EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000010636 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 58002 bases
Position: chr14:28567665-28625666
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015094	Fox-1_C	PF12414.8	7.7e-29	1	1
ENSAPEP00000015143	Fox-1_C	PF12414.8	4.1e-28	1	1
ENSAPEP00000015136	Fox-1_C	PF12414.8	6.7e-28	1	1
ENSAPEP00000015052	Fox-1_C	PF12414.8	2.4e-25	1	2
ENSAPEP00000015052	Fox-1_C	PF12414.8	2.4e-25	2	2
ENSAPEP00000015052	RRM_1	PF00076.22	3e-09	1	1
ENSAPEP00000015136	RRM_1	PF00076.22	3.8e-09	1	1
ENSAPEP00000015094	RRM_1	PF00076.22	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015486	-	951	-	ENSAPEP00000015094	316 (aa)	-	-
ENSAPET00000015443	-	1023	-	ENSAPEP00000015052	340 (aa)	-	-
ENSAPET00000015536	-	993	-	ENSAPEP00000015143	330 (aa)	-	-
ENSAPET00000015529	-	1086	-	ENSAPEP00000015136	361 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000010636	rbfox1	88	44.262	ENSAPEG00000013905	-	58	56.015
ENSAPEG00000010636	rbfox1	91	54.762	ENSAPEG00000019081	rbfox3b	84	57.962
ENSAPEG00000010636	rbfox1	75	52.843	ENSAPEG00000022359	rbfox2	70	47.813
ENSAPEG00000010636	rbfox1	94	56.176	ENSAPEG00000015891	-	88	55.650
ENSAPEG00000010636	rbfox1	89	48.297	ENSAPEG00000008232	rbfox1l	65	53.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010636	rbfox1	100	71.274	ENSG00000078328	RBFOX1	95	71.390	Homo_sapiens
ENSAPEG00000010636	rbfox1	100	77.546	ENSAPOG00000003197	rbfox1	95	76.762	Acanthochromis_polyacanthus
ENSAPEG00000010636	rbfox1	64	68.396	ENSAMEG00000008605	RBFOX1	82	68.447	Ailuropoda_melanoleuca
ENSAPEG00000010636	rbfox1	72	65.836	ENSACIG00000005478	rbfox1	71	64.413	Amphilophus_citrinellus
ENSAPEG00000010636	rbfox1	78	81.648	ENSAOCG00000008283	rbfox1	91	83.521	Amphiprion_ocellaris
ENSAPEG00000010636	rbfox1	78	79.182	ENSATEG00000007513	rbfox1	91	78.067	Anabas_testudineus
ENSAPEG00000010636	rbfox1	100	70.079	ENSAPLG00000013263	RBFOX1	94	70.185	Anas_platyrhynchos
ENSAPEG00000010636	rbfox1	100	66.927	ENSACAG00000004013	RBFOX1	95	67.016	Anolis_carolinensis
ENSAPEG00000010636	rbfox1	100	75.207	ENSANAG00000029527	RBFOX1	95	75.069	Aotus_nancymaae
ENSAPEG00000010636	rbfox1	64	67.136	ENSAMXG00000002431	rbfox1	60	70.531	Astyanax_mexicanus
ENSAPEG00000010636	rbfox1	100	70.604	ENSBTAG00000007210	RBFOX1	95	70.976	Bos_taurus
ENSAPEG00000010636	rbfox1	100	75.623	ENSCJAG00000017351	RBFOX1	94	75.623	Callithrix_jacchus
ENSAPEG00000010636	rbfox1	100	71.129	ENSCAFG00000019082	RBFOX1	90	71.504	Canis_familiaris
ENSAPEG00000010636	rbfox1	69	67.568	ENSCAFG00020024881	RBFOX1	76	65.314	Canis_lupus_dingo
ENSAPEG00000010636	rbfox1	100	70.341	ENSCHIG00000023549	RBFOX1	95	70.712	Capra_hircus
ENSAPEG00000010636	rbfox1	100	74.931	ENSTSYG00000005334	RBFOX1	95	74.792	Carlito_syrichta
ENSAPEG00000010636	rbfox1	100	71.579	ENSCAPG00000017669	RBFOX1	97	71.693	Cavia_aperea
ENSAPEG00000010636	rbfox1	100	71.579	ENSCPOG00000011314	RBFOX1	96	71.693	Cavia_porcellus
