglossus_semilaevis
ENSAPEG00000009915	-	82	82.212	ENSCSEG00000009973	-	79	82.212	Cynoglossus_semilaevis
ENSAPEG00000009915	-	82	87.113	ENSCVAG00000005458	-	90	86.813	Cyprinodon_variegatus
ENSAPEG00000009915	-	100	99.592	ENSCVAG00000018617	-	100	99.592	Cyprinodon_variegatus
ENSAPEG00000009915	-	83	84.729	ENSDARG00000057691	srsf1a	99	85.864	Danio_rerio
ENSAPEG00000009915	-	83	90.155	ENSDARG00000017843	srsf1b	79	92.228	Danio_rerio
ENSAPEG00000009915	-	98	85.185	ENSDNOG00000011737	-	88	86.547	Dasypus_novemcinctus
ENSAPEG00000009915	-	98	85.185	ENSDORG00000015082	Srsf1	88	86.547	Dipodomys_ordii
ENSAPEG00000009915	-	77	90.000	ENSETEG00000005349	-	62	91.111	Echinops_telfairi
ENSAPEG00000009915	-	98	85.185	ENSEASG00005002922	-	88	86.547	Equus_asinus_asinus
ENSAPEG00000009915	-	83	90.155	ENSECAG00000016654	SRSF1	78	92.228	Equus_caballus
ENSAPEG00000009915	-	77	91.111	ENSEEUG00000009255	-	62	92.222	Erinaceus_europaeus
ENSAPEG00000009915	-	83	93.229	ENSELUG00000021646	srsf1a	76	93.750	Esox_lucius
ENSAPEG00000009915	-	98	85.185	ENSFCAG00000002250	-	90	91.713	Felis_catus
ENSAPEG00000009915	-	78	94.340	ENSFALG00000005062	-	93	66.949	Ficedula_albicollis
ENSAPEG00000009915	-	98	85.185	ENSFDAG00000010646	-	88	86.547	Fukomys_damarensis
ENSAPEG00000009915	-	100	99.184	ENSFHEG00000003174	srsf1a	100	99.184	Fundulus_heteroclitus
ENSAPEG00000009915	-	85	89.286	ENSGMOG00000014787	-	80	88.482	Gadus_morhua
ENSAPEG00000009915	-	83	89.637	ENSGALG00000005525	SRSF1	78	91.710	Gallus_gallus
ENSAPEG00000009915	-	83	86.387	ENSGACG00000020621	srsf1b	78	85.864	Gasterosteus_aculeatus
ENSAPEG00000009915	-	98	84.774	ENSGAGG00000022965	-	88	86.099	Gopherus_agassizii
ENSAPEG00000009915	-	98	85.185	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSAPEG00000009915	-	100	99.592	ENSHBUG00000016788	srsf1a	100	99.592	Haplochromis_burtoni
ENSAPEG00000009915	-	70	89.634	ENSHGLG00000000600	-	76	92.073	Heterocephalus_glaber_female
ENSAPEG00000009915	-	70	89.634	ENSHGLG00000000669	-	76	92.073	Heterocephalus_glaber_female
ENSAPEG00000009915	-	98	85.185	ENSHGLG00100016906	-	88	86.547	Heterocephalus_glaber_male
ENSAPEG00000009915	-	84	90.452	ENSHCOG00000018918	srsf1a	88	86.607	Hippocampus_comes
ENSAPEG00000009915	-	83	89.583	ENSIPUG00000008750	srsf1b	78	92.188	Ictalurus_punctatus
ENSAPEG00000009915	-	84	86.567	ENSIPUG00000017039	srsf1a	80	88.557	Ictalurus_punctatus
ENSAPEG00000009915	-	98	85.185	ENSSTOG00000000243	-	91	91.713	Ictidomys_tridecemlineatus
ENSAPEG00000009915	-	98	85.185	ENSJJAG00000000102	-	88	86.547	Jaculus_jaculus
ENSAPEG00000009915	-	52	81.967	ENSJJAG00000014464	-	92	85.366	Jaculus_jaculus
ENSAPEG00000009915	-	100	98.374	ENSKMAG00000019232	srsf1a	100	98.374	Kryptolebias_marmoratus
