EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000010478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 4756 bases
Position: chr14:3865401-3870156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	1	7
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	2	7
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	3	7
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	4	7
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	5	7
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	6	7
ENSAPEP00000014689	zf-C2H2	PF00096.26	7.3e-32	7	7
ENSAPEP00000014689	zf-met	PF12874.7	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015076	-	4524	-	ENSAPEP00000014689	454 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000010478	-	52	40.000	ENSAPEG00000001596	-	73	40.777
ENSAPEG00000010478	-	51	41.593	ENSAPEG00000013044	-	70	40.000
ENSAPEG00000010478	-	51	40.796	ENSAPEG00000012243	-	91	39.524
ENSAPEG00000010478	-	93	48.175	ENSAPEG00000015310	-	98	48.175
ENSAPEG00000010478	-	78	35.780	ENSAPEG00000009515	-	97	45.679
ENSAPEG00000010478	-	71	44.037	ENSAPEG00000008020	-	97	50.820
ENSAPEG00000010478	-	57	38.983	ENSAPEG00000013333	-	66	38.983
ENSAPEG00000010478	-	70	31.722	ENSAPEG00000005592	-	64	35.583
ENSAPEG00000010478	-	51	42.857	ENSAPEG00000019527	-	61	42.857
ENSAPEG00000010478	-	76	44.103	ENSAPEG00000004486	-	94	48.571
ENSAPEG00000010478	-	76	44.845	ENSAPEG00000005462	-	90	46.243
ENSAPEG00000010478	-	52	45.926	ENSAPEG00000001546	-	75	45.926
ENSAPEG00000010478	-	94	43.284	ENSAPEG00000020501	-	97	43.284
ENSAPEG00000010478	-	52	33.005	ENSAPEG00000016846	prdm5	72	33.005
ENSAPEG00000010478	-	66	42.202	ENSAPEG00000002585	-	92	42.202
ENSAPEG00000010478	-	73	34.118	ENSAPEG00000017116	-	82	44.138
ENSAPEG00000010478	-	70	44.495	ENSAPEG00000011020	-	95	53.086
ENSAPEG00000010478	-	64	40.708	ENSAPEG00000002888	-	88	40.708
ENSAPEG00000010478	-	62	38.571	ENSAPEG00000006979	-	60	38.571
ENSAPEG00000010478	-	66	36.364	ENSAPEG00000006358	znf341	57	32.867
ENSAPEG00000010478	-	53	41.667	ENSAPEG00000012217	-	67	41.743
ENSAPEG00000010478	-	52	42.353	ENSAPEG00000002661	-	88	42.353
ENSAPEG00000010478	-	94	32.468	ENSAPEG00000018316	-	87	32.468
ENSAPEG00000010478	-	51	34.259	ENSAPEG00000000869	scrt1b	61	34.259
ENSAPEG00000010478	-	71	45.455	ENSAPEG00000019026	znf236	60	45.455
ENSAPEG00000010478	-	94	49.593	ENSAPEG00000016118	-	99	47.414
ENSAPEG00000010478	-	58	46.847	ENSAPEG00000009997	-	67	39.749
ENSAPEG00000010478	-	51	33.197	ENSAPEG00000018919	znf407	58	33.197
ENSAPEG00000010478	-	71	34.024	ENSAPEG00000003892	-	74	51.095
ENSAPEG00000010478	-	93	42.963	ENSAPEG00000003893	-	96	42.336
ENSAPEG00000010478	-	69	37.778	ENSAPEG00000018796	-	91	37.778
ENSAPEG00000010478	-	58	47.273	ENSAPEG00000014415	-	85	47.273
ENSAPEG00000010478	-	68	40.092	ENSAPEG00000002558	-	81	40.092
ENSAPEG00000010478	-	77	46.040	ENSAPEG00000013031	-	92	46.040
ENSAPEG00000010478	-	80	51.020	ENSAPEG00000007673	bcl6b	53	51.020