ENSAPEG00000010636	rbfox1	100	71.816	ENSCCAG00000023031	RBFOX1	93	71.935	Cebus_capucinus
ENSAPEG00000010636	rbfox1	100	71.274	ENSCATG00000033816	RBFOX1	93	71.390	Cercocebus_atys
ENSAPEG00000010636	rbfox1	100	71.316	ENSCLAG00000012761	RBFOX1	95	71.429	Chinchilla_lanigera
ENSAPEG00000010636	rbfox1	82	68.350	ENSCSAG00000008739	RBFOX1	85	65.938	Chlorocebus_sabaeus
ENSAPEG00000010636	rbfox1	71	90.769	ENSCHOG00000012843	RBFOX1	60	90.769	Choloepus_hoffmanni
ENSAPEG00000010636	rbfox1	100	70.811	ENSCPBG00000026626	RBFOX1	95	69.737	Chrysemys_picta_bellii
ENSAPEG00000010636	rbfox1	100	71.274	ENSCANG00000033125	RBFOX1	93	71.390	Colobus_angolensis_palliatus
ENSAPEG00000010636	rbfox1	100	70.526	ENSCGRG00001013729	Rbfox1	95	70.635	Cricetulus_griseus_chok1gshd
ENSAPEG00000010636	rbfox1	100	70.526	ENSCGRG00000003272	Rbfox1	95	70.635	Cricetulus_griseus_crigri
ENSAPEG00000010636	rbfox1	100	68.912	ENSCSEG00000008840	rbfox1	100	67.358	Cynoglossus_semilaevis
ENSAPEG00000010636	rbfox1	100	70.652	ENSDARG00000014746	rbfox1	100	71.014	Danio_rerio
ENSAPEG00000010636	rbfox1	100	71.316	ENSDNOG00000043612	RBFOX1	91	71.429	Dasypus_novemcinctus
ENSAPEG00000010636	rbfox1	100	70.079	ENSDORG00000010024	Rbfox1	94	70.341	Dipodomys_ordii
ENSAPEG00000010636	rbfox1	100	59.318	ENSETEG00000003771	RBFOX1	90	59.631	Echinops_telfairi
ENSAPEG00000010636	rbfox1	100	71.579	ENSEASG00005011599	RBFOX1	95	71.504	Equus_asinus_asinus
ENSAPEG00000010636	rbfox1	100	71.129	ENSECAG00000012667	RBFOX1	88	70.765	Equus_caballus
ENSAPEG00000010636	rbfox1	100	59.942	ENSELUG00000013096	rbfox1	93	58.772	Esox_lucius
ENSAPEG00000010636	rbfox1	100	71.545	ENSFCAG00000025322	RBFOX1	86	71.662	Felis_catus
ENSAPEG00000010636	rbfox1	82	68.493	ENSFALG00000004027	RBFOX1	93	65.176	Ficedula_albicollis
ENSAPEG00000010636	rbfox1	100	71.316	ENSFDAG00000007388	RBFOX1	95	71.429	Fukomys_damarensis
ENSAPEG00000010636	rbfox1	100	69.634	ENSGALG00000034325	RBFOX1	90	70.000	Gallus_gallus
ENSAPEG00000010636	rbfox1	100	70.350	ENSGAGG00000023681	RBFOX1	100	69.657	Gopherus_agassizii
ENSAPEG00000010636	rbfox1	100	74.656	ENSGGOG00000016871	-	95	74.515	Gorilla_gorilla
ENSAPEG00000010636	rbfox1	100	71.316	ENSHGLG00000016944	RBFOX1	95	71.429	Heterocephalus_glaber_female
ENSAPEG00000010636	rbfox1	100	71.316	ENSHGLG00100003272	RBFOX1	95	71.429	Heterocephalus_glaber_male
ENSAPEG00000010636	rbfox1	94	70.056	ENSHCOG00000016419	rbfox1	96	69.188	Hippocampus_comes
ENSAPEG00000010636	rbfox1	100	74.286	ENSIPUG00000015215	rbfox1	100	71.739	Ictalurus_punctatus
ENSAPEG00000010636	rbfox1	100	71.579	ENSSTOG00000000322	RBFOX1	96	71.693	Ictidomys_tridecemlineatus
ENSAPEG00000010636	rbfox1	100	71.883	ENSJJAG00000002575	Rbfox1	95	71.353	Jaculus_jaculus
ENSAPEG00000010636	rbfox1	100	78.962	ENSLBEG00000014659	rbfox1	95	78.415	Labrus_bergylta
ENSAPEG00000010636	rbfox1	100	69.792	ENSLOCG00000006675	rbfox1	95	70.157	Lepisosteus_oculatus
ENSAPEG00000010636	rbfox1	80	73.355	ENSLAFG00000011480	RBFOX1	98	74.013	Loxodonta_africana
