EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPEG00000010661 (Gene tree)
Gene ID: -
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease (deadenylation nuclease)
Gene Type: protein_coding
Species: Amphiprion_percula
Status: putative
Strand: Minus strand
Length: 8368 bases
Position: chr3:3671591-3679958
Accession: ZDB-GENE-040426-880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPEP00000015053	R3H	PF01424.22	1.8e-05	1	1
ENSAPEP00000015053	RNA_bind	PF08675.11	4.9e-34	1	1
ENSAPEP00000015053	CAF1	PF04857.20	3.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPET00000015444	-	1566	-	ENSAPEP00000015053	521 (aa)	-	-

Gene Model

Click here to download ENSAPEG00000010661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPEG00000010661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPEG00000010661	parn	91	77.778	ENSG00000140694	PARN	99	70.035	Homo_sapiens
ENSAPEG00000010661	parn	91	77.848	ENSAMEG00000011208	PARN	74	77.848	Ailuropoda_melanoleuca
ENSAPEG00000010661	parn	96	89.243	ENSACIG00000000619	parn	78	89.243	Amphilophus_citrinellus
ENSAPEG00000010661	parn	94	99.387	ENSAOCG00000003465	parn	71	99.387	Amphiprion_ocellaris
ENSAPEG00000010661	parn	94	94.094	ENSATEG00000004661	parn	72	94.094	Anabas_testudineus
ENSAPEG00000010661	parn	91	77.167	ENSAPLG00000013914	PARN	74	77.590	Anas_platyrhynchos
ENSAPEG00000010661	parn	91	78.105	ENSACAG00000004973	PARN	73	78.105	Anolis_carolinensis
ENSAPEG00000010661	parn	91	78.436	ENSANAG00000031516	PARN	74	78.436	Aotus_nancymaae
ENSAPEG00000010661	parn	94	94.274	ENSACLG00000004742	parn	72	94.274	Astatotilapia_calliptera
ENSAPEG00000010661	parn	92	84.407	ENSAMXG00000012390	parn	77	81.818	Astyanax_mexicanus
ENSAPEG00000010661	parn	91	77.801	ENSBTAG00000018097	PARN	81	77.801	Bos_taurus
ENSAPEG00000010661	parn	91	77.987	ENSCJAG00000015866	PARN	74	77.987	Callithrix_jacchus
ENSAPEG00000010661	parn	91	77.801	ENSCAFG00000018795	PARN	74	77.801	Canis_familiaris
ENSAPEG00000010661	parn	91	78.013	ENSCAFG00020024126	PARN	74	78.013	Canis_lupus_dingo
ENSAPEG00000010661	parn	91	77.801	ENSCHIG00000018143	PARN	74	77.801	Capra_hircus
ENSAPEG00000010661	parn	79	51.522	ENSCAPG00000007984	PARN	68	51.522	Cavia_aperea
ENSAPEG00000010661	parn	91	76.744	ENSCPOG00000002263	PARN	74	76.744	Cavia_porcellus
ENSAPEG00000010661	parn	91	77.987	ENSCCAG00000030367	PARN	74	77.987	Cebus_capucinus
ENSAPEG00000010661	parn	91	78.224	ENSCATG00000041368	PARN	84	78.224	Cercocebus_atys
ENSAPEG00000010661	parn	54	37.805	ENSCATG00000033196	PNLDC1	59	37.805	Cercocebus_atys
ENSAPEG00000010661	parn	91	78.013	ENSCLAG00000015406	PARN	74	78.013	Chinchilla_lanigera
ENSAPEG00000010661	parn	91	77.987	ENSCSAG00000008142	PARN	74	77.987	Chlorocebus_sabaeus
ENSAPEG00000010661	parn	91	58.562	ENSCHOG00000007014	PARN	74	58.562	Choloepus_hoffmanni
ENSAPEG00000010661	parn	91	79.281	ENSCPBG00000006609	PARN	81	79.281	Chrysemys_picta_bellii
ENSAPEG00000010661	parn	86	42.675	ENSCING00000010142	-	89	42.675	Ciona_intestinalis
ENSAPEG00000010661	parn	91	64.490	ENSCANG00000028849	-	73	64.490	Colobus_angolensis_palliatus
ENSAPEG00000010661	parn	91	76.744	ENSCGRG00001012096	Parn	74	76.744	Cricetulus_griseus_chok1gshd
