EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPEG00000010638 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 12695 bases
Position: chr7:22783120-22795814
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015097	tRNA-synt_1g	PF09334.11	6.5e-12	1	1
ENSAPEP00000015066	tRNA-synt_1g	PF09334.11	7e-12	1	1
ENSAPEP00000015066	Anticodon_1	PF08264.13	4.7e-35	1	1
ENSAPEP00000015097	Anticodon_1	PF08264.13	5.2e-35	1	1
ENSAPEP00000015066	tRNA-synt_1	PF00133.22	7.6e-208	1	1
ENSAPEP00000015097	tRNA-synt_1	PF00133.22	7.7e-208	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015457	-	5078	-	ENSAPEP00000015066	1286 (aa)	-	-
ENSAPET00000015489	-	3792	-	ENSAPEP00000015097	1263 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPEG00000010638	vars	77	50.050	ENSAPEG00000008646	vars2	90	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010638	vars	99	64.564	ENSG00000204394	VARS	99	73.006	Homo_sapiens
ENSAPEG00000010638	vars	94	97.199	ENSAPOG00000020921	vars	97	97.199	Acanthochromis_polyacanthus
ENSAPEG00000010638	vars	94	97.199	ENSAPOG00000020691	vars	97	97.199	Acanthochromis_polyacanthus
ENSAPEG00000010638	vars	99	64.981	ENSAMEG00000006417	VARS	100	64.961	Ailuropoda_melanoleuca
ENSAPEG00000010638	vars	99	91.137	ENSACIG00000013752	vars	100	91.137	Amphilophus_citrinellus
ENSAPEG00000010638	vars	100	99.767	ENSAOCG00000002447	vars	100	99.767	Amphiprion_ocellaris
ENSAPEG00000010638	vars	99	87.608	ENSATEG00000020219	vars	100	88.016	Anabas_testudineus
ENSAPEG00000010638	vars	89	71.875	ENSACAG00000029133	-	99	71.875	Anolis_carolinensis
ENSAPEG00000010638	vars	99	64.330	ENSANAG00000015453	VARS	100	64.313	Aotus_nancymaae
ENSAPEG00000010638	vars	100	91.550	ENSACLG00000025699	vars	98	91.550	Astatotilapia_calliptera
ENSAPEG00000010638	vars	95	80.508	ENSAMXG00000017716	vars	96	80.913	Astyanax_mexicanus
ENSAPEG00000010638	vars	99	64.798	ENSBTAG00000005631	VARS	100	64.779	Bos_taurus
ENSAPEG00000010638	vars	99	64.436	ENSCJAG00000002604	VARS	100	64.419	Callithrix_jacchus
ENSAPEG00000010638	vars	99	64.408	ENSCAFG00000000636	VARS	100	64.391	Canis_familiaris
ENSAPEG00000010638	vars	93	65.615	ENSCAFG00020020790	VARS	96	65.591	Canis_lupus_dingo
ENSAPEG00000010638	vars	99	64.798	ENSCHIG00000011008	VARS	100	64.779	Capra_hircus
ENSAPEG00000010638	vars	99	64.541	ENSTSYG00000001567	VARS	100	64.524	Carlito_syrichta
ENSAPEG00000010638	vars	90	67.761	ENSCAPG00000013736	VARS	98	67.444	Cavia_aperea
ENSAPEG00000010638	vars	99	64.258	ENSCPOG00000000870	VARS	100	64.047	Cavia_porcellus
ENSAPEG00000010638	vars	99	64.486	ENSCCAG00000035656	VARS	100	64.313	Cebus_capucinus
ENSAPEG00000010638	vars	99	64.953	ENSCATG00000022394	VARS	100	64.779	Cercocebus_atys
ENSAPEG00000010638	vars	89	65.590	ENSCLAG00000009470	VARS	93	65.362	Chinchilla_lanigera
ENSAPEG00000010638	vars	99	64.798	ENSCSAG00000008784	VARS	100	64.624	Chlorocebus_sabaeus
ENSAPEG00000010638	vars	78	74.338	ENSCPBG00000007943	VARS	96	74.414	Chrysemys_picta_bellii
ENSAPEG00000010638	vars	99	64.953	ENSCANG00000033570	VARS	100	64.779	Colobus_angolensis_palliatus