ENSAPEG00000010636	rbfox1	100	74.656	ENSMFAG00000036447	RBFOX1	93	74.515	Macaca_fascicularis
ENSAPEG00000010636	rbfox1	100	71.274	ENSMMUG00000003458	RBFOX1	95	71.164	Macaca_mulatta
ENSAPEG00000010636	rbfox1	100	70.604	ENSMNEG00000032034	RBFOX1	90	70.976	Macaca_nemestrina
ENSAPEG00000010636	rbfox1	100	71.274	ENSMLEG00000015382	RBFOX1	93	71.390	Mandrillus_leucophaeus
ENSAPEG00000010636	rbfox1	100	73.753	ENSMAMG00000003142	rbfox1	100	71.916	Mastacembelus_armatus
ENSAPEG00000010636	rbfox1	75	67.033	ENSMGAG00000008606	RBFOX1	92	67.159	Meleagris_gallopavo
ENSAPEG00000010636	rbfox1	100	49.412	ENSMAUG00000020570	Rbfox1	94	48.256	Mesocricetus_auratus
ENSAPEG00000010636	rbfox1	100	71.003	ENSMICG00000034286	RBFOX1	93	71.117	Microcebus_murinus
ENSAPEG00000010636	rbfox1	100	70.789	ENSMOCG00000020932	Rbfox1	98	70.899	Microtus_ochrogaster
ENSAPEG00000010636	rbfox1	88	80.645	ENSMMOG00000009716	rbfox1	86	80.000	Mola_mola
ENSAPEG00000010636	rbfox1	82	68.707	ENSMODG00000005826	RBFOX1	90	65.421	Monodelphis_domestica
ENSAPEG00000010636	rbfox1	100	75.000	ENSMALG00000003337	rbfox1	94	73.670	Monopterus_albus
ENSAPEG00000010636	rbfox1	100	70.789	MGP_CAROLIEiJ_G0020427	Rbfox1	95	70.899	Mus_caroli
ENSAPEG00000010636	rbfox1	100	71.053	ENSMUSG00000008658	Rbfox1	99	81.061	Mus_musculus
ENSAPEG00000010636	rbfox1	100	70.789	MGP_PahariEiJ_G0016135	Rbfox1	95	70.899	Mus_pahari
ENSAPEG00000010636	rbfox1	100	70.789	MGP_SPRETEiJ_G0021321	Rbfox1	95	70.899	Mus_spretus
ENSAPEG00000010636	rbfox1	82	68.350	ENSMPUG00000014822	RBFOX1	81	65.625	Mustela_putorius_furo
ENSAPEG00000010636	rbfox1	80	73.597	ENSMLUG00000015896	RBFOX1	98	74.257	Myotis_lucifugus
ENSAPEG00000010636	rbfox1	100	71.053	ENSNGAG00000023276	Rbfox1	97	71.164	Nannospalax_galili
ENSAPEG00000010636	rbfox1	100	62.532	ENSNBRG00000011084	rbfox1	91	61.168	Neolamprologus_brichardi
ENSAPEG00000010636	rbfox1	100	71.003	ENSNLEG00000010017	-	93	71.117	Nomascus_leucogenys
ENSAPEG00000010636	rbfox1	80	93.846	ENSMEUG00000012525	RBFOX1	68	93.846	Notamacropus_eugenii
ENSAPEG00000010636	rbfox1	76	97.500	ENSOPRG00000006199	-	59	97.500	Ochotona_princeps
ENSAPEG00000010636	rbfox1	100	71.579	ENSODEG00000013166	RBFOX1	95	71.693	Octodon_degus
ENSAPEG00000010636	rbfox1	82	68.367	ENSOANG00000002379	RBFOX1	85	65.109	Ornithorhynchus_anatinus
ENSAPEG00000010636	rbfox1	64	70.283	ENSOCUG00000001205	-	91	70.732	Oryctolagus_cuniculus
ENSAPEG00000010636	rbfox1	100	71.053	ENSOGAG00000025535	RBFOX1	95	71.164	Otolemur_garnettii
ENSAPEG00000010636	rbfox1	64	66.029	ENSOARG00000005135	RBFOX1	86	64.977	Ovis_aries
ENSAPEG00000010636	rbfox1	100	74.656	ENSPPAG00000036238	-	95	74.515	Pan_paniscus
ENSAPEG00000010636	rbfox1	100	71.545	ENSPPRG00000006546	RBFOX1	93	71.662	Panthera_pardus
ENSAPEG00000010636	rbfox1	100	65.833	ENSPTIG00000021154	RBFOX1	96	65.363	Panthera_tigris_altaica
ENSAPEG00000010636	rbfox1	100	74.656	ENSPTRG00000007744	RBFOX1	95	74.515	Pan_troglodytes
ENSAPEG00000010636	rbfox1	100	71.274	ENSPANG00000026500	RBFOX1	93	71.390	Papio_anubis