ENSAPEG00000009915	-	100	99.184	ENSLBEG00000020864	-	100	99.184	Labrus_bergylta
ENSAPEG00000009915	-	83	80.102	ENSLBEG00000015294	-	79	81.633	Labrus_bergylta
ENSAPEG00000009915	-	83	90.104	ENSLACG00000014160	srsf1a	72	90.104	Latimeria_chalumnae
ENSAPEG00000009915	-	83	89.062	ENSLOCG00000005994	srsf1a	78	92.188	Lepisosteus_oculatus
ENSAPEG00000009915	-	83	90.155	ENSLAFG00000025743	SRSF1	78	92.228	Loxodonta_africana
ENSAPEG00000009915	-	98	85.185	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSAPEG00000009915	-	99	81.967	ENSMMUG00000003260	-	93	89.583	Macaca_mulatta
ENSAPEG00000009915	-	98	85.185	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSAPEG00000009915	-	99	82.377	ENSMNEG00000015983	-	88	84.305	Macaca_nemestrina
ENSAPEG00000009915	-	98	85.185	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSAPEG00000009915	-	83	90.155	ENSMLEG00000040509	SRSF1	78	92.228	Mandrillus_leucophaeus
ENSAPEG00000009915	-	99	82.645	ENSMLEG00000015243	-	88	82.353	Mandrillus_leucophaeus
ENSAPEG00000009915	-	83	92.188	ENSMAMG00000019691	-	80	91.667	Mastacembelus_armatus
ENSAPEG00000009915	-	100	100.000	ENSMAMG00000018454	-	100	100.000	Mastacembelus_armatus
ENSAPEG00000009915	-	83	90.052	ENSMAMG00000019687	-	91	85.650	Mastacembelus_armatus
ENSAPEG00000009915	-	98	85.185	ENSMAUG00000021845	Srsf1	88	86.547	Mesocricetus_auratus
ENSAPEG00000009915	-	98	85.185	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSAPEG00000009915	-	98	85.185	ENSMOCG00000001996	Srsf1	88	86.547	Microtus_ochrogaster
ENSAPEG00000009915	-	100	98.701	ENSMMOG00000014354	srsf1a	100	98.701	Mola_mola
ENSAPEG00000009915	-	77	90.608	ENSMODG00000014781	-	62	91.160	Monodelphis_domestica
ENSAPEG00000009915	-	88	96.744	ENSMALG00000017129	-	84	96.744	Monopterus_albus
ENSAPEG00000009915	-	86	78.283	ENSMALG00000007763	-	77	82.199	Monopterus_albus
ENSAPEG00000009915	-	98	85.185	MGP_CAROLIEiJ_G0016943	Srsf1	90	91.713	Mus_caroli
ENSAPEG00000009915	-	98	85.185	ENSMUSG00000018379	Srsf1	90	91.713	Mus_musculus
ENSAPEG00000009915	-	98	85.185	MGP_PahariEiJ_G0018074	Srsf1	88	86.547	Mus_pahari
ENSAPEG00000009915	-	98	85.185	MGP_SPRETEiJ_G0017790	Srsf1	90	91.713	Mus_spretus
ENSAPEG00000009915	-	83	90.155	ENSMPUG00000015369	SRSF1	78	92.228	Mustela_putorius_furo
ENSAPEG00000009915	-	85	87.817	ENSMLUG00000023995	-	77	87.435	Myotis_lucifugus
ENSAPEG00000009915	-	83	90.155	ENSMLUG00000011040	SRSF1	78	92.228	Myotis_lucifugus
ENSAPEG00000009915	-	83	90.155	ENSNGAG00000011395	Srsf1	78	92.228	Nannospalax_galili
ENSAPEG00000009915	-	99	74.590	ENSNBRG00000008041	srsf1b	78	77.487	Neolamprologus_brichardi
ENSAPEG00000009915	-	98	85.185	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSAPEG00000009915	-	52	86.992	ENSMEUG00000002783	-	98	87.097	Notamacropus_eugenii