ENSAPEG00000010638	vars	99	64.564	ENSCGRG00001005686	Vars	100	64.624	Cricetulus_griseus_chok1gshd
ENSAPEG00000010638	vars	92	62.932	ENSCGRG00000013352	Vars	78	63.002	Cricetulus_griseus_crigri
ENSAPEG00000010638	vars	99	83.516	ENSCSEG00000019652	vars	100	83.516	Cynoglossus_semilaevis
ENSAPEG00000010638	vars	99	90.831	ENSCVAG00000022398	vars	100	90.831	Cyprinodon_variegatus
ENSAPEG00000010638	vars	99	84.404	ENSDARG00000044575	vars	100	84.561	Danio_rerio
ENSAPEG00000010638	vars	85	68.137	ENSDORG00000016433	Vars	99	68.227	Dipodomys_ordii
ENSAPEG00000010638	vars	68	74.684	ENSETEG00000003824	VARS	77	74.684	Echinops_telfairi
ENSAPEG00000010638	vars	58	65.527	ENSEBUG00000004637	vars	100	65.527	Eptatretus_burgeri
ENSAPEG00000010638	vars	51	73.137	ENSEBUG00000007086	vars	82	73.137	Eptatretus_burgeri
ENSAPEG00000010638	vars	99	64.875	ENSEASG00005015673	VARS	100	64.856	Equus_asinus_asinus
ENSAPEG00000010638	vars	99	64.747	ENSECAG00000014620	VARS	100	64.884	Equus_caballus
ENSAPEG00000010638	vars	82	71.679	ENSEEUG00000004116	VARS	83	71.679	Erinaceus_europaeus
ENSAPEG00000010638	vars	99	84.764	ENSELUG00000006550	vars	98	84.657	Esox_lucius
ENSAPEG00000010638	vars	99	64.875	ENSFCAG00000004510	VARS	100	64.779	Felis_catus
ENSAPEG00000010638	vars	83	70.319	ENSFDAG00000011401	VARS	100	70.209	Fukomys_damarensis
ENSAPEG00000010638	vars	99	89.655	ENSFHEG00000010672	vars	100	89.655	Fundulus_heteroclitus
ENSAPEG00000010638	vars	99	82.307	ENSGMOG00000014908	vars	100	82.541	Gadus_morhua
ENSAPEG00000010638	vars	99	90.581	ENSGAFG00000021630	vars	100	90.581	Gambusia_affinis
ENSAPEG00000010638	vars	92	90.848	ENSGACG00000009601	vars	100	87.001	Gasterosteus_aculeatus
ENSAPEG00000010638	vars	99	64.798	ENSGGOG00000011364	VARS	100	64.624	Gorilla_gorilla
ENSAPEG00000010638	vars	100	91.628	ENSHBUG00000017151	vars	98	91.628	Haplochromis_burtoni
ENSAPEG00000010638	vars	99	64.147	ENSHGLG00000011646	VARS	100	64.147	Heterocephalus_glaber_female
ENSAPEG00000010638	vars	92	61.171	ENSHGLG00100018062	VARS	99	61.171	Heterocephalus_glaber_male
ENSAPEG00000010638	vars	99	84.711	ENSHCOG00000012198	vars	99	85.055	Hippocampus_comes
ENSAPEG00000010638	vars	99	83.150	ENSIPUG00000005218	vars	100	83.856	Ictalurus_punctatus
ENSAPEG00000010638	vars	99	65.031	ENSSTOG00000013112	VARS	100	64.880	Ictidomys_tridecemlineatus
ENSAPEG00000010638	vars	99	52.355	ENSJJAG00000015343	-	100	52.355	Jaculus_jaculus
ENSAPEG00000010638	vars	99	63.941	ENSJJAG00000019749	-	100	64.119	Jaculus_jaculus
ENSAPEG00000010638	vars	99	88.050	ENSKMAG00000009455	vars	100	88.050	Kryptolebias_marmoratus
ENSAPEG00000010638	vars	99	87.262	ENSLBEG00000010341	vars	100	86.853	Labrus_bergylta
ENSAPEG00000010638	vars	93	66.530	ENSLACG00000015232	VARS	99	66.639	Latimeria_chalumnae
ENSAPEG00000010638	vars	99	75.020	ENSLOCG00000004240	vars	100	74.784	Lepisosteus_oculatus
ENSAPEG00000010638	vars	99	64.330	ENSLAFG00000023090	VARS	100	64.330	Loxodonta_africana
ENSAPEG00000010638	vars	99	64.798	ENSMFAG00000001032	VARS	100	64.624	Macaca_fascicularis
ENSAPEG00000010638	vars	99	64.798	ENSMMUG00000006828	VARS	100	64.624	Macaca_mulatta