ENSAPEG00000010636	rbfox1	78	75.781	ENSPKIG00000019353	rbfox1	82	75.591	Paramormyrops_kingsleyae
ENSAPEG00000010636	rbfox1	100	69.382	ENSPKIG00000009667	-	95	69.359	Paramormyrops_kingsleyae
ENSAPEG00000010636	rbfox1	100	69.816	ENSPSIG00000006523	RBFOX1	94	69.921	Pelodiscus_sinensis
ENSAPEG00000010636	rbfox1	100	70.789	ENSPEMG00000017607	Rbfox1	95	70.899	Peromyscus_maniculatus_bairdii
ENSAPEG00000010636	rbfox1	76	75.000	ENSPCIG00000026887	RBFOX1	100	77.465	Phascolarctos_cinereus
ENSAPEG00000010636	rbfox1	82	68.350	ENSPPYG00000007079	-	81	65.938	Pongo_abelii
ENSAPEG00000010636	rbfox1	88	61.947	ENSPCAG00000002630	RBFOX1	89	62.537	Procavia_capensis
ENSAPEG00000010636	rbfox1	100	71.274	ENSPCOG00000025687	RBFOX1	93	71.390	Propithecus_coquereli
ENSAPEG00000010636	rbfox1	100	67.277	ENSPVAG00000013467	RBFOX1	90	67.632	Pteropus_vampyrus
ENSAPEG00000010636	rbfox1	100	67.436	ENSPNAG00000023109	rbfox1	100	68.299	Pygocentrus_nattereri
ENSAPEG00000010636	rbfox1	100	70.526	ENSRNOG00000002827	Rbfox1	90	70.635	Rattus_norvegicus
ENSAPEG00000010636	rbfox1	100	71.274	ENSRBIG00000044478	RBFOX1	97	71.390	Rhinopithecus_bieti
ENSAPEG00000010636	rbfox1	100	71.274	ENSRROG00000044411	RBFOX1	93	71.390	Rhinopithecus_roxellana
ENSAPEG00000010636	rbfox1	100	75.482	ENSSBOG00000033726	RBFOX1	95	75.346	Saimiri_boliviensis_boliviensis
ENSAPEG00000010636	rbfox1	100	70.079	ENSSHAG00000009257	RBFOX1	95	70.185	Sarcophilus_harrisii
ENSAPEG00000010636	rbfox1	100	66.006	ENSSFOG00015023675	rbfox1	94	65.242	Scleropages_formosus
ENSAPEG00000010636	rbfox1	99	58.649	ENSSFOG00015009955	-	81	63.609	Scleropages_formosus
ENSAPEG00000010636	rbfox1	100	75.916	ENSSMAG00000015505	rbfox1	89	74.607	Scophthalmus_maximus
ENSAPEG00000010636	rbfox1	100	82.203	ENSSDUG00000016413	rbfox1	95	82.000	Seriola_dumerili
ENSAPEG00000010636	rbfox1	99	72.527	ENSSLDG00000009353	rbfox1	93	83.051	Seriola_lalandi_dorsalis
ENSAPEG00000010636	rbfox1	92	67.647	ENSSPUG00000009732	RBFOX1	89	68.047	Sphenodon_punctatus
ENSAPEG00000010636	rbfox1	100	88.000	ENSSPAG00000009723	rbfox1	96	88.000	Stegastes_partitus
ENSAPEG00000010636	rbfox1	96	70.027	ENSSSCG00000007917	RBFOX1	88	70.137	Sus_scrofa
ENSAPEG00000010636	rbfox1	100	70.079	ENSTGUG00000004562	RBFOX1	97	70.185	Taeniopygia_guttata
ENSAPEG00000010636	rbfox1	100	75.853	ENSTRUG00000020940	rbfox1	96	73.491	Takifugu_rubripes
ENSAPEG00000010636	rbfox1	66	65.462	ENSTNIG00000002567	rbfox1	97	67.871	Tetraodon_nigroviridis
ENSAPEG00000010636	rbfox1	53	97.500	ENSTBEG00000009169	-	56	72.603	Tupaia_belangeri
ENSAPEG00000010636	rbfox1	100	70.604	ENSTTRG00000005700	RBFOX1	90	70.976	Tursiops_truncatus
ENSAPEG00000010636	rbfox1	100	75.207	ENSUAMG00000024633	RBFOX1	100	70.752	Ursus_americanus
ENSAPEG00000010636	rbfox1	100	68.079	ENSUMAG00000003579	RBFOX1	95	67.227	Ursus_maritimus
ENSAPEG00000010636	rbfox1	80	73.026	ENSVPAG00000001284	RBFOX1	72	73.684	Vicugna_pacos
ENSAPEG00000010636	rbfox1	100	71.816	ENSVVUG00000017311	RBFOX1	100	61.869	Vulpes_vulpes