ENSAPEG00000009915	-	56	88.636	ENSOPRG00000001234	-	72	91.667	Ochotona_princeps
ENSAPEG00000009915	-	98	85.185	ENSODEG00000011481	-	88	86.547	Octodon_degus
ENSAPEG00000009915	-	100	99.592	ENSONIG00000013160	-	99	99.592	Oreochromis_niloticus
ENSAPEG00000009915	-	84	91.282	ENSONIG00000004860	-	79	90.625	Oreochromis_niloticus
ENSAPEG00000009915	-	99	63.821	ENSOCUG00000010894	-	75	72.487	Oryctolagus_cuniculus
ENSAPEG00000009915	-	100	100.000	ENSORLG00000004580	srsf1a	100	100.000	Oryzias_latipes
ENSAPEG00000009915	-	100	100.000	ENSORLG00020009456	srsf1a	100	100.000	Oryzias_latipes_hni
ENSAPEG00000009915	-	100	100.000	ENSORLG00015014384	srsf1a	100	100.000	Oryzias_latipes_hsok
ENSAPEG00000009915	-	92	98.230	ENSOMEG00000004106	srsf1a	93	98.230	Oryzias_melastigma
ENSAPEG00000009915	-	87	90.686	ENSOGAG00000025950	-	78	92.228	Otolemur_garnettii
ENSAPEG00000009915	-	83	89.005	ENSOARG00000008323	SRSF1	77	89.005	Ovis_aries
ENSAPEG00000009915	-	98	85.185	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSAPEG00000009915	-	98	85.185	ENSPPRG00000004238	-	90	91.713	Panthera_pardus
ENSAPEG00000009915	-	98	85.185	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSAPEG00000009915	-	98	85.185	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSAPEG00000009915	-	99	67.755	ENSPANG00000030275	-	89	64.889	Papio_anubis
ENSAPEG00000009915	-	83	91.146	ENSPKIG00000007204	srsf1a	83	91.146	Paramormyrops_kingsleyae
ENSAPEG00000009915	-	83	89.062	ENSPKIG00000012857	srsf1b	78	92.188	Paramormyrops_kingsleyae
ENSAPEG00000009915	-	83	82.383	ENSPSIG00000009000	-	72	90.977	Pelodiscus_sinensis
ENSAPEG00000009915	-	100	97.222	ENSPMGG00000013112	-	100	97.222	Periophthalmus_magnuspinnatus
ENSAPEG00000009915	-	96	83.051	ENSPMGG00000005467	-	97	77.731	Periophthalmus_magnuspinnatus
ENSAPEG00000009915	-	98	85.185	ENSPEMG00000021416	Srsf1	88	86.547	Peromyscus_maniculatus_bairdii
ENSAPEG00000009915	-	83	90.206	ENSPCIG00000006076	-	78	92.268	Phascolarctos_cinereus
ENSAPEG00000009915	-	84	87.310	ENSPFOG00000018325	-	69	87.565	Poecilia_formosa
ENSAPEG00000009915	-	84	87.310	ENSPLAG00000008416	srsf1b	78	87.565	Poecilia_latipinna
ENSAPEG00000009915	-	84	87.310	ENSPMEG00000002388	-	78	87.565	Poecilia_mexicana
ENSAPEG00000009915	-	53	99.187	ENSPMEG00000014312	-	99	99.187	Poecilia_mexicana
ENSAPEG00000009915	-	53	99.187	ENSPMEG00000020607	-	99	99.187	Poecilia_mexicana
ENSAPEG00000009915	-	100	99.592	ENSPREG00000009667	srsf1a	100	99.592	Poecilia_reticulata
ENSAPEG00000009915	-	98	85.185	ENSPPYG00000008240	SRSF1	88	86.547	Pongo_abelii
ENSAPEG00000009915	-	83	90.155	ENSPCAG00000005199	SRSF1	78	92.228	Procavia_capensis
ENSAPEG00000009915	-	98	85.185	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSAPEG00000009915	-	84	72.222	ENSPCOG00000025736	-	93	72.775	Propithecus_coquereli