ENSAPEG00000010638	vars	99	64.798	ENSMNEG00000042072	VARS	100	64.624	Macaca_nemestrina
ENSAPEG00000010638	vars	99	64.875	ENSMLEG00000039307	VARS	100	64.701	Mandrillus_leucophaeus
ENSAPEG00000010638	vars	99	92.060	ENSMAMG00000003949	vars	100	92.060	Mastacembelus_armatus
ENSAPEG00000010638	vars	100	91.550	ENSMZEG00005018327	vars	98	91.550	Maylandia_zebra
ENSAPEG00000010638	vars	99	64.642	ENSMAUG00000006715	Vars	100	64.701	Mesocricetus_auratus
ENSAPEG00000010638	vars	99	64.798	ENSMICG00000003548	VARS	100	64.569	Microcebus_murinus
ENSAPEG00000010638	vars	99	63.289	ENSMOCG00000015404	Vars	100	63.367	Microtus_ochrogaster
ENSAPEG00000010638	vars	99	87.264	ENSMMOG00000015801	vars	100	87.264	Mola_mola
ENSAPEG00000010638	vars	99	65.187	ENSMODG00000015204	-	100	64.534	Monodelphis_domestica
ENSAPEG00000010638	vars	99	90.831	ENSMALG00000022532	vars	99	90.831	Monopterus_albus
ENSAPEG00000010638	vars	99	65.004	MGP_CAROLIEiJ_G0021491	Vars	100	65.004	Mus_caroli
ENSAPEG00000010638	vars	99	64.848	ENSMUSG00000007029	Vars	100	64.848	Mus_musculus
ENSAPEG00000010638	vars	99	64.770	MGP_PahariEiJ_G0020486	Vars	100	64.770	Mus_pahari
ENSAPEG00000010638	vars	99	64.926	MGP_SPRETEiJ_G0022396	Vars	100	64.926	Mus_spretus
ENSAPEG00000010638	vars	99	64.642	ENSMPUG00000010821	VARS	100	64.624	Mustela_putorius_furo
ENSAPEG00000010638	vars	77	67.764	ENSMLUG00000013126	VARS	100	67.527	Myotis_lucifugus
ENSAPEG00000010638	vars	99	64.825	ENSNGAG00000012151	Vars	100	64.875	Nannospalax_galili
ENSAPEG00000010638	vars	99	91.614	ENSNBRG00000020520	vars	100	91.614	Neolamprologus_brichardi
ENSAPEG00000010638	vars	99	64.642	ENSNLEG00000006351	VARS	100	64.624	Nomascus_leucogenys
ENSAPEG00000010638	vars	99	63.367	ENSMEUG00000011378	VARS	100	63.474	Notamacropus_eugenii
ENSAPEG00000010638	vars	99	64.875	ENSOPRG00000003607	VARS	100	64.934	Ochotona_princeps
ENSAPEG00000010638	vars	99	63.757	ENSODEG00000017681	VARS	100	63.679	Octodon_degus
ENSAPEG00000010638	vars	99	91.243	ENSONIG00000013064	vars	100	93.118	Oreochromis_niloticus
ENSAPEG00000010638	vars	76	67.769	ENSOANG00000005400	VARS	98	67.414	Ornithorhynchus_anatinus
ENSAPEG00000010638	vars	99	63.629	ENSOCUG00000022463	VARS	100	63.396	Oryctolagus_cuniculus
ENSAPEG00000010638	vars	99	88.941	ENSORLG00000013063	vars	100	88.941	Oryzias_latipes
ENSAPEG00000010638	vars	99	89.593	ENSORLG00020003504	vars	100	89.515	Oryzias_latipes_hni
ENSAPEG00000010638	vars	99	89.663	ENSORLG00015009001	vars	100	89.742	Oryzias_latipes_hsok
ENSAPEG00000010638	vars	99	90.368	ENSOMEG00000015016	vars	100	90.368	Oryzias_melastigma
ENSAPEG00000010638	vars	99	64.252	ENSOGAG00000007515	VARS	100	64.081	Otolemur_garnettii
ENSAPEG00000010638	vars	99	64.564	ENSPPAG00000034012	VARS	100	64.546	Pan_paniscus
ENSAPEG00000010638	vars	99	64.875	ENSPPRG00000014855	VARS	100	64.779	Panthera_pardus
ENSAPEG00000010638	vars	84	69.210	ENSPTIG00000010462	VARS	93	68.915	Panthera_tigris_altaica
ENSAPEG00000010638	vars	99	64.486	ENSPTRG00000017985	VARS	100	64.469	Pan_troglodytes
ENSAPEG00000010638	vars	99	63.390	ENSPANG00000014565	VARS	100	63.223	Papio_anubis