ENSAPEG00000010478	-	89	42.408	ENSAPEG00000012470	-	84	42.408
ENSAPEG00000010478	-	53	40.964	ENSAPEG00000004427	si:ch73-144d13.7	87	40.964
ENSAPEG00000010478	-	67	52.727	ENSAPEG00000007389	-	97	52.727
ENSAPEG00000010478	-	69	49.398	ENSAPEG00000015593	-	93	49.398
ENSAPEG00000010478	-	64	41.121	ENSAPEG00000016462	-	76	40.930
ENSAPEG00000010478	-	93	32.969	ENSAPEG00000013585	-	94	54.386
ENSAPEG00000010478	-	71	41.964	ENSAPEG00000018471	-	88	41.964
ENSAPEG00000010478	-	72	37.425	ENSAPEG00000007141	-	66	37.425
ENSAPEG00000010478	-	51	42.661	ENSAPEG00000012443	-	70	41.525
ENSAPEG00000010478	-	55	32.759	ENSAPEG00000007719	si:dkey-89b17.4	59	32.759
ENSAPEG00000010478	-	50	47.273	ENSAPEG00000009826	-	52	47.273
ENSAPEG00000010478	-	90	40.678	ENSAPEG00000012236	-	68	40.678
ENSAPEG00000010478	-	53	41.935	ENSAPEG00000016601	-	97	41.935
ENSAPEG00000010478	-	64	38.222	ENSAPEG00000003528	zbtb41	59	38.222
ENSAPEG00000010478	-	70	34.323	ENSAPEG00000013088	-	96	34.323
ENSAPEG00000010478	-	90	39.062	ENSAPEG00000012963	-	99	39.062
ENSAPEG00000010478	-	93	47.445	ENSAPEG00000011646	-	96	47.445
ENSAPEG00000010478	-	74	48.515	ENSAPEG00000013550	-	98	48.990
ENSAPEG00000010478	-	58	49.091	ENSAPEG00000010602	-	80	49.091
ENSAPEG00000010478	-	76	42.778	ENSAPEG00000006584	-	80	42.778
ENSAPEG00000010478	-	94	32.684	ENSAPEG00000018332	-	87	32.684
ENSAPEG00000010478	-	54	34.826	ENSAPEG00000000208	ZNF319	82	34.826
ENSAPEG00000010478	-	61	39.912	ENSAPEG00000021575	-	60	39.912
ENSAPEG00000010478	-	96	50.000	ENSAPEG00000004189	-	98	50.000
ENSAPEG00000010478	-	56	38.793	ENSAPEG00000006427	znf646	75	38.793
ENSAPEG00000010478	-	76	52.414	ENSAPEG00000009190	-	76	52.414
ENSAPEG00000010478	-	70	33.333	ENSAPEG00000001556	-	81	33.333
ENSAPEG00000010478	-	69	41.584	ENSAPEG00000008746	-	73	41.631
ENSAPEG00000010478	-	69	43.713	ENSAPEG00000011635	-	83	43.713
ENSAPEG00000010478	-	51	41.991	ENSAPEG00000014848	-	99	46.108
ENSAPEG00000010478	-	93	38.000	ENSAPEG00000010438	-	96	42.202
ENSAPEG00000010478	-	63	42.553	ENSAPEG00000009533	-	85	42.553
ENSAPEG00000010478	-	54	37.500	ENSAPEG00000022511	si:ch211-216l23.1	72	37.500
ENSAPEG00000010478	-	93	38.931	ENSAPEG00000007175	-	96	38.931
ENSAPEG00000010478	-	69	39.512	ENSAPEG00000012599	-	93	39.216
ENSAPEG00000010478	-	50	35.922	ENSAPEG00000000344	znf319b	83	35.922
ENSAPEG00000010478	-	60	42.593	ENSAPEG00000010013	-	84	40.541
ENSAPEG00000010478	-	55	45.181	ENSAPEG00000005678	-	99	39.196
ENSAPEG00000010478	-	71	43.534	ENSAPEG00000014777	-	57	43.534
ENSAPEG00000010478	-	75	46.226	ENSAPEG00000006650	-	94	49.091
ENSAPEG00000010478	-	94	46.875	ENSAPEG00000005566	-	98	46.875
ENSAPEG00000010478	-	71	47.879	ENSAPEG00000009383	-	91	47.879
ENSAPEG00000010478	-	53	44.898	ENSAPEG00000009381	-	65	44.898
ENSAPEG00000010478	-	59	47.778	ENSAPEG00000004256	-	89	47.778
ENSAPEG00000010478	-	71	44.749	ENSAPEG00000015337	-	97	44.749
ENSAPEG00000010478	-	53	39.048	ENSAPEG00000022774	-	83	39.048
ENSAPEG00000010478	-	69	41.743	ENSAPEG00000013097	-	92	41.743