ENSAPEG00000010661	parn	91	76.744	ENSCGRG00000004939	Parn	74	76.744	Cricetulus_griseus_crigri
ENSAPEG00000010661	parn	94	86.789	ENSCSEG00000002064	parn	72	86.789	Cynoglossus_semilaevis
ENSAPEG00000010661	parn	95	88.956	ENSCVAG00000014848	parn	73	88.956	Cyprinodon_variegatus
ENSAPEG00000010661	parn	93	76.531	ENSDARG00000102634	parn	75	76.531	Danio_rerio
ENSAPEG00000010661	parn	91	78.013	ENSDNOG00000000833	PARN	83	78.013	Dasypus_novemcinctus
ENSAPEG00000010661	parn	69	74.129	ENSETEG00000014828	-	59	74.129	Echinops_telfairi
ENSAPEG00000010661	parn	91	78.013	ENSEASG00005011400	PARN	74	78.013	Equus_asinus_asinus
ENSAPEG00000010661	parn	91	77.801	ENSECAG00000017792	PARN	74	77.801	Equus_caballus
ENSAPEG00000010661	parn	74	59.748	ENSEEUG00000010370	PARN	60	59.748	Erinaceus_europaeus
ENSAPEG00000010661	parn	93	83.197	ENSELUG00000013139	parn	63	84.551	Esox_lucius
ENSAPEG00000010661	parn	91	78.224	ENSFCAG00000044961	PARN	74	78.224	Felis_catus
ENSAPEG00000010661	parn	91	77.378	ENSFALG00000003911	PARN	73	77.801	Ficedula_albicollis
ENSAPEG00000010661	parn	93	75.615	ENSFDAG00000009234	PARN	76	75.615	Fukomys_damarensis
ENSAPEG00000010661	parn	95	81.124	ENSFHEG00000013738	parn	77	81.124	Fundulus_heteroclitus
ENSAPEG00000010661	parn	93	84.663	ENSGMOG00000003231	parn	89	84.663	Gadus_morhua
ENSAPEG00000010661	parn	93	75.205	ENSGALG00000003091	PARN	76	75.410	Gallus_gallus
ENSAPEG00000010661	parn	95	87.625	ENSGAFG00000011061	parn	73	87.625	Gambusia_affinis
ENSAPEG00000010661	parn	100	80.462	ENSGACG00000019501	parn	90	80.462	Gasterosteus_aculeatus
ENSAPEG00000010661	parn	91	77.778	ENSGGOG00000025224	PARN	76	77.778	Gorilla_gorilla
ENSAPEG00000010661	parn	94	94.479	ENSHBUG00000017906	parn	90	86.567	Haplochromis_burtoni
ENSAPEG00000010661	parn	91	76.956	ENSHGLG00000010886	PARN	74	76.956	Heterocephalus_glaber_female
ENSAPEG00000010661	parn	91	76.956	ENSHGLG00100014659	PARN	74	76.956	Heterocephalus_glaber_male
ENSAPEG00000010661	parn	100	80.153	ENSHCOG00000008683	parn	90	80.153	Hippocampus_comes
ENSAPEG00000010661	parn	92	71.279	ENSIPUG00000012401	parn	69	71.548	Ictalurus_punctatus
ENSAPEG00000010661	parn	96	73.360	ENSSTOG00000007519	PARN	79	73.360	Ictidomys_tridecemlineatus
ENSAPEG00000010661	parn	91	76.533	ENSJJAG00000023049	Parn	75	76.533	Jaculus_jaculus
ENSAPEG00000010661	parn	93	91.411	ENSKMAG00000009462	parn	72	91.411	Kryptolebias_marmoratus
ENSAPEG00000010661	parn	94	91.446	ENSLBEG00000009167	parn	77	91.446	Labrus_bergylta
ENSAPEG00000010661	parn	86	78.076	ENSLACG00000004207	PARN	85	78.947	Latimeria_chalumnae
ENSAPEG00000010661	parn	97	79.762	ENSLOCG00000000715	parn	73	79.762	Lepisosteus_oculatus
ENSAPEG00000010661	parn	95	75.506	ENSLAFG00000015036	PARN	79	74.950	Loxodonta_africana
ENSAPEG00000010661	parn	50	31.111	ENSLAFG00000030189	PNLDC1	71	31.111	Loxodonta_africana
ENSAPEG00000010661	parn	91	77.987	ENSMFAG00000044852	PARN	82	77.987	Macaca_fascicularis
ENSAPEG00000010661	parn	91	77.987	ENSMMUG00000018849	PARN	74	77.987	Macaca_mulatta
ENSAPEG00000010661	parn	91	77.987	ENSMNEG00000045108	PARN	74	77.987	Macaca_nemestrina
ENSAPEG00000010661	parn	91	77.778	ENSMLEG00000031743	PARN	82	77.778	Mandrillus_leucophaeus
ENSAPEG00000010661	parn	94	93.902	ENSMAMG00000006939	parn	72	93.902	Mastacembelus_armatus