ENSAPEG00000010638	vars	99	81.542	ENSPKIG00000016304	vars	100	81.542	Paramormyrops_kingsleyae
ENSAPEG00000010638	vars	99	84.827	ENSPMGG00000023909	vars	100	84.827	Periophthalmus_magnuspinnatus
ENSAPEG00000010638	vars	99	64.408	ENSPEMG00000006639	Vars	100	64.469	Peromyscus_maniculatus_bairdii
ENSAPEG00000010638	vars	99	65.187	ENSPCIG00000018553	VARS	100	64.534	Phascolarctos_cinereus
ENSAPEG00000010638	vars	99	90.424	ENSPFOG00000015690	vars	100	90.424	Poecilia_formosa
ENSAPEG00000010638	vars	99	90.267	ENSPLAG00000009590	vars	100	90.267	Poecilia_latipinna
ENSAPEG00000010638	vars	99	90.345	ENSPMEG00000004708	vars	100	90.345	Poecilia_mexicana
ENSAPEG00000010638	vars	99	85.557	ENSPREG00000013264	vars	99	93.628	Poecilia_reticulata
ENSAPEG00000010638	vars	99	63.240	ENSPPYG00000016460	VARS	100	63.072	Pongo_abelii
ENSAPEG00000010638	vars	85	65.897	ENSPCAG00000013565	VARS	86	65.897	Procavia_capensis
ENSAPEG00000010638	vars	99	64.436	ENSPCOG00000010942	VARS	100	64.574	Propithecus_coquereli
ENSAPEG00000010638	vars	99	62.345	ENSPVAG00000012403	VARS	100	62.374	Pteropus_vampyrus
ENSAPEG00000010638	vars	99	91.771	ENSPNYG00000022511	vars	100	91.771	Pundamilia_nyererei
ENSAPEG00000010638	vars	99	84.676	ENSPNAG00000020962	vars	100	84.910	Pygocentrus_nattereri
ENSAPEG00000010638	vars	99	64.564	ENSRNOG00000000867	Vars	100	64.391	Rattus_norvegicus
ENSAPEG00000010638	vars	99	64.875	ENSRBIG00000041669	VARS	100	64.701	Rhinopithecus_bieti
ENSAPEG00000010638	vars	99	64.875	ENSRROG00000045490	VARS	100	64.701	Rhinopithecus_roxellana
ENSAPEG00000010638	vars	99	64.019	ENSSBOG00000035402	VARS	100	64.003	Saimiri_boliviensis_boliviensis
ENSAPEG00000010638	vars	99	64.396	ENSSHAG00000006937	VARS	100	63.942	Sarcophilus_harrisii
ENSAPEG00000010638	vars	99	80.967	ENSSFOG00015014272	vars	99	85.874	Scleropages_formosus
ENSAPEG00000010638	vars	99	89.977	ENSSMAG00000009596	vars	99	89.977	Scophthalmus_maximus
ENSAPEG00000010638	vars	99	92.639	ENSSDUG00000014177	vars	100	92.796	Seriola_dumerili
ENSAPEG00000010638	vars	99	92.091	ENSSLDG00000025316	vars	100	92.247	Seriola_lalandi_dorsalis
ENSAPEG00000010638	vars	99	94.969	ENSSPAG00000017068	vars	100	94.969	Stegastes_partitus
ENSAPEG00000010638	vars	99	64.358	ENSSSCG00000038950	VARS	100	64.496	Sus_scrofa
ENSAPEG00000010638	vars	81	81.627	ENSTRUG00000012307	vars	98	81.602	Takifugu_rubripes
ENSAPEG00000010638	vars	99	87.206	ENSTNIG00000008011	vars	100	87.206	Tetraodon_nigroviridis
ENSAPEG00000010638	vars	99	58.924	ENSTTRG00000014128	VARS	100	58.924	Tursiops_truncatus
ENSAPEG00000010638	vars	99	63.297	ENSUAMG00000010424	VARS	100	63.502	Ursus_americanus
ENSAPEG00000010638	vars	99	59.860	ENSUMAG00000013486	VARS	100	60.094	Ursus_maritimus
ENSAPEG00000010638	vars	99	64.619	ENSVVUG00000021323	VARS	100	64.341	Vulpes_vulpes
ENSAPEG00000010638	vars	99	65.214	ENSXETG00000024076	vars	100	65.089	Xenopus_tropicalis
ENSAPEG00000010638	vars	99	88.531	ENSXCOG00000019172	vars	100	88.531	Xiphophorus_couchianus
ENSAPEG00000010638	vars	99	90.502	ENSXMAG00000010927	vars	100	90.502	Xiphophorus_maculatus