ENSAPEG00000010478	-	52	37.500	ENSAPEG00000016483	-	60	39.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010478	-	50	41.463	ENSAPOG00000000128	-	53	41.463	Acanthochromis_polyacanthus
ENSAPEG00000010478	-	98	90.848	ENSAPOG00000021496	-	100	90.848	Acanthochromis_polyacanthus
ENSAPEG00000010478	-	54	36.872	ENSACIG00000016133	-	59	36.872	Amphilophus_citrinellus
ENSAPEG00000010478	-	90	98.276	ENSAOCG00000000463	-	85	98.276	Amphiprion_ocellaris
ENSAPEG00000010478	-	51	34.513	ENSATEG00000015828	-	66	34.513	Anabas_testudineus
ENSAPEG00000010478	-	55	38.496	ENSATEG00000022022	-	88	38.496	Anabas_testudineus
ENSAPEG00000010478	-	95	63.676	ENSATEG00000024549	-	99	63.676	Anabas_testudineus
ENSAPEG00000010478	-	63	44.242	ENSATEG00000011235	-	65	44.242	Anabas_testudineus
ENSAPEG00000010478	-	80	84.729	ENSATEG00000024551	-	66	84.729	Anabas_testudineus
ENSAPEG00000010478	-	95	42.593	ENSCVAG00000004508	-	98	42.593	Cyprinodon_variegatus
ENSAPEG00000010478	-	93	35.338	ENSELUG00000008171	-	99	32.798	Esox_lucius
ENSAPEG00000010478	-	51	41.706	ENSHBUG00000002878	-	51	39.269	Haplochromis_burtoni
ENSAPEG00000010478	-	56	36.453	ENSHBUG00000000731	-	59	34.848	Haplochromis_burtoni
ENSAPEG00000010478	-	50	46.429	ENSHCOG00000008205	-	73	46.429	Hippocampus_comes
ENSAPEG00000010478	-	93	49.123	ENSIPUG00000024007	-	96	49.123	Ictalurus_punctatus
ENSAPEG00000010478	-	59	40.909	ENSIPUG00000009577	-	59	40.909	Ictalurus_punctatus
ENSAPEG00000010478	-	95	64.745	ENSLBEG00000026552	-	99	64.745	Labrus_bergylta
ENSAPEG00000010478	-	78	38.994	ENSLBEG00000014676	-	85	38.994	Labrus_bergylta
ENSAPEG00000010478	-	94	36.585	ENSLBEG00000011006	-	98	36.585	Labrus_bergylta
ENSAPEG00000010478	-	56	38.053	ENSMZEG00005004047	-	59	34.848	Maylandia_zebra
ENSAPEG00000010478	-	93	39.759	ENSNBRG00000013838	-	98	39.759	Neolamprologus_brichardi
ENSAPEG00000010478	-	51	38.498	ENSNBRG00000004381	-	76	45.536	Neolamprologus_brichardi
ENSAPEG00000010478	-	72	39.130	ENSORLG00000025719	-	87	37.952	Oryzias_latipes
ENSAPEG00000010478	-	50	31.203	ENSORLG00020009554	-	77	31.203	Oryzias_latipes_hni
ENSAPEG00000010478	-	72	39.130	ENSORLG00015012599	-	93	37.952	Oryzias_latipes_hsok
ENSAPEG00000010478	-	93	42.553	ENSOMEG00000010906	-	96	42.553	Oryzias_melastigma
ENSAPEG00000010478	-	94	40.244	ENSPFOG00000012948	-	98	40.244	Poecilia_formosa
ENSAPEG00000010478	-	60	43.114	ENSPLAG00000009651	-	74	43.114	Poecilia_latipinna
ENSAPEG00000010478	-	72	42.446	ENSPMEG00000023113	-	76	42.446	Poecilia_mexicana
ENSAPEG00000010478	-	50	44.025	ENSPREG00000000853	-	51	44.025	Poecilia_reticulata
ENSAPEG00000010478	-	61	39.286	ENSPNYG00000007907	-	56	39.286	Pundamilia_nyererei
ENSAPEG00000010478	-	71	46.853	ENSPNYG00000019187	-	94	38.667	Pundamilia_nyererei
ENSAPEG00000010478	-	65	35.758	ENSPNAG00000010317	-	82	42.791	Pygocentrus_nattereri
ENSAPEG00000010478	-	96	85.682	ENSSPAG00000010524	-	100	85.682	Stegastes_partitus
ENSAPEG00000010478	-	53	43.860	ENSSPAG00000021950	-	86	31.401	Stegastes_partitus