ENSAPEG00000010661	parn	94	94.479	ENSMZEG00005013590	parn	90	86.304	Maylandia_zebra
ENSAPEG00000010661	parn	93	75.410	ENSMGAG00000001004	PARN	76	75.410	Meleagris_gallopavo
ENSAPEG00000010661	parn	91	72.840	ENSMAUG00000008025	Parn	78	72.840	Mesocricetus_auratus
ENSAPEG00000010661	parn	51	35.443	ENSMAUG00000012298	Pnldc1	54	35.443	Mesocricetus_auratus
ENSAPEG00000010661	parn	93	76.434	ENSMICG00000016053	PARN	76	76.434	Microcebus_murinus
ENSAPEG00000010661	parn	83	78.571	ENSMOCG00000022211	Parn	87	78.571	Microtus_ochrogaster
ENSAPEG00000010661	parn	100	82.696	ENSMMOG00000011333	parn	90	82.696	Mola_mola
ENSAPEG00000010661	parn	83	80.645	ENSMODG00000004915	PARN	87	80.645	Monodelphis_domestica
ENSAPEG00000010661	parn	100	90.909	ENSMALG00000019426	parn	89	90.909	Monopterus_albus
ENSAPEG00000010661	parn	95	73.535	MGP_CAROLIEiJ_G0020466	Parn	78	73.535	Mus_caroli
ENSAPEG00000010661	parn	95	73.737	ENSMUSG00000022685	Parn	78	73.737	Mus_musculus
ENSAPEG00000010661	parn	50	30.258	ENSMUSG00000073460	Pnldc1	77	30.258	Mus_musculus
ENSAPEG00000010661	parn	95	73.333	MGP_PahariEiJ_G0016172	Parn	78	73.333	Mus_pahari
ENSAPEG00000010661	parn	95	73.333	MGP_SPRETEiJ_G0021361	Parn	78	73.333	Mus_spretus
ENSAPEG00000010661	parn	91	78.436	ENSMPUG00000014464	PARN	76	76.434	Mustela_putorius_furo
ENSAPEG00000010661	parn	83	78.802	ENSMLUG00000005414	PARN	88	78.802	Myotis_lucifugus
ENSAPEG00000010661	parn	100	86.742	ENSNBRG00000006805	parn	90	86.742	Neolamprologus_brichardi
ENSAPEG00000010661	parn	91	77.987	ENSNLEG00000010241	PARN	74	77.987	Nomascus_leucogenys
ENSAPEG00000010661	parn	79	62.069	ENSMEUG00000008178	-	65	62.069	Notamacropus_eugenii
ENSAPEG00000010661	parn	93	70.021	ENSOPRG00000012187	PARN	77	70.021	Ochotona_princeps
ENSAPEG00000010661	parn	91	69.958	ENSODEG00000001617	PARN	75	69.958	Octodon_degus
ENSAPEG00000010661	parn	94	94.888	ENSONIG00000000151	parn	74	94.947	Oreochromis_niloticus
ENSAPEG00000010661	parn	52	83.150	ENSOANG00000020155	-	70	83.150	Ornithorhynchus_anatinus
ENSAPEG00000010661	parn	93	76.434	ENSOCUG00000000322	PARN	76	76.434	Oryctolagus_cuniculus
ENSAPEG00000010661	parn	94	88.595	ENSORLG00020010313	parn	73	88.595	Oryzias_latipes_hni
ENSAPEG00000010661	parn	94	88.187	ENSORLG00015000300	parn	73	88.187	Oryzias_latipes_hsok
ENSAPEG00000010661	parn	94	87.780	ENSOMEG00000019555	parn	73	87.780	Oryzias_melastigma
ENSAPEG00000010661	parn	83	78.291	ENSOGAG00000014626	PARN	87	78.291	Otolemur_garnettii
ENSAPEG00000010661	parn	83	79.493	ENSOARG00000007574	PARN	88	79.493	Ovis_aries
ENSAPEG00000010661	parn	91	77.568	ENSPPAG00000031438	PARN	74	77.568	Pan_paniscus
ENSAPEG00000010661	parn	91	78.224	ENSPPRG00000018583	PARN	74	78.224	Panthera_pardus
ENSAPEG00000010661	parn	91	78.224	ENSPTIG00000012135	PARN	74	78.224	Panthera_tigris_altaica
ENSAPEG00000010661	parn	91	77.568	ENSPTRG00000007792	PARN	74	77.568	Pan_troglodytes
ENSAPEG00000010661	parn	91	75.262	ENSPANG00000020099	PARN	74	75.681	Papio_anubis
ENSAPEG00000010661	parn	93	80.533	ENSPKIG00000022807	parn	77	75.911	Paramormyrops_kingsleyae
ENSAPEG00000010661	parn	92	77.207	ENSPSIG00000014804	PARN	84	77.207	Pelodiscus_sinensis
ENSAPEG00000010661	parn	94	84.848	ENSPMGG00000014431	parn	68	85.051	Periophthalmus_magnuspinnatus