ENSAPEG00000009915	-	57	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSAPEG00000009915	-	83	91.623	ENSPNAG00000014601	srsf1b	78	91.623	Pygocentrus_nattereri
ENSAPEG00000009915	-	95	84.052	ENSPNAG00000022241	srsf1a	78	91.099	Pygocentrus_nattereri
ENSAPEG00000009915	-	83	90.155	ENSRNOG00000050323	Srsf1	78	92.228	Rattus_norvegicus
ENSAPEG00000009915	-	98	85.185	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSAPEG00000009915	-	98	85.185	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSAPEG00000009915	-	98	85.185	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSAPEG00000009915	-	83	90.206	ENSSHAG00000002552	-	78	92.268	Sarcophilus_harrisii
ENSAPEG00000009915	-	83	92.147	ENSSFOG00015004800	srsf1a	77	92.147	Scleropages_formosus
ENSAPEG00000009915	-	100	97.959	ENSSMAG00000007018	-	100	97.959	Scophthalmus_maximus
ENSAPEG00000009915	-	83	85.000	ENSSMAG00000009719	-	78	85.000	Scophthalmus_maximus
ENSAPEG00000009915	-	100	99.184	ENSSDUG00000011303	-	100	99.184	Seriola_dumerili
ENSAPEG00000009915	-	99	75.641	ENSSDUG00000003929	-	83	79.798	Seriola_dumerili
ENSAPEG00000009915	-	100	99.184	ENSSLDG00000010543	-	100	99.184	Seriola_lalandi_dorsalis
ENSAPEG00000009915	-	98	70.614	ENSSLDG00000016895	-	77	83.696	Seriola_lalandi_dorsalis
ENSAPEG00000009915	-	83	79.167	ENSSLDG00000016868	-	89	76.126	Seriola_lalandi_dorsalis
ENSAPEG00000009915	-	77	91.111	ENSSARG00000010949	-	62	92.222	Sorex_araneus
ENSAPEG00000009915	-	98	84.774	ENSSPUG00000000804	-	91	91.160	Sphenodon_punctatus
ENSAPEG00000009915	-	100	99.593	ENSSPAG00000022562	-	100	99.593	Stegastes_partitus
ENSAPEG00000009915	-	83	84.951	ENSSPAG00000014152	-	80	84.951	Stegastes_partitus
ENSAPEG00000009915	-	98	85.185	ENSSSCG00000017626	-	88	86.547	Sus_scrofa
ENSAPEG00000009915	-	57	87.970	ENSTGUG00000008416	-	72	90.977	Taeniopygia_guttata
ENSAPEG00000009915	-	100	99.184	ENSTRUG00000003691	srsf1a	100	99.184	Takifugu_rubripes
ENSAPEG00000009915	-	100	99.184	ENSTNIG00000016223	srsf1a	99	99.184	Tetraodon_nigroviridis
ENSAPEG00000009915	-	77	88.333	ENSTBEG00000015378	-	62	91.111	Tupaia_belangeri
ENSAPEG00000009915	-	56	88.636	ENSTTRG00000007310	SRSF1	72	91.667	Tursiops_truncatus
ENSAPEG00000009915	-	83	90.155	ENSUAMG00000009858	SRSF1	78	92.228	Ursus_americanus
ENSAPEG00000009915	-	98	85.185	ENSUMAG00000000455	-	88	86.547	Ursus_maritimus
ENSAPEG00000009915	-	83	89.637	ENSVPAG00000010094	SRSF1	78	91.710	Vicugna_pacos
ENSAPEG00000009915	-	98	85.185	ENSVVUG00000011882	-	88	86.547	Vulpes_vulpes
ENSAPEG00000009915	-	83	92.147	ENSXETG00000008954	srsf1	79	84.434	Xenopus_tropicalis
ENSAPEG00000009915	-	100	99.592	ENSXMAG00000011766	srsf1a	100	99.592	Xiphophorus_maculatus