ENSAPEG00000010661	parn	91	74.153	ENSPEMG00000018439	Parn	74	74.153	Peromyscus_maniculatus_bairdii
ENSAPEG00000010661	parn	91	67.505	ENSPMAG00000003956	parn	89	67.505	Petromyzon_marinus
ENSAPEG00000010661	parn	69	70.845	ENSPCIG00000001259	PARN	78	70.572	Phascolarctos_cinereus
ENSAPEG00000010661	parn	95	88.176	ENSPFOG00000012823	parn	73	88.176	Poecilia_formosa
ENSAPEG00000010661	parn	95	88.377	ENSPLAG00000006395	parn	73	88.377	Poecilia_latipinna
ENSAPEG00000010661	parn	95	87.976	ENSPMEG00000007711	parn	73	87.976	Poecilia_mexicana
ENSAPEG00000010661	parn	95	87.976	ENSPREG00000000147	parn	73	87.976	Poecilia_reticulata
ENSAPEG00000010661	parn	91	77.568	ENSPPYG00000007123	PARN	74	77.568	Pongo_abelii
ENSAPEG00000010661	parn	93	65.779	ENSPCAG00000001741	PARN	80	65.779	Procavia_capensis
ENSAPEG00000010661	parn	93	73.156	ENSPCOG00000019292	PARN	75	73.156	Propithecus_coquereli
ENSAPEG00000010661	parn	91	75.264	ENSPVAG00000002547	PARN	74	75.264	Pteropus_vampyrus
ENSAPEG00000010661	parn	94	94.479	ENSPNYG00000006835	parn	90	83.865	Pundamilia_nyererei
ENSAPEG00000010661	parn	91	84.421	ENSPNAG00000018905	parn	78	84.421	Pygocentrus_nattereri
ENSAPEG00000010661	parn	50	30.258	ENSRNOG00000023140	Pnldc1	71	30.258	Rattus_norvegicus
ENSAPEG00000010661	parn	95	73.535	ENSRNOG00000002912	Parn	96	78.571	Rattus_norvegicus
ENSAPEG00000010661	parn	91	75.891	ENSSBOG00000034726	PARN	74	75.891	Saimiri_boliviensis_boliviensis
ENSAPEG00000010661	parn	69	78.788	ENSSHAG00000008493	PARN	81	78.788	Sarcophilus_harrisii
ENSAPEG00000010661	parn	94	80.612	ENSSFOG00015014165	parn	79	78.838	Scleropages_formosus
ENSAPEG00000010661	parn	94	90.041	ENSSMAG00000000685	parn	90	78.495	Scophthalmus_maximus
ENSAPEG00000010661	parn	94	93.915	ENSSDUG00000014555	parn	72	94.726	Seriola_dumerili
ENSAPEG00000010661	parn	83	79.446	ENSSARG00000014339	PARN	75	79.446	Sorex_araneus
ENSAPEG00000010661	parn	91	78.013	ENSSPUG00000007719	PARN	74	78.013	Sphenodon_punctatus
ENSAPEG00000010661	parn	50	30.627	ENSSPUG00000004627	PNLDC1	91	30.603	Sphenodon_punctatus
ENSAPEG00000010661	parn	94	97.137	ENSSPAG00000007095	parn	90	82.459	Stegastes_partitus
ENSAPEG00000010661	parn	93	76.025	ENSSSCG00000007878	PARN	68	76.025	Sus_scrofa
ENSAPEG00000010661	parn	91	77.378	ENSTGUG00000004971	PARN	74	77.801	Taeniopygia_guttata
ENSAPEG00000010661	parn	94	89.271	ENSTNIG00000008252	parn	78	90.081	Tetraodon_nigroviridis
ENSAPEG00000010661	parn	91	65.751	ENSTBEG00000010407	PARN	81	65.751	Tupaia_belangeri
ENSAPEG00000010661	parn	83	78.753	ENSTTRG00000002843	PARN	68	78.753	Tursiops_truncatus
ENSAPEG00000010661	parn	83	70.938	ENSUAMG00000008283	PARN	94	67.277	Ursus_americanus
ENSAPEG00000010661	parn	91	78.436	ENSUMAG00000004527	PARN	74	78.436	Ursus_maritimus
ENSAPEG00000010661	parn	91	74.207	ENSVPAG00000008968	PARN	77	74.207	Vicugna_pacos
ENSAPEG00000010661	parn	91	78.013	ENSVVUG00000019509	PARN	74	78.013	Vulpes_vulpes
ENSAPEG00000010661	parn	91	75.000	ENSXETG00000010994	parn	88	74.946	Xenopus_tropicalis
ENSAPEG00000010661	parn	94	83.333	ENSXCOG00000015990	parn	83	83.333	Xiphophorus_couchianus
ENSAPEG00000010661	parn	95	87.776	ENSXMAG00000014783	parn	73	87.776	Xiphophorus_